RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 RPAP1Q9BWH6 1393 aaPredicted RBP28.54■■■□□ 2.16
HOXA4-204ENST00000610970 A0A0D9SFI3 127 aa28.54■■■□□ 2.16
HOXA4-204ENST00000610970 TCIRG1Q13488 830 aa28.54■■■□□ 2.16
HOXA4-204ENST00000610970 FAM43AQ8N2R8 423 aa28.54■■■□□ 2.16
HOXA4-204ENST00000610970 SLC27A2O14975 620 aa28.53■■■□□ 2.16
HOXA4-204ENST00000610970 ZBTB3Q9H5J0 574 aa28.53■■■□□ 2.16
HOXA4-204ENST00000610970 DISP2A7MBM2 1401 aa28.53■■■□□ 2.16
HOXA4-204ENST00000610970 STARD3NLO95772 234 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 ANKRD1Q15327 319 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 ATG9AQ7Z3C6 839 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 PLCH1Q4KWH8 1693 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 USPL1Q5W0Q7 1092 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 GAS2L3Q86XJ1 694 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 DBNDD2Q9BQY9 259 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 BTG4Q9NY30 223 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 CHMP3Q9Y3E7 222 aa28.52■■■□□ 2.16
HOXA4-204ENST00000610970 EYA2O00167 538 aa28.51■■■□□ 2.15
HOXA4-204ENST00000610970 ADCK5Q3MIX3 580 aa28.51■■■□□ 2.15
HOXA4-204ENST00000610970 KIF6Q6ZMV9 814 aa28.51■■■□□ 2.15
HOXA4-204ENST00000610970 SMC3Q9UQE7 1217 aa28.51■■■□□ 2.15
HOXA4-204ENST00000610970 COL22A1Q8NFW1 1626 aaPredicted RBP28.5■■■□□ 2.15
HOXA4-204ENST00000610970 KRT32Q14532 448 aa28.5■■■□□ 2.15
HOXA4-204ENST00000610970 TAF5LO75529 589 aa28.49■■■□□ 2.15
HOXA4-204ENST00000610970 PIGBQ92521 554 aa28.49■■■□□ 2.15
HOXA4-204ENST00000610970 PLA2G12BQ9BX93 195 aa28.49■■■□□ 2.15
HOXA4-204ENST00000610970 ITGB4P16144 1822 aa28.49■■■□□ 2.15
HOXA4-204ENST00000610970 NCLP19338 710 aaKnown RBP28.49■■■□□ 2.15
HOXA4-204ENST00000610970 PALLDQ8WX93 1383 aa28.48■■■□□ 2.15
HOXA4-204ENST00000610970 SPEF2Q9C093 1822 aa28.48■■■□□ 2.15
HOXA4-204ENST00000610970 PCCAP05165 728 aaPredicted RBP28.48■■■□□ 2.15
HOXA4-204ENST00000610970 CAVIN1Q6NZI2 390 aaKnown RBP28.48■■■□□ 2.15
HOXA4-204ENST00000610970 KBTBD3Q8NAB2 608 aa28.48■■■□□ 2.15
HOXA4-204ENST00000610970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.48■■■□□ 2.15
HOXA4-204ENST00000610970 ARXQ96QS3 562 aa28.48■■■□□ 2.15
HOXA4-204ENST00000610970 ATP6V1DQ9Y5K8 247 aa28.48■■■□□ 2.15
HOXA4-204ENST00000610970 U3KPZ7 1027 aaPredicted RBP28.47■■■□□ 2.15
HOXA4-204ENST00000610970 ZSCAN23Q3MJ62 389 aa28.46■■■□□ 2.15
HOXA4-204ENST00000610970 MCMDC2Q4G0Z9 681 aa28.46■■■□□ 2.15
HOXA4-204ENST00000610970 BLOC1S2Q6QNY1 142 aa28.46■■■□□ 2.15
HOXA4-204ENST00000610970 GPT2Q8TD30 523 aa28.46■■■□□ 2.15
HOXA4-204ENST00000610970 PANK2Q9BZ23 570 aa28.46■■■□□ 2.15
HOXA4-204ENST00000610970 ZNF609O15014 1411 aa28.46■■■□□ 2.15
HOXA4-204ENST00000610970 SH3TC1Q8TE82 1336 aa28.46■■■□□ 2.15
HOXA4-204ENST00000610970 ZSCAN22P10073 491 aaPredicted RBP28.46■■■□□ 2.15
HOXA4-204ENST00000610970 STX6O43752 255 aa28.45■■■□□ 2.14
HOXA4-204ENST00000610970 HSP90AB3PQ58FF7 597 aa28.45■■■□□ 2.14
HOXA4-204ENST00000610970 DNAJC10Q8IXB1 793 aa28.45■■■□□ 2.14
HOXA4-204ENST00000610970 TMEM87AQ8NBN3 555 aa28.45■■■□□ 2.14
HOXA4-204ENST00000610970 ASAP1Q9ULH1 1129 aa28.45■■■□□ 2.14
HOXA4-204ENST00000610970 BCL9O00512 1426 aa28.44■■■□□ 2.14
HOXA4-204ENST00000610970 FOXD4L5Q5VV16 416 aaPredicted RBP28.44■■■□□ 2.14
HOXA4-204ENST00000610970 FOXD4L4Q8WXT5 416 aaPredicted RBP28.44■■■□□ 2.14
HOXA4-204ENST00000610970 DNAJC2Q99543 621 aaKnown RBP28.44■■■□□ 2.14
HOXA4-204ENST00000610970 HELLSQ9NRZ9 838 aa28.44■■■□□ 2.14
HOXA4-204ENST00000610970 MAP3K15Q6ZN16 1313 aa28.44■■■□□ 2.14
HOXA4-204ENST00000610970 CPA1P15085 419 aa28.43■■■□□ 2.14
HOXA4-204ENST00000610970 RPS6KB1P23443 525 aa28.43■■■□□ 2.14
HOXA4-204ENST00000610970 ZNF589Q86UQ0 364 aaPredicted RBP28.43■■■□□ 2.14
HOXA4-204ENST00000610970 AKAP2Q9Y2D5 859 aa28.43■■■□□ 2.14
HOXA4-204ENST00000610970 CDHR2Q9BYE9 1310 aa28.43■■■□□ 2.14
HOXA4-204ENST00000610970 CCDC57Q2TAC2 916 aa28.43■■■□□ 2.14
HOXA4-204ENST00000610970 ZBTB38Q8NAP3 1195 aaPredicted RBP28.43■■■□□ 2.14
HOXA4-204ENST00000610970 SYAP1Q96A49 352 aaPredicted RBP28.43■■■□□ 2.14
HOXA4-204ENST00000610970 NEUROD6Q96NK8 337 aa28.43■■■□□ 2.14
HOXA4-204ENST00000610970 SYT1P21579 422 aa28.42■■■□□ 2.14
HOXA4-204ENST00000610970 GIGYF2Q6Y7W6 1299 aaKnown RBP28.42■■■□□ 2.14
HOXA4-204ENST00000610970 EDC3Q96F86 508 aaKnown RBP28.42■■■□□ 2.14
HOXA4-204ENST00000610970 CEP126Q9P2H0 1117 aa28.42■■■□□ 2.14
HOXA4-204ENST00000610970 CDCA7Q9BWT1 371 aaPredicted RBP28.41■■■□□ 2.14
HOXA4-204ENST00000610970 PAG1Q9NWQ8 432 aa28.41■■■□□ 2.14
HOXA4-204ENST00000610970 WNK3Q9BYP7 1800 aa28.41■■■□□ 2.14
HOXA4-204ENST00000610970 EXOC5O00471 708 aa28.4■■■□□ 2.14
HOXA4-204ENST00000610970 CSF1RP07333 972 aa28.4■■■□□ 2.14
HOXA4-204ENST00000610970 LRRFIP1Q32MZ4 808 aaKnown RBP28.4■■■□□ 2.14
HOXA4-204ENST00000610970 CCDC83Q8IWF9 413 aa28.4■■■□□ 2.14
HOXA4-204ENST00000610970 LARGE1O95461 756 aa28.4■■■□□ 2.14
HOXA4-204ENST00000610970 ME3Q16798 604 aa28.39■■■□□ 2.14
HOXA4-204ENST00000610970 ANP32BQ92688 251 aaKnown RBP28.39■■■□□ 2.14
HOXA4-204ENST00000610970 F13A1P00488 732 aa28.38■■■□□ 2.13
HOXA4-204ENST00000610970 GJB2P29033 226 aa28.38■■■□□ 2.13
HOXA4-204ENST00000610970 CSPP1Q1MSJ5 1256 aa28.38■■■□□ 2.13
HOXA4-204ENST00000610970 LRRC24Q50LG9 513 aa28.38■■■□□ 2.13
HOXA4-204ENST00000610970 KLHL34Q8N239 644 aa28.38■■■□□ 2.13
HOXA4-204ENST00000610970 A0A1B0GUL7 405 aa28.38■■■□□ 2.13
HOXA4-204ENST00000610970 NASPP49321 788 aaPredicted RBP28.38■■■□□ 2.13
HOXA4-204ENST00000610970 TPCN1Q9ULQ1 816 aa28.38■■■□□ 2.13
HOXA4-204ENST00000610970 PDCP20941 246 aa28.37■■■□□ 2.13
HOXA4-204ENST00000610970 TIMM10P62072 90 aa28.37■■■□□ 2.13
HOXA4-204ENST00000610970 DDX46Q7L014 1031 aaKnown RBP28.37■■■□□ 2.13
HOXA4-204ENST00000610970 DSCC1Q9BVC3 393 aa28.37■■■□□ 2.13
HOXA4-204ENST00000610970 ABCC12Q96J65 1359 aa28.37■■■□□ 2.13
HOXA4-204ENST00000610970 ANKRD36CQ5JPF3 1778 aa28.37■■■□□ 2.13
HOXA4-204ENST00000610970 IFIT1P09914 478 aaKnown RBP28.36■■■□□ 2.13
HOXA4-204ENST00000610970 CYP19A1P11511 503 aaPredicted RBP28.36■■■□□ 2.13
HOXA4-204ENST00000610970 CCDC173Q0VFZ6 552 aa28.36■■■□□ 2.13
HOXA4-204ENST00000610970 LRSAM1Q6UWE0 723 aa28.36■■■□□ 2.13
HOXA4-204ENST00000610970 ZNF594Q96JF6 807 aaPredicted RBP28.36■■■□□ 2.13
HOXA4-204ENST00000610970 LARP6Q9BRS8 491 aaKnown RBP28.36■■■□□ 2.13
HOXA4-204ENST00000610970 HMGB1P09429 215 aaKnown RBP28.35■■■□□ 2.13
HOXA4-204ENST00000610970 ZMYM1Q5SVZ6 1142 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms