RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RNF41Q9H4P4 317 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-218ENST00000610726 HMG20BQ9P0W2 317 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 CCNL1Q9UK58 526 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-218ENST00000610726 ERBB3P21860 1342 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 SH3TC1Q8TE82 1336 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 A0A1B0GUL7 405 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 GOLGA8AA7E2F4 631 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 SMC2O95347 1197 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 ZFYP08048 801 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-218ENST00000610726 ITGA6P23229 1130 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 TMEM67Q5HYA8 995 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 MFSD6Q6ZSS7 791 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 CHST3Q7LGC8 479 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 PDILTQ8N807 584 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 NCOA7Q8NI08 942 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 IPO7O95373 1038 aaKnown RBP8.53□□□□□ -1.04
CSDE1-218ENST00000610726 CPA1P15085 419 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 ST5P78524 1137 aa8.53□□□□□ -1.04
CSDE1-218ENST00000610726 F8W031 263 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-218ENST00000610726 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-218ENST00000610726 HMGN5P82970 282 aaKnown RBP8.52□□□□□ -1.05
CSDE1-218ENST00000610726 NOL7Q9UMY1 257 aaKnown RBP8.52□□□□□ -1.05
CSDE1-218ENST00000610726 CCDC196A0A1B0GTZ2 297 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 ERVV-2B6SEH9 535 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 BAG4O95429 457 aaKnown RBP8.52□□□□□ -1.05
CSDE1-218ENST00000610726 FAM43AQ8N2R8 423 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 WASF1Q92558 559 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 USP26Q9BXU7 913 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 ZNF287Q9HBT7 754 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 ORC3Q9UBD5 711 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-218ENST00000610726 TRPM1Q7Z4N2 1603 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 TSPY2A6NKD2 308 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 NEURL1BA8MQ27 555 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 MIGA1Q8NAN2 632 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 USP21Q9UK80 565 aa8.52□□□□□ -1.05
CSDE1-218ENST00000610726 KLF18A0A0U1RQI7 1052 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 LDHCP07864 332 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 TNNI3KQ59H18 835 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 SCAND2PQ9GZW5 306 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-218ENST00000610726 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 SLC4A4Q9Y6R1 1079 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 FPGT-TNNI3KV9GXZ4 949 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 PDIA4P13667 645 aaKnown RBP8.51□□□□□ -1.05
CSDE1-218ENST00000610726 MCM5P33992 734 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 ANAPC15P60006 121 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 RTL1A6NKG5 1358 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 CROCC2H7BZ55 1655 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 SPHKAPQ2M3C7 1700 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 BAG3O95817 575 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 IARSP41252 1262 aaKnown RBP8.51□□□□□ -1.05
CSDE1-218ENST00000610726 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 NAA16Q6N069 864 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-218ENST00000610726 NOC3LQ8WTT2 800 aaKnown RBP8.51□□□□□ -1.05
CSDE1-218ENST00000610726 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 ZHX3Q9H4I2 956 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 STX8Q9UNK0 236 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 ALKQ9UM73 1620 aa8.51□□□□□ -1.05
CSDE1-218ENST00000610726 ZNF853P0CG23 659 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 CCDC129Q6ZRS4 1044 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 BRINP3Q76B58 766 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 ZGPATQ8N5A5 531 aaKnown RBP8.5□□□□□ -1.05
CSDE1-218ENST00000610726 E9PCH4 1651 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 SETD1BQ9UPS6 1966 aaKnown RBP8.5□□□□□ -1.05
CSDE1-218ENST00000610726 RNF113AO15541 343 aaKnown RBP8.5□□□□□ -1.05
CSDE1-218ENST00000610726 TAF5LO75529 589 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 SSBP05455 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
CSDE1-218ENST00000610726 KRT18P05783 430 aaKnown RBP8.5□□□□□ -1.05
CSDE1-218ENST00000610726 METAP2P50579 478 aaKnown RBP eCLIP8.5□□□□□ -1.051e-12■□□□□ 10.3
CSDE1-218ENST00000610726 BEND3Q5T5X7 828 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 CREB3L3Q68CJ9 461 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 Q6ZUG5 572 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 EDC3Q96F86 508 aaKnown RBP8.5□□□□□ -1.05
CSDE1-218ENST00000610726 NYXQ9GZU5 481 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 DTNBO60941 627 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 MAP3K11Q16584 847 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 CATIPQ7Z7H3 387 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 FAM227BQ96M60 508 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 AK2P54819 239 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 TCIRG1Q13488 830 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 SPTY2D1Q68D10 685 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-218ENST00000610726 CKAP2LQ8IYA6 745 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 MAGEB6Q8N7X4 407 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 VAT1LQ9HCJ6 419 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 CCDC39Q9UFE4 941 aa8.5□□□□□ -1.05
CSDE1-218ENST00000610726 SERPINC1P01008 464 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 SLF2Q8IX21 1173 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 CEP89Q96ST8 783 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 SLC26A6Q9BXS9 759 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 CRNKL1Q9BZJ0 848 aaKnown RBP8.49□□□□□ -1.05
CSDE1-218ENST00000610726 CEP152O94986 1710 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 PDE8AO60658 829 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 PDE4BQ07343 736 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 SSRP1Q08945 709 aaKnown RBP8.49□□□□□ -1.05
CSDE1-218ENST00000610726 SSH3Q8TE77 659 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 XAGE2Q96GT9 111 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms