RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ZSWIM6Q9HCJ5 1215 aa14.36□□□□□ -0.11
USP6NL-206ENST00000609853 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
USP6NL-206ENST00000609853 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
USP6NL-206ENST00000609853 NWD2Q9ULI1 1742 aa14.36□□□□□ -0.11
USP6NL-206ENST00000609853 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 ERVV-1B6SEH8 477 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 KCNJ4P48050 445 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 CCDC57Q2TAC2 916 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 KLHL40Q2TBA0 621 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 TSGA10IPQ3SY00 556 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 FAM227BQ96M60 508 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.35□□□□□ -0.11
USP6NL-206ENST00000609853 RBM8AQ9Y5S9 174 aaKnown RBP14.35□□□□□ -0.11
USP6NL-206ENST00000609853 BRD1O95696 1058 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
USP6NL-206ENST00000609853 CASTP20810 708 aaKnown RBP14.35□□□□□ -0.11
USP6NL-206ENST00000609853 IL6STP40189 918 aaPredicted RBP14.35□□□□□ -0.11
USP6NL-206ENST00000609853 PRPF40BQ6NWY9 871 aaKnown RBP14.35□□□□□ -0.11
USP6NL-206ENST00000609853 DBNDD2Q9BQY9 259 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 ALDH8A1Q9H2A2 487 aaPredicted RBP14.35□□□□□ -0.11
USP6NL-206ENST00000609853 SH2B1Q9NRF2 756 aaPredicted RBP14.35□□□□□ -0.11
USP6NL-206ENST00000609853 AKAP2Q9Y2D5 859 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 SPATA31A1Q5TZJ5 1347 aa14.35□□□□□ -0.11
USP6NL-206ENST00000609853 CSF1RP07333 972 aa14.34□□□□□ -0.11
USP6NL-206ENST00000609853 KRT32Q14532 448 aa14.34□□□□□ -0.11
USP6NL-206ENST00000609853 CREB3L3Q68CJ9 461 aa14.34□□□□□ -0.11
USP6NL-206ENST00000609853 RUFY3Q7L099 469 aa14.34□□□□□ -0.11
USP6NL-206ENST00000609853 CEP126Q9P2H0 1117 aa14.34□□□□□ -0.11
USP6NL-206ENST00000609853 PALLDQ8WX93 1383 aa14.34□□□□□ -0.11
USP6NL-206ENST00000609853 ZNF609O15014 1411 aa14.34□□□□□ -0.11
USP6NL-206ENST00000609853 DOT1LQ8TEK3 1739 aa14.34□□□□□ -0.11
USP6NL-206ENST00000609853 MYH3P11055 1940 aa14.33□□□□□ -0.11
USP6NL-206ENST00000609853 A0A0D9SFI3 127 aa14.33□□□□□ -0.12
USP6NL-206ENST00000609853 AK2P54819 239 aa14.33□□□□□ -0.12
USP6NL-206ENST00000609853 ANKRD1Q15327 319 aa14.33□□□□□ -0.12
USP6NL-206ENST00000609853 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.12
USP6NL-206ENST00000609853 KBTBD3Q8NAB2 608 aa14.33□□□□□ -0.12
USP6NL-206ENST00000609853 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.12
USP6NL-206ENST00000609853 PDRG1Q9NUG6 133 aa14.33□□□□□ -0.12
USP6NL-206ENST00000609853 ZDHHC9Q9Y397 364 aa14.33□□□□□ -0.12
USP6NL-206ENST00000609853 NUP98P52948 1817 aa14.33□□□□□ -0.12
USP6NL-206ENST00000609853 DDB1Q16531 1140 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 LRRFIP1Q32MZ4 808 aaKnown RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 SH3TC1Q8TE82 1336 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 CICQ96RK0 1608 aaPredicted RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 RPAP1Q9BWH6 1393 aaPredicted RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 WDR33Q9C0J8 1336 aaKnown RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 ABCC12Q96J65 1359 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 SLC27A2O14975 620 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 TAF5LO75529 589 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 IFIT5Q13325 482 aaKnown RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 PKP1Q13835 747 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 MCMDC2Q4G0Z9 681 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 MCTP1Q6DN14 999 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 BARGINQ6ZT62 677 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 NLRP10Q86W26 655 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 AK7Q96M32 723 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 NEUROD6Q96NK8 337 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 HELLSQ9NRZ9 838 aa14.32□□□□□ -0.12
USP6NL-206ENST00000609853 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
USP6NL-206ENST00000609853 PRIM1P49642 420 aaKnown RBP14.31□□□□□ -0.12
USP6NL-206ENST00000609853 MRE11P49959 708 aa14.31□□□□□ -0.12
USP6NL-206ENST00000609853 SLC4A9Q96Q91 983 aa14.31□□□□□ -0.12
USP6NL-206ENST00000609853 LMBRD1Q9NUN5 540 aa14.31□□□□□ -0.12
USP6NL-206ENST00000609853 DDX49Q9Y6V7 483 aaKnown RBP14.31□□□□□ -0.12
USP6NL-206ENST00000609853 SPATA31A5Q5VU36 1347 aa14.3□□□□□ -0.12
USP6NL-206ENST00000609853 SPATA31A7Q8IWB4 1347 aa14.3□□□□□ -0.12
USP6NL-206ENST00000609853 A0A1B0GUL7 405 aa14.3□□□□□ -0.12
USP6NL-206ENST00000609853 SYTL4Q96C24 671 aaPredicted RBP14.3□□□□□ -0.12
USP6NL-206ENST00000609853 DNAJC2Q99543 621 aaKnown RBP14.3□□□□□ -0.12
USP6NL-206ENST00000609853 PAG1Q9NWQ8 432 aa14.3□□□□□ -0.12
USP6NL-206ENST00000609853 TOM1O60784 492 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 LRRC24Q50LG9 513 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 CCDC158Q5M9N0 1113 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
USP6NL-206ENST00000609853 FAM89AQ96GI7 184 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 IFIT1P09914 478 aaKnown RBP14.29□□□□□ -0.12
USP6NL-206ENST00000609853 TIMM10P62072 90 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 ADCK5Q3MIX3 580 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 ZBTB1Q9Y2K1 713 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 SLIT2O94813 1529 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 RREB1Q92766 1687 aa14.29□□□□□ -0.12
USP6NL-206ENST00000609853 ADAMTS2O95450 1211 aa14.28□□□□□ -0.12
USP6NL-206ENST00000609853 MBD3O95983 291 aa14.28□□□□□ -0.12
USP6NL-206ENST00000609853 HSP90B1P14625 803 aaKnown RBP14.28□□□□□ -0.12
USP6NL-206ENST00000609853 HLFQ16534 295 aa14.28□□□□□ -0.12
USP6NL-206ENST00000609853 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
USP6NL-206ENST00000609853 DZIP3Q86Y13 1208 aaKnown RBP14.28□□□□□ -0.12
USP6NL-206ENST00000609853 EDC3Q96F86 508 aaKnown RBP14.28□□□□□ -0.12
USP6NL-206ENST00000609853 ZNF594Q96JF6 807 aaPredicted RBP14.28□□□□□ -0.12
USP6NL-206ENST00000609853 ARXQ96QS3 562 aa14.28□□□□□ -0.12
USP6NL-206ENST00000609853 SMC3Q9UQE7 1217 aa14.28□□□□□ -0.12
USP6NL-206ENST00000609853 ATP6V1DQ9Y5K8 247 aa14.28□□□□□ -0.12
USP6NL-206ENST00000609853 ANKRD18BA2A2Z9 1011 aa14.27□□□□□ -0.12
USP6NL-206ENST00000609853 RPS6KB1P23443 525 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms