RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 RNF181Q9P0P0 153 aa18.13■□□□□ 0.49
HDDC2-209ENST00000609477 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
HDDC2-209ENST00000609477 ATP6V0A2Q9Y487 856 aa18.13■□□□□ 0.49
HDDC2-209ENST00000609477 SP8Q8IXZ3 490 aa18.12■□□□□ 0.49
HDDC2-209ENST00000609477 PLA2G12BQ9BX93 195 aa18.12■□□□□ 0.49
HDDC2-209ENST00000609477 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
HDDC2-209ENST00000609477 F6X3S4 739 aa18.11■□□□□ 0.49
HDDC2-209ENST00000609477 RASSF7Q02833 373 aa18.11■□□□□ 0.49
HDDC2-209ENST00000609477 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
HDDC2-209ENST00000609477 VPS33BQ9H267 617 aa18.11■□□□□ 0.49
HDDC2-209ENST00000609477 DICER1Q9UPY3 1922 aaKnown RBP18.11■□□□□ 0.49
HDDC2-209ENST00000609477 MYH3P11055 1940 aa18.1■□□□□ 0.49
HDDC2-209ENST00000609477 CCDC88AQ3V6T2 1871 aa18.1■□□□□ 0.49
HDDC2-209ENST00000609477 SNED1Q8TER0 1413 aa18.1■□□□□ 0.49
HDDC2-209ENST00000609477 RARSP54136 660 aaKnown RBP18.1■□□□□ 0.49
HDDC2-209ENST00000609477 UBE3BQ7Z3V4 1068 aa18.1■□□□□ 0.49
HDDC2-209ENST00000609477 RTL9Q8NET4 1388 aa18.09■□□□□ 0.49
HDDC2-209ENST00000609477 CASP7P55210 303 aa18.09■□□□□ 0.49
HDDC2-209ENST00000609477 CTSWP56202 376 aa18.09■□□□□ 0.49
HDDC2-209ENST00000609477 ARHGAP45Q92619 1136 aa18.09■□□□□ 0.49
HDDC2-209ENST00000609477 KIF16BQ96L93 1317 aa18.08■□□□□ 0.49
HDDC2-209ENST00000609477 RPS8P62241 208 aaKnown RBP18.08■□□□□ 0.48
HDDC2-209ENST00000609477 SLC4A10Q6U841 1118 aa18.08■□□□□ 0.48
HDDC2-209ENST00000609477 SUPT20HQ8NEM7 779 aa18.08■□□□□ 0.48
HDDC2-209ENST00000609477 TTLL11Q8NHH1 800 aa18.08■□□□□ 0.48
HDDC2-209ENST00000609477 GRM8O00222 908 aa18.07■□□□□ 0.48
HDDC2-209ENST00000609477 PRELPP51888 382 aa18.07■□□□□ 0.48
HDDC2-209ENST00000609477 BCL2L13Q9BXK5 485 aa18.07■□□□□ 0.48
HDDC2-209ENST00000609477 RTFDC1Q9BY42 306 aaPredicted RBP18.07■□□□□ 0.48
HDDC2-209ENST00000609477 API5Q9BZZ5 524 aaKnown RBP18.07■□□□□ 0.48
HDDC2-209ENST00000609477 GPBP1L1Q9HC44 474 aaPredicted RBP18.07■□□□□ 0.48
HDDC2-209ENST00000609477 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
HDDC2-209ENST00000609477 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
HDDC2-209ENST00000609477 CSF1RP07333 972 aa18.06■□□□□ 0.48
HDDC2-209ENST00000609477 OLFM4Q6UX06 510 aa18.06■□□□□ 0.48
HDDC2-209ENST00000609477 JARID2Q92833 1246 aaPredicted RBP18.06■□□□□ 0.48
HDDC2-209ENST00000609477 CELF1Q92879 486 aaKnown RBP18.06■□□□□ 0.48
HDDC2-209ENST00000609477 CDC5LQ99459 802 aaKnown RBP18.06■□□□□ 0.48
HDDC2-209ENST00000609477 LRRC37AA6NMS7 1700 aa18.06■□□□□ 0.48
HDDC2-209ENST00000609477 UTYO14607 1347 aa18.05■□□□□ 0.48
HDDC2-209ENST00000609477 IPO8O15397 1037 aaKnown RBP18.05■□□□□ 0.48
HDDC2-209ENST00000609477 IARSP41252 1262 aaKnown RBP18.05■□□□□ 0.48
HDDC2-209ENST00000609477 DPY19L2Q6NUT2 758 aa18.05■□□□□ 0.48
HDDC2-209ENST00000609477 MPNDQ8N594 471 aa18.05■□□□□ 0.48
HDDC2-209ENST00000609477 NOB1Q9ULX3 412 aaKnown RBP18.05■□□□□ 0.48
HDDC2-209ENST00000609477 TIAM2Q8IVF5 1701 aa18.05■□□□□ 0.48
HDDC2-209ENST00000609477 TAF1P21675 1872 aa18.04■□□□□ 0.48
HDDC2-209ENST00000609477 GLTPD2A6NH11 291 aa18.04■□□□□ 0.48
HDDC2-209ENST00000609477 CCT4P50991 539 aaKnown RBP18.04■□□□□ 0.48
HDDC2-209ENST00000609477 DPP8Q6V1X1 898 aaPredicted RBP18.04■□□□□ 0.48
HDDC2-209ENST00000609477 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
HDDC2-209ENST00000609477 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
HDDC2-209ENST00000609477 SEC31BQ9NQW1 1179 aa18.03■□□□□ 0.48
HDDC2-209ENST00000609477 ZNF277Q9NRM2 450 aaPredicted RBP18.03■□□□□ 0.48
HDDC2-209ENST00000609477 GREM2Q9H772 168 aa18.02■□□□□ 0.48
HDDC2-209ENST00000609477 BSDC1Q9NW68 430 aaPredicted RBP18.02■□□□□ 0.48
HDDC2-209ENST00000609477 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
HDDC2-209ENST00000609477 FOXO4P98177 505 aa18.01■□□□□ 0.47
HDDC2-209ENST00000609477 HDAC5Q9UQL6 1122 aa18.01■□□□□ 0.47
HDDC2-209ENST00000609477 FZD9O00144 591 aa18■□□□□ 0.47
HDDC2-209ENST00000609477 IGHMBP2P38935 993 aaKnown RBP18■□□□□ 0.47
HDDC2-209ENST00000609477 NSFL1CQ9UNZ2 370 aaKnown RBP18■□□□□ 0.47
HDDC2-209ENST00000609477 ANKRD18BA2A2Z9 1011 aa17.99■□□□□ 0.47
HDDC2-209ENST00000609477 ITGA6P23229 1130 aa17.99■□□□□ 0.47
HDDC2-209ENST00000609477 IFIT5Q13325 482 aaKnown RBP17.99■□□□□ 0.47
HDDC2-209ENST00000609477 LARGE2Q8N3Y3 721 aa17.99■□□□□ 0.47
HDDC2-209ENST00000609477 ZNF526Q8TF50 670 aaPredicted RBP17.99■□□□□ 0.47
HDDC2-209ENST00000609477 CCDC85AQ96PX6 553 aaPredicted RBP17.99■□□□□ 0.47
HDDC2-209ENST00000609477 EYA3Q99504 573 aa17.99■□□□□ 0.47
HDDC2-209ENST00000609477 USP44Q9H0E7 712 aa17.99■□□□□ 0.47
HDDC2-209ENST00000609477 PPIP5K2O43314 1243 aa17.98■□□□□ 0.47
HDDC2-209ENST00000609477 NBPF7P0C2Y1 421 aaPredicted RBP17.98■□□□□ 0.47
HDDC2-209ENST00000609477 KIAA2012Q0VF49 1180 aa17.98■□□□□ 0.47
HDDC2-209ENST00000609477 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
HDDC2-209ENST00000609477 XDHP47989 1333 aa17.98■□□□□ 0.47
HDDC2-209ENST00000609477 BCAR3O75815 825 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 WASHC4Q2M389 1173 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 CCDC57Q2TAC2 916 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 FAM161AQ3B820 660 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
HDDC2-209ENST00000609477 LMBR1LQ6UX01 489 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 NIM1KQ8IY84 436 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 MPHOSPH8Q99549 860 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
HDDC2-209ENST00000609477 WDR90Q96KV7 1748 aa17.96■□□□□ 0.47
HDDC2-209ENST00000609477 VEGFAP15692 232 aaPredicted RBP17.96■□□□□ 0.47
HDDC2-209ENST00000609477 EIF6P56537 245 aaKnown RBP17.96■□□□□ 0.47
HDDC2-209ENST00000609477 GPSM2P81274 684 aa17.96■□□□□ 0.47
HDDC2-209ENST00000609477 RABL6Q3YEC7 729 aaPredicted RBP17.96■□□□□ 0.47
HDDC2-209ENST00000609477 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
HDDC2-209ENST00000609477 ANKRD2Q9GZV1 360 aa17.96■□□□□ 0.47
HDDC2-209ENST00000609477 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.47
HDDC2-209ENST00000609477 COL4A1P02462 1669 aa17.96■□□□□ 0.47
HDDC2-209ENST00000609477 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.46
HDDC2-209ENST00000609477 C6orf229H3BNL8 230 aa17.95■□□□□ 0.46
HDDC2-209ENST00000609477 KIF3CO14782 793 aa17.95■□□□□ 0.46
HDDC2-209ENST00000609477 TRIM27P14373 513 aa17.95■□□□□ 0.46
HDDC2-209ENST00000609477 AOC3Q16853 763 aa17.95■□□□□ 0.46
HDDC2-209ENST00000609477 EPHA10Q5JZY3 1008 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms