RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 RMND1Q9NWS8 449 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 PABPN1LA6NDY0 278 aaKnown RBP14.93□□□□□ -0.02
USP6NL-205ENST00000609104 IVLP07476 585 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 MICALL1Q8N3F8 863 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 RRAGBQ5VZM2 374 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 ANKLE2Q86XL3 938 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 ZMYND15Q9H091 742 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 SKILP12757 684 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 ANKS4BQ8N8V4 417 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 IQCGQ9H095 443 aaKnown RBP14.93□□□□□ -0.02
USP6NL-205ENST00000609104 LRPPRCP42704 1394 aaKnown RBP14.92□□□□□ -0.02
USP6NL-205ENST00000609104 KRT13P13646 458 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 KLHL40Q2TBA0 621 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 ZNF354CQ86Y25 554 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 CTAGE1Q96RT6 745 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 LRRC2Q9BYS8 371 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 CCDC172P0C7W6 258 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 ARID5AQ03989 594 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 SSX2IPQ9Y2D8 614 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 CTAGE15A4D2H0 777 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 CTAGE8P0CG41 777 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 CTAGE6Q86UF2 777 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 CTAGE4Q8IX94 777 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 IGHDP01880 384 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 TMX3Q96JJ7 454 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 ECHDC1Q9NTX5 307 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 CCDC63Q8NA47 563 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP6NL-205ENST00000609104 V9GYY5 206 aaPredicted RBP14.92□□□□□ -0.02
USP6NL-205ENST00000609104 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 JARID2Q92833 1246 aaPredicted RBP14.92□□□□□ -0.02
USP6NL-205ENST00000609104 PLVAPQ9BX97 442 aa14.92□□□□□ -0.02
USP6NL-205ENST00000609104 GSTA5Q7RTV2 222 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 AMOTQ4VCS5 1084 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 TBC1D32Q96NH3 1257 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 SELENOSQ9BQE4 189 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 LRRC27Q9C0I9 530 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 ATP5J2-PTCD1G3V325 749 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 AOPEPQ8N6M6 819 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 ZBTB16Q05516 673 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 TTC22Q5TAA0 569 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 LDHAL6AQ6ZMR3 332 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 DDX12PQ92771 950 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 RASAL2Q9UJF2 1139 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 ALG1Q9BT22 464 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 IFIT1BQ5T764 474 aaKnown RBP14.91□□□□□ -0.02
USP6NL-205ENST00000609104 DBF4Q9UBU7 674 aaPredicted RBP14.91□□□□□ -0.02
USP6NL-205ENST00000609104 FLIIQ13045 1269 aa14.91□□□□□ -0.02
USP6NL-205ENST00000609104 C6orf229H3BNL8 230 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 TBCAO75347 108 aaKnown RBP14.9□□□□□ -0.02
USP6NL-205ENST00000609104 MRPS9P82933 396 aaKnown RBP14.9□□□□□ -0.02
USP6NL-205ENST00000609104 CAPZA3Q96KX2 299 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 CAVIN2O95810 425 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 HMG20BQ9P0W2 317 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 MARCKSP29966 332 aaPredicted RBP14.9□□□□□ -0.02
USP6NL-205ENST00000609104 ABCC11Q96J66 1382 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 PPP1R42Q7Z4L9 355 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 TTC12Q9H892 705 aaPredicted RBP14.9□□□□□ -0.02
USP6NL-205ENST00000609104 OPA1O60313 960 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 ZBTB3Q9H5J0 574 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 DAPK1P53355 1430 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 WTAPQ15007 396 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 BMP2KLQ5H9B9 411 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 CCDC186Q7Z3E2 898 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 CWC25Q9NXE8 425 aaPredicted RBP14.9□□□□□ -0.02
USP6NL-205ENST00000609104 VPS18Q9P253 973 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 TIAM1Q13009 1591 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 SYT1P21579 422 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 PSMC4P43686 418 aa14.9□□□□□ -0.02
USP6NL-205ENST00000609104 SMIM23A6NLE4 172 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 BAG3O95817 575 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 GOLGA1Q92805 767 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 KLF18A0A0U1RQI7 1052 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 OTUD6BQ8N6M0 293 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 RPGRIP1LQ68CZ1 1315 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 CAPN2P17655 700 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 CCDC129Q6ZRS4 1044 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 CEP57Q86XR8 500 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 RAB3IL1Q8TBN0 382 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 NME9Q86XW9 330 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 SPAG5Q96R06 1193 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 DNAJC25Q9H1X3 360 aa14.89□□□□□ -0.03
USP6NL-205ENST00000609104 MRVI1Q9Y6F6 885 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 ZEB2O60315 1214 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 DNAJC21Q5F1R6 531 aaKnown RBP14.88□□□□□ -0.03
USP6NL-205ENST00000609104 STX8Q9UNK0 236 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 KCNG4Q8TDN1 519 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 ZBTB43O43298 467 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 GJC1P36383 396 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 HEATR3Q7Z4Q2 680 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 PHACTR2O75167 634 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 NBPF7P0C2Y1 421 aaPredicted RBP14.88□□□□□ -0.03
USP6NL-205ENST00000609104 TSPY3P0CV98 308 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 TSPY8P0CW00 308 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 Q6ZUG5 572 aa14.88□□□□□ -0.03
USP6NL-205ENST00000609104 DDX46Q7L014 1031 aaKnown RBP14.88□□□□□ -0.03
USP6NL-205ENST00000609104 SDSP20132 328 aa14.87□□□□□ -0.03
USP6NL-205ENST00000609104 TACC1O75410 805 aa14.87□□□□□ -0.03
USP6NL-205ENST00000609104 CCDC121Q6ZUS5 278 aa14.87□□□□□ -0.03
USP6NL-205ENST00000609104 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms