RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 GABPB1Q06547 395 aaPredicted RBP26.36■■□□□ 1.81
SHANK2-220ENST00000608988 ATL3Q6DD88 541 aa26.36■■□□□ 1.81
SHANK2-220ENST00000608988 GTF3C6Q969F1 213 aa26.36■■□□□ 1.81
SHANK2-220ENST00000608988 FSD1Q9BTV5 496 aa26.36■■□□□ 1.81
SHANK2-220ENST00000608988 HEG1Q9ULI3 1381 aa26.36■■□□□ 1.81
SHANK2-220ENST00000608988 LMTK3Q96Q04 1460 aa26.36■■□□□ 1.81
SHANK2-220ENST00000608988 LLPHQ9BRT6 129 aaKnown RBP26.36■■□□□ 1.81
SHANK2-220ENST00000608988 KCND1Q9NSA2 647 aa26.36■■□□□ 1.81
SHANK2-220ENST00000608988 CHMP3Q9Y3E7 222 aa26.36■■□□□ 1.81
SHANK2-220ENST00000608988 A0A0D9SFI3 127 aa26.35■■□□□ 1.81
SHANK2-220ENST00000608988 GOLGA6L19H0YKK7 550 aa26.35■■□□□ 1.81
SHANK2-220ENST00000608988 SASH1O94885 1247 aa26.35■■□□□ 1.81
SHANK2-220ENST00000608988 U2AF2P26368 475 aaKnown RBP eCLIP26.35■■□□□ 1.81
SHANK2-220ENST00000608988 LRMPQ12912 555 aa26.35■■□□□ 1.81
SHANK2-220ENST00000608988 EAF2Q96CJ1 260 aaPredicted RBP26.35■■□□□ 1.81
SHANK2-220ENST00000608988 PGBD1Q96JS3 809 aa26.35■■□□□ 1.81
SHANK2-220ENST00000608988 GRM8O00222 908 aa26.34■■□□□ 1.81
SHANK2-220ENST00000608988 NR1I2O75469 434 aa26.34■■□□□ 1.81
SHANK2-220ENST00000608988 TPD52L1Q16890 204 aaPredicted RBP26.34■■□□□ 1.81
SHANK2-220ENST00000608988 LTV1Q96GA3 475 aaPredicted RBP26.34■■□□□ 1.81
SHANK2-220ENST00000608988 C16orf45Q96MC5 204 aaPredicted RBP26.34■■□□□ 1.81
SHANK2-220ENST00000608988 SLC26A8Q96RN1 970 aa26.34■■□□□ 1.81
SHANK2-220ENST00000608988 LGR6Q9HBX8 967 aa26.34■■□□□ 1.81
SHANK2-220ENST00000608988 TFIP11Q9UBB9 837 aaKnown RBP26.34■■□□□ 1.81
SHANK2-220ENST00000608988 CTNNA3Q9UI47 895 aa26.34■■□□□ 1.81
SHANK2-220ENST00000608988 ZHX1Q9UKY1 873 aaPredicted RBP26.34■■□□□ 1.81
SHANK2-220ENST00000608988 PA2G4Q9UQ80 394 aaKnown RBP26.34■■□□□ 1.81
SHANK2-220ENST00000608988 DDX58O95786 925 aaKnown RBP26.34■■□□□ 1.81
SHANK2-220ENST00000608988 STX1AQ16623 288 aa26.34■■□□□ 1.81
SHANK2-220ENST00000608988 PLEKHO1Q53GL0 409 aaPredicted RBP26.34■■□□□ 1.81
SHANK2-220ENST00000608988 FAM173BQ6P4H8 233 aa26.34■■□□□ 1.81
SHANK2-220ENST00000608988 ABTB2Q8N961 1025 aa26.34■■□□□ 1.81
SHANK2-220ENST00000608988 IQCB1Q15051 598 aa26.33■■□□□ 1.81
SHANK2-220ENST00000608988 AMOTQ4VCS5 1084 aa26.33■■□□□ 1.81
SHANK2-220ENST00000608988 TAF3Q5VWG9 929 aa26.33■■□□□ 1.81
SHANK2-220ENST00000608988 CACTINQ8WUQ7 758 aaKnown RBP26.33■■□□□ 1.81
SHANK2-220ENST00000608988 DNAJC25Q9H1X3 360 aa26.33■■□□□ 1.81
SHANK2-220ENST00000608988 NRBP1Q9UHY1 535 aa26.33■■□□□ 1.81
SHANK2-220ENST00000608988 NFAT5O94916 1531 aa26.33■■□□□ 1.81
SHANK2-220ENST00000608988 CEP135Q66GS9 1140 aa26.32■■□□□ 1.8
SHANK2-220ENST00000608988 NAA16Q6N069 864 aaPredicted RBP26.32■■□□□ 1.8
SHANK2-220ENST00000608988 U3KPZ7 1027 aaPredicted RBP26.32■■□□□ 1.8
SHANK2-220ENST00000608988 KIF2AO00139 706 aaPredicted RBP26.31■■□□□ 1.8
SHANK2-220ENST00000608988 TAF5LO75529 589 aa26.31■■□□□ 1.8
SHANK2-220ENST00000608988 LRRC8AQ8IWT6 810 aa26.31■■□□□ 1.8
SHANK2-220ENST00000608988 DDX54Q8TDD1 881 aaKnown RBP26.31■■□□□ 1.8
SHANK2-220ENST00000608988 DDX41Q9UJV9 622 aaKnown RBP26.31■■□□□ 1.8
SHANK2-220ENST00000608988 SPDYE4A6NLX3 237 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 SUCLG2Q96I99 432 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 MYH15Q9Y2K3 1946 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 H3BQV1 296 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 DHX8Q14562 1220 aaKnown RBP26.3■■□□□ 1.8
SHANK2-220ENST00000608988 IFFO2Q5TF58 517 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 TICAM2Q86XR7 235 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 USHBP1Q8N6Y0 703 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 SMARCC2Q8TAQ2 1214 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 BRF1Q92994 677 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 CHMP4CQ96CF2 233 aa26.3■■□□□ 1.8
SHANK2-220ENST00000608988 MORC2Q9Y6X9 1032 aaPredicted RBP26.3■■□□□ 1.8
SHANK2-220ENST00000608988 KCNQ3O43525 872 aa26.29■■□□□ 1.8
SHANK2-220ENST00000608988 ZNF530Q6P9A1 599 aaPredicted RBP26.29■■□□□ 1.8
SHANK2-220ENST00000608988 NEK1Q96PY6 1258 aa26.29■■□□□ 1.8
SHANK2-220ENST00000608988 RCOR1Q9UKL0 485 aa26.29■■□□□ 1.8
SHANK2-220ENST00000608988 CCDC8Q9H0W5 538 aaPredicted RBP26.28■■□□□ 1.8
SHANK2-220ENST00000608988 RNMTO43148 476 aaKnown RBP26.28■■□□□ 1.8
SHANK2-220ENST00000608988 HMGB1P09429 215 aaKnown RBP26.28■■□□□ 1.8
SHANK2-220ENST00000608988 NUTM2GQ5VZR2 741 aa26.28■■□□□ 1.8
SHANK2-220ENST00000608988 NYAP1Q6ZVC0 841 aa26.28■■□□□ 1.8
SHANK2-220ENST00000608988 KAZALD1Q96I82 304 aa26.28■■□□□ 1.8
SHANK2-220ENST00000608988 BOLA2Q9H3K6 86 aa26.28■■□□□ 1.8
SHANK2-220ENST00000608988 BICC1Q9H694 974 aaKnown RBP26.28■■□□□ 1.8
SHANK2-220ENST00000608988 ANXA1P04083 346 aa26.27■■□□□ 1.8
SHANK2-220ENST00000608988 ATP5JP18859 108 aa26.27■■□□□ 1.8
SHANK2-220ENST00000608988 CCDC144BQ3MJ40 725 aa26.27■■□□□ 1.8
SHANK2-220ENST00000608988 SLFNL1Q499Z3 407 aa26.27■■□□□ 1.8
SHANK2-220ENST00000608988 NBPF6Q5VWK0 638 aa26.27■■□□□ 1.8
SHANK2-220ENST00000608988 CCDC144CPQ8IYA2 1237 aa26.27■■□□□ 1.8
SHANK2-220ENST00000608988 NBPF4Q96M43 638 aa26.27■■□□□ 1.8
SHANK2-220ENST00000608988 ANO10Q9NW15 660 aa26.27■■□□□ 1.8
SHANK2-220ENST00000608988 GSDMDP57764 484 aa26.26■■□□□ 1.79
SHANK2-220ENST00000608988 FAM193AP78312 1265 aa26.26■■□□□ 1.79
SHANK2-220ENST00000608988 ZNF397Q8NF99 534 aaPredicted RBP26.26■■□□□ 1.79
SHANK2-220ENST00000608988 PTPN14Q15678 1187 aa26.25■■□□□ 1.79
SHANK2-220ENST00000608988 ZNF396Q96N95 335 aaPredicted RBP26.25■■□□□ 1.79
SHANK2-220ENST00000608988 SIPA1L3O60292 1781 aaPredicted RBP26.25■■□□□ 1.79
SHANK2-220ENST00000608988 PFKFB2O60825 505 aa26.25■■□□□ 1.79
SHANK2-220ENST00000608988 CWF19L2Q2TBE0 894 aaKnown RBP26.25■■□□□ 1.79
SHANK2-220ENST00000608988 CCDC73Q6ZRK6 1079 aa26.25■■□□□ 1.79
SHANK2-220ENST00000608988 ZNF589Q86UQ0 364 aaPredicted RBP26.25■■□□□ 1.79
SHANK2-220ENST00000608988 DDX21Q9NR30 783 aaKnown RBP eCLIP26.25■■□□□ 1.79
SHANK2-220ENST00000608988 DTNBO60941 627 aa26.24■■□□□ 1.79
SHANK2-220ENST00000608988 STK3Q13188 491 aa26.24■■□□□ 1.79
SHANK2-220ENST00000608988 KCNH5Q8NCM2 988 aa26.24■■□□□ 1.79
SHANK2-220ENST00000608988 ERO1AQ96HE7 468 aa26.24■■□□□ 1.79
SHANK2-220ENST00000608988 TCEANC2Q96MN5 208 aa26.24■■□□□ 1.79
SHANK2-220ENST00000608988 JAK2O60674 1132 aa26.23■■□□□ 1.79
SHANK2-220ENST00000608988 TUBB4AP04350 444 aa26.23■■□□□ 1.79
SHANK2-220ENST00000608988 C1orf141Q5JVX7 400 aa26.23■■□□□ 1.79
SHANK2-220ENST00000608988 NAT10Q9H0A0 1025 aaKnown RBP26.23■■□□□ 1.79
SHANK2-220ENST00000608988 IMPACTQ9P2X3 320 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms