RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
PRDM16-210ENST00000607632 SLC51AQ86UW1 340 aa18.32■□□□□ 0.52
PRDM16-210ENST00000607632 SP8Q8IXZ3 490 aa18.32■□□□□ 0.52
PRDM16-210ENST00000607632 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
PRDM16-210ENST00000607632 CDCA7LQ96GN5 454 aa18.32■□□□□ 0.52
PRDM16-210ENST00000607632 LTBP1Q14766 1721 aa18.32■□□□□ 0.52
PRDM16-210ENST00000607632 H7C1W4 665 aa18.31■□□□□ 0.52
PRDM16-210ENST00000607632 PDE8AO60658 829 aa18.31■□□□□ 0.52
PRDM16-210ENST00000607632 CWF19L2Q2TBE0 894 aaKnown RBP18.31■□□□□ 0.52
PRDM16-210ENST00000607632 LINS1Q8NG48 757 aa18.31■□□□□ 0.52
PRDM16-210ENST00000607632 RTFDC1Q9BY42 306 aaPredicted RBP18.31■□□□□ 0.52
PRDM16-210ENST00000607632 NMRK2Q9NPI5 230 aa18.31■□□□□ 0.52
PRDM16-210ENST00000607632 COL4A5P29400 1685 aa18.31■□□□□ 0.52
PRDM16-210ENST00000607632 DUOX1Q9NRD9 1551 aa18.3■□□□□ 0.52
PRDM16-210ENST00000607632 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
PRDM16-210ENST00000607632 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
PRDM16-210ENST00000607632 ZNF277Q9NRM2 450 aaPredicted RBP18.3■□□□□ 0.52
PRDM16-210ENST00000607632 CEP350Q5VT06 3117 aa18.29■□□□□ 0.52
PRDM16-210ENST00000607632 CASP7P55210 303 aa18.29■□□□□ 0.52
PRDM16-210ENST00000607632 GCKRQ14397 625 aa18.29■□□□□ 0.52
PRDM16-210ENST00000607632 VPS33BQ9H267 617 aa18.29■□□□□ 0.52
PRDM16-210ENST00000607632 RTL9Q8NET4 1388 aa18.29■□□□□ 0.52
PRDM16-210ENST00000607632 FZD9O00144 591 aa18.28■□□□□ 0.52
PRDM16-210ENST00000607632 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
PRDM16-210ENST00000607632 BEND3Q5T5X7 828 aa18.28■□□□□ 0.52
PRDM16-210ENST00000607632 MRPL50Q8N5N7 158 aaKnown RBP18.28■□□□□ 0.52
PRDM16-210ENST00000607632 CELF1Q92879 486 aaKnown RBP18.28■□□□□ 0.52
PRDM16-210ENST00000607632 PLA2G12BQ9BX93 195 aa18.28■□□□□ 0.52
PRDM16-210ENST00000607632 POTECB2RU33 542 aa18.26■□□□□ 0.51
PRDM16-210ENST00000607632 F6X3S4 739 aa18.26■□□□□ 0.51
PRDM16-210ENST00000607632 CTSWP56202 376 aa18.26■□□□□ 0.51
PRDM16-210ENST00000607632 ALDH1L2Q3SY69 923 aa18.26■□□□□ 0.51
PRDM16-210ENST00000607632 CCDC152Q4G0S7 254 aa18.26■□□□□ 0.51
PRDM16-210ENST00000607632 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
PRDM16-210ENST00000607632 JARID2Q92833 1246 aaPredicted RBP18.26■□□□□ 0.51
PRDM16-210ENST00000607632 TOMM70O94826 608 aa18.25■□□□□ 0.51
PRDM16-210ENST00000607632 RPS8P62241 208 aaKnown RBP18.25■□□□□ 0.51
PRDM16-210ENST00000607632 TTLL11Q8NHH1 800 aa18.25■□□□□ 0.51
PRDM16-210ENST00000607632 SSH1Q8WYL5 1049 aa18.25■□□□□ 0.51
PRDM16-210ENST00000607632 L3MBTL3Q96JM7 780 aaPredicted RBP18.25■□□□□ 0.51
PRDM16-210ENST00000607632 SCN4AP35499 1836 aa18.25■□□□□ 0.51
PRDM16-210ENST00000607632 PTPRCP08575 1304 aa18.24■□□□□ 0.51
PRDM16-210ENST00000607632 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
PRDM16-210ENST00000607632 UBE3BQ7Z3V4 1068 aa18.24■□□□□ 0.51
PRDM16-210ENST00000607632 MPNDQ8N594 471 aa18.24■□□□□ 0.51
PRDM16-210ENST00000607632 SUPT20HQ8NEM7 779 aa18.24■□□□□ 0.51
PRDM16-210ENST00000607632 TMX4Q9H1E5 349 aaPredicted RBP18.24■□□□□ 0.51
PRDM16-210ENST00000607632 RRAGCQ9HB90 399 aa18.24■□□□□ 0.51
PRDM16-210ENST00000607632 SEC31BQ9NQW1 1179 aa18.24■□□□□ 0.51
PRDM16-210ENST00000607632 ALDH1L1O75891 902 aa18.23■□□□□ 0.51
PRDM16-210ENST00000607632 CSF1RP07333 972 aa18.23■□□□□ 0.51
PRDM16-210ENST00000607632 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
PRDM16-210ENST00000607632 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
PRDM16-210ENST00000607632 RBM46Q8TBY0 533 aaKnown RBP18.23■□□□□ 0.51
PRDM16-210ENST00000607632 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
PRDM16-210ENST00000607632 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
PRDM16-210ENST00000607632 KIAA2012Q0VF49 1180 aa18.22■□□□□ 0.51
PRDM16-210ENST00000607632 PODXL2Q9NZ53 605 aa18.22■□□□□ 0.51
PRDM16-210ENST00000607632 LARGE2Q8N3Y3 721 aa18.21■□□□□ 0.51
PRDM16-210ENST00000607632 JDP2Q8WYK2 163 aa18.21■□□□□ 0.51
PRDM16-210ENST00000607632 PPIP5K2O43314 1243 aa18.2■□□□□ 0.5
PRDM16-210ENST00000607632 AOC3Q16853 763 aa18.2■□□□□ 0.5
PRDM16-210ENST00000607632 GREM2Q9H772 168 aa18.2■□□□□ 0.5
PRDM16-210ENST00000607632 UTYO14607 1347 aa18.2■□□□□ 0.5
PRDM16-210ENST00000607632 GRM8O00222 908 aa18.19■□□□□ 0.5
PRDM16-210ENST00000607632 GPSM2P81274 684 aa18.19■□□□□ 0.5
PRDM16-210ENST00000607632 GPC2Q8N158 579 aa18.19■□□□□ 0.5
PRDM16-210ENST00000607632 CDC5LQ99459 802 aaKnown RBP18.19■□□□□ 0.5
PRDM16-210ENST00000607632 SRCIN1Q9C0H9 1055 aa18.19■□□□□ 0.5
PRDM16-210ENST00000607632 ADAMTSL1Q8N6G6 1762 aa18.19■□□□□ 0.5
PRDM16-210ENST00000607632 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
PRDM16-210ENST00000607632 FOXO4P98177 505 aa18.18■□□□□ 0.5
PRDM16-210ENST00000607632 FSTL1Q12841 308 aa18.18■□□□□ 0.5
PRDM16-210ENST00000607632 ANKRD18AQ8IVF6 992 aa18.18■□□□□ 0.5
PRDM16-210ENST00000607632 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
PRDM16-210ENST00000607632 CCDC85AQ96PX6 553 aaPredicted RBP18.18■□□□□ 0.5
PRDM16-210ENST00000607632 POLLQ9UGP5 575 aa18.18■□□□□ 0.5
PRDM16-210ENST00000607632 BSDC1Q9NW68 430 aaPredicted RBP18.17■□□□□ 0.5
PRDM16-210ENST00000607632 ZNRF3Q9ULT6 936 aa18.17■□□□□ 0.5
PRDM16-210ENST00000607632 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
PRDM16-210ENST00000607632 IQCA1LA6NCM1 817 aa18.16■□□□□ 0.5
PRDM16-210ENST00000607632 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
PRDM16-210ENST00000607632 EIF6P56537 245 aaKnown RBP18.16■□□□□ 0.5
PRDM16-210ENST00000607632 HNRNPUQ00839 825 aaKnown RBP eCLIP18.16■□□□□ 0.5
PRDM16-210ENST00000607632 C16orf71Q8IYS4 520 aaPredicted RBP18.16■□□□□ 0.5
PRDM16-210ENST00000607632 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
PRDM16-210ENST00000607632 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
PRDM16-210ENST00000607632 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
PRDM16-210ENST00000607632 A0A1B0GUL6 1792 aa18.15■□□□□ 0.5
PRDM16-210ENST00000607632 HSPA6P17066 643 aa18.15■□□□□ 0.5
PRDM16-210ENST00000607632 ITGA6P23229 1130 aa18.15■□□□□ 0.5
PRDM16-210ENST00000607632 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
PRDM16-210ENST00000607632 SLC4A10Q6U841 1118 aa18.15■□□□□ 0.5
PRDM16-210ENST00000607632 TAF1DQ9H5J8 278 aaPredicted RBP18.15■□□□□ 0.5
PRDM16-210ENST00000607632 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
PRDM16-210ENST00000607632 CXCL9Q07325 125 aa18.14■□□□□ 0.49
PRDM16-210ENST00000607632 WASHC4Q2M389 1173 aa18.14■□□□□ 0.49
PRDM16-210ENST00000607632 EPHA10Q5JZY3 1008 aa18.14■□□□□ 0.49
PRDM16-210ENST00000607632 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
PRDM16-210ENST00000607632 KAZALD1Q96I82 304 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms