RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 PRIMPOLQ96LW4 560 aa10.57□□□□□ -0.72
LINC00458-206ENST00000607494 NOVA2Q9UNW9 492 aaKnown RBP10.57□□□□□ -0.72
LINC00458-206ENST00000607494 MYO19Q96H55 970 aa10.56□□□□□ -0.72
LINC00458-206ENST00000607494 NACC1Q96RE7 527 aa10.56□□□□□ -0.72
LINC00458-206ENST00000607494 LPIN3Q9BQK8 851 aa10.56□□□□□ -0.72
LINC00458-206ENST00000607494 EFCC1Q9HA90 598 aa10.56□□□□□ -0.72
LINC00458-206ENST00000607494 ZMIZ1Q9ULJ6 1067 aa10.56□□□□□ -0.72
LINC00458-206ENST00000607494 RGS9O75916 674 aaPredicted RBP10.55□□□□□ -0.72
LINC00458-206ENST00000607494 MBTPS1Q14703 1052 aa10.55□□□□□ -0.72
LINC00458-206ENST00000607494 C11orf91Q3C1V1 193 aa10.55□□□□□ -0.72
LINC00458-206ENST00000607494 DHX32Q7L7V1 743 aaKnown RBP10.55□□□□□ -0.72
LINC00458-206ENST00000607494 OPLAHO14841 1288 aa10.54□□□□□ -0.72
LINC00458-206ENST00000607494 PRMT3O60678 531 aa10.54□□□□□ -0.72
LINC00458-206ENST00000607494 RARAP10276 462 aa10.54□□□□□ -0.72
LINC00458-206ENST00000607494 ELNP15502 786 aa10.54□□□□□ -0.72
LINC00458-206ENST00000607494 GRIK5Q16478 980 aa10.54□□□□□ -0.72
LINC00458-206ENST00000607494 FOXD4L6Q3SYB3 417 aaPredicted RBP10.54□□□□□ -0.72
LINC00458-206ENST00000607494 PERM1Q5SV97 790 aa10.54□□□□□ -0.72
LINC00458-206ENST00000607494 FOXD4L3Q6VB84 417 aaPredicted RBP10.54□□□□□ -0.72
LINC00458-206ENST00000607494 HFE2Q6ZVN8 426 aa10.54□□□□□ -0.72
LINC00458-206ENST00000607494 HOMEZQ8IX15 550 aa10.54□□□□□ -0.72
LINC00458-206ENST00000607494 DYRK3O43781 588 aa10.53□□□□□ -0.72
LINC00458-206ENST00000607494 ADGRE1Q14246 886 aa10.53□□□□□ -0.72
LINC00458-206ENST00000607494 COX20Q5RI15 118 aa10.53□□□□□ -0.72
LINC00458-206ENST00000607494 RGL4Q8IZJ4 473 aa10.53□□□□□ -0.72
LINC00458-206ENST00000607494 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
LINC00458-206ENST00000607494 MAP3K6O95382 1288 aa10.52□□□□□ -0.73
LINC00458-206ENST00000607494 RAC1P63000 192 aa10.52□□□□□ -0.73
LINC00458-206ENST00000607494 ZMYM1Q5SVZ6 1142 aa10.52□□□□□ -0.73
LINC00458-206ENST00000607494 ILDR2Q71H61 639 aa10.52□□□□□ -0.73
LINC00458-206ENST00000607494 TREML1Q86YW5 311 aa10.52□□□□□ -0.73
LINC00458-206ENST00000607494 FMR1NBQ8N0W7 255 aaPredicted RBP10.52□□□□□ -0.73
LINC00458-206ENST00000607494 STK32AQ8WU08 396 aa10.52□□□□□ -0.73
LINC00458-206ENST00000607494 FAM26DQ5JW98 314 aa10.51□□□□□ -0.73
LINC00458-206ENST00000607494 TRPM4Q8TD43 1214 aa10.51□□□□□ -0.73
LINC00458-206ENST00000607494 SAP130Q9H0E3 1048 aa10.51□□□□□ -0.73
LINC00458-206ENST00000607494 C9orf172C9J069 976 aa10.5□□□□□ -0.73
LINC00458-206ENST00000607494 GPLD1P80108 840 aa10.5□□□□□ -0.73
LINC00458-206ENST00000607494 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
LINC00458-206ENST00000607494 CAPN12Q6ZSI9 719 aa10.5□□□□□ -0.73
LINC00458-206ENST00000607494 CMTR1Q8N1G2 835 aaKnown RBP10.5□□□□□ -0.73
LINC00458-206ENST00000607494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.49□□□□□ -0.73
LINC00458-206ENST00000607494 XYLBO75191 536 aa10.49□□□□□ -0.73
LINC00458-206ENST00000607494 FAM69CQ0P6D2 419 aa10.49□□□□□ -0.73
LINC00458-206ENST00000607494 OCLNQ16625 522 aa10.49□□□□□ -0.73
LINC00458-206ENST00000607494 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
LINC00458-206ENST00000607494 MKNK1Q9BUB5 465 aa10.49□□□□□ -0.73
LINC00458-206ENST00000607494 TXNRD3Q86VQ6 643 aa10.48□□□□□ -0.73
LINC00458-206ENST00000607494 ETFBKMTQ8IXQ9 262 aa10.48□□□□□ -0.73
LINC00458-206ENST00000607494 LENG1Q96BZ8 264 aaPredicted RBP10.48□□□□□ -0.73
LINC00458-206ENST00000607494 SMG9Q9H0W8 520 aaKnown RBP10.48□□□□□ -0.73
LINC00458-206ENST00000607494 USP21Q9UK80 565 aa10.48□□□□□ -0.73
LINC00458-206ENST00000607494 KCNMB2Q9Y691 235 aa10.48□□□□□ -0.73
LINC00458-206ENST00000607494 ACIN1Q9UKV3 1341 aaKnown RBP10.48□□□□□ -0.73
LINC00458-206ENST00000607494 EIF2AK2P19525 551 aaKnown RBP10.47□□□□□ -0.73
LINC00458-206ENST00000607494 FRRS1LQ9P0K9 344 aa10.47□□□□□ -0.73
LINC00458-206ENST00000607494 J3QW42 95 aa10.46□□□□□ -0.73
LINC00458-206ENST00000607494 TRIP4Q15650 581 aaPredicted RBP10.46□□□□□ -0.73
LINC00458-206ENST00000607494 SWI5Q1ZZU3 235 aa10.46□□□□□ -0.73
LINC00458-206ENST00000607494 PRSS36Q5K4E3 855 aa10.46□□□□□ -0.73
LINC00458-206ENST00000607494 NSUN5Q96P11 429 aaKnown RBP10.46□□□□□ -0.73
LINC00458-206ENST00000607494 MMP20O60882 483 aa10.45□□□□□ -0.74
LINC00458-206ENST00000607494 NRG1Q02297 640 aaPredicted RBP10.45□□□□□ -0.74
LINC00458-206ENST00000607494 PCSK7Q16549 785 aa10.45□□□□□ -0.74
LINC00458-206ENST00000607494 WFDC8Q8IUA0 241 aa10.45□□□□□ -0.74
LINC00458-206ENST00000607494 TLR7Q9NYK1 1049 aaKnown RBP10.45□□□□□ -0.74
LINC00458-206ENST00000607494 NRLP54845 237 aa10.44□□□□□ -0.74
LINC00458-206ENST00000607494 TP53INP1Q96A56 240 aa10.44□□□□□ -0.74
LINC00458-206ENST00000607494 DEAF1O75398 565 aaPredicted RBP10.43□□□□□ -0.74
LINC00458-206ENST00000607494 EGFRP00533 1210 aa10.43□□□□□ -0.74
LINC00458-206ENST00000607494 SRPK2P78362 688 aaKnown RBP10.43□□□□□ -0.74
LINC00458-206ENST00000607494 SCO2A0A1W2PP80 73 aa10.42□□□□□ -0.74
LINC00458-206ENST00000607494 TNFRSF10BO14763 440 aa10.42□□□□□ -0.74
LINC00458-206ENST00000607494 NAA30Q147X3 362 aaPredicted RBP10.42□□□□□ -0.74
LINC00458-206ENST00000607494 TMEM164Q5U3C3 297 aa10.42□□□□□ -0.74
LINC00458-206ENST00000607494 C16orf46Q6P387 395 aa10.42□□□□□ -0.74
LINC00458-206ENST00000607494 FBXO11Q86XK2 927 aa10.42□□□□□ -0.74
LINC00458-206ENST00000607494 PLD4Q96BZ4 506 aa10.42□□□□□ -0.74
LINC00458-206ENST00000607494 SSBP4Q9BWG4 385 aaPredicted RBP10.42□□□□□ -0.74
LINC00458-206ENST00000607494 C11orf16Q9NQ32 467 aa10.42□□□□□ -0.74
LINC00458-206ENST00000607494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC00458-206ENST00000607494 ELOAQ14241 798 aaKnown RBP10.41□□□□□ -0.74
LINC00458-206ENST00000607494 GDF6Q6KF10 455 aaPredicted RBP10.41□□□□□ -0.74
LINC00458-206ENST00000607494 CXXC1Q9P0U4 656 aaPredicted RBP10.41□□□□□ -0.74
LINC00458-206ENST00000607494 NOS3P29474 1203 aa10.4□□□□□ -0.74
LINC00458-206ENST00000607494 IREB2P48200 963 aaKnown RBP10.4□□□□□ -0.74
LINC00458-206ENST00000607494 SLAIN2Q9P270 581 aa10.4□□□□□ -0.74
LINC00458-206ENST00000607494 LOC102724428A0A0B4J2F2 783 aa10.39□□□□□ -0.75
LINC00458-206ENST00000607494 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
LINC00458-206ENST00000607494 PSAPP07602 524 aa10.39□□□□□ -0.75
LINC00458-206ENST00000607494 SIK1P57059 783 aa10.39□□□□□ -0.75
LINC00458-206ENST00000607494 DTWD1Q8N5C7 304 aa10.39□□□□□ -0.75
LINC00458-206ENST00000607494 WFDC12Q8WWY7 111 aa10.39□□□□□ -0.75
LINC00458-206ENST00000607494 TTC9Q92623 222 aa10.39□□□□□ -0.75
LINC00458-206ENST00000607494 MEGF10Q96KG7 1140 aa10.38□□□□□ -0.75
LINC00458-206ENST00000607494 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
LINC00458-206ENST00000607494 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
LINC00458-206ENST00000607494 H2AFB2P0C5Z0 115 aa10.37□□□□□ -0.75
LINC00458-206ENST00000607494 BRD2P25440 801 aaKnown RBP10.37□□□□□ -0.75
LINC00458-206ENST00000607494 ARID4AP29374 1257 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms