RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 GRAPLQ8TC17 118 aaPredicted RBP28.4■■■□□ 2.14
TMEM248-207ENST00000607045 HYPKQ9NX55 129 aa28.4■■■□□ 2.14
TMEM248-207ENST00000607045 ZNRF3Q9ULT6 936 aa28.4■■■□□ 2.14
TMEM248-207ENST00000607045 RTL5Q5HYW3 569 aaPredicted RBP28.39■■■□□ 2.14
TMEM248-207ENST00000607045 SUPT20HQ8NEM7 779 aa28.39■■■□□ 2.14
TMEM248-207ENST00000607045 TNS4Q8IZW8 715 aa28.38■■■□□ 2.13
TMEM248-207ENST00000607045 ADAMTSL1Q8N6G6 1762 aa28.37■■■□□ 2.13
TMEM248-207ENST00000607045 LTBP1Q14766 1721 aa28.36■■■□□ 2.13
TMEM248-207ENST00000607045 PHAXQ9H814 394 aaKnown RBP28.36■■■□□ 2.13
TMEM248-207ENST00000607045 KIAA2012Q0VF49 1180 aa28.35■■■□□ 2.13
TMEM248-207ENST00000607045 SF3B3Q15393 1217 aaKnown RBP28.35■■■□□ 2.13
TMEM248-207ENST00000607045 USP50Q70EL3 339 aaPredicted RBP28.35■■■□□ 2.13
TMEM248-207ENST00000607045 CELF1Q92879 486 aaKnown RBP28.35■■■□□ 2.13
TMEM248-207ENST00000607045 IFT57Q9NWB7 429 aa28.35■■■□□ 2.13
TMEM248-207ENST00000607045 GPRC5DQ9NZD1 345 aa28.35■■■□□ 2.13
TMEM248-207ENST00000607045 RAD17O75943 681 aa28.34■■■□□ 2.13
TMEM248-207ENST00000607045 TRIM28Q13263 835 aaKnown RBP28.34■■■□□ 2.13
TMEM248-207ENST00000607045 DEFB115Q30KQ5 88 aa28.34■■■□□ 2.13
TMEM248-207ENST00000607045 C8orf58Q8NAV2 365 aa28.34■■■□□ 2.13
TMEM248-207ENST00000607045 CAPN15O75808 1086 aa28.33■■■□□ 2.13
TMEM248-207ENST00000607045 GMPSP49915 693 aaPredicted RBP28.33■■■□□ 2.13
TMEM248-207ENST00000607045 GNAI1P63096 354 aa28.33■■■□□ 2.13
TMEM248-207ENST00000607045 RIC3Q7Z5B4 369 aa28.33■■■□□ 2.13
TMEM248-207ENST00000607045 TRAF5O00463 557 aa28.32■■■□□ 2.12
TMEM248-207ENST00000607045 FOXN1O15353 648 aa28.32■■■□□ 2.12
TMEM248-207ENST00000607045 ANKRD36CQ5JPF3 1778 aa28.32■■■□□ 2.12
TMEM248-207ENST00000607045 TAF1P21675 1872 aa28.32■■■□□ 2.12
TMEM248-207ENST00000607045 RASSF10A6NK89 507 aa28.31■■■□□ 2.12
TMEM248-207ENST00000607045 YDJCA8MPS7 323 aa28.31■■■□□ 2.12
TMEM248-207ENST00000607045 IRS4O14654 1257 aaPredicted RBP28.31■■■□□ 2.12
TMEM248-207ENST00000607045 CCDC184Q52MB2 194 aa28.31■■■□□ 2.12
TMEM248-207ENST00000607045 CIAPIN1Q6FI81 312 aa28.31■■■□□ 2.12
TMEM248-207ENST00000607045 ADARB2Q9NS39 739 aaKnown RBP28.31■■■□□ 2.12
TMEM248-207ENST00000607045 LAMB2P55268 1798 aa28.31■■■□□ 2.12
TMEM248-207ENST00000607045 TMC4Q7Z404 712 aa28.3■■■□□ 2.12
TMEM248-207ENST00000607045 ABT1Q9ULW3 272 aaKnown RBP28.3■■■□□ 2.12
TMEM248-207ENST00000607045 NSFL1CQ9UNZ2 370 aaKnown RBP28.3■■■□□ 2.12
TMEM248-207ENST00000607045 CST9Q5W186 159 aa28.29■■■□□ 2.12
TMEM248-207ENST00000607045 JARID2Q92833 1246 aaPredicted RBP28.28■■■□□ 2.12
TMEM248-207ENST00000607045 MYD88Q99836 296 aa28.28■■■□□ 2.12
TMEM248-207ENST00000607045 POLLQ9UGP5 575 aa28.28■■■□□ 2.12
TMEM248-207ENST00000607045 SHTN1A0MZ66 631 aa28.27■■■□□ 2.12
TMEM248-207ENST00000607045 RIMBP2O15034 1052 aa28.27■■■□□ 2.12
TMEM248-207ENST00000607045 HIRAP54198 1017 aaPredicted RBP28.27■■■□□ 2.12
TMEM248-207ENST00000607045 GPSM2P81274 684 aa28.27■■■□□ 2.12
TMEM248-207ENST00000607045 CALD1Q05682 793 aaKnown RBP28.27■■■□□ 2.12
TMEM248-207ENST00000607045 GOLGA2Q08379 1002 aa28.27■■■□□ 2.12
TMEM248-207ENST00000607045 TNIP1Q15025 636 aa28.27■■■□□ 2.12
TMEM248-207ENST00000607045 BCL2L13Q9BXK5 485 aa28.27■■■□□ 2.12
TMEM248-207ENST00000607045 WDR33Q9C0J8 1336 aaKnown RBP28.26■■■□□ 2.11
TMEM248-207ENST00000607045 RPS8P62241 208 aaKnown RBP28.26■■■□□ 2.11
TMEM248-207ENST00000607045 WASHC4Q2M389 1173 aa28.26■■■□□ 2.11
TMEM248-207ENST00000607045 TSPYL6Q8N831 410 aa28.26■■■□□ 2.11
TMEM248-207ENST00000607045 WBP1LQ9NX94 342 aa28.26■■■□□ 2.11
TMEM248-207ENST00000607045 C6orf229H3BNL8 230 aa28.25■■■□□ 2.11
TMEM248-207ENST00000607045 ZBTB38Q8NAP3 1195 aaPredicted RBP28.25■■■□□ 2.11
TMEM248-207ENST00000607045 SEC31BQ9NQW1 1179 aa28.25■■■□□ 2.11
TMEM248-207ENST00000607045 CNOT7Q9UIV1 285 aaKnown RBP28.25■■■□□ 2.11
TMEM248-207ENST00000607045 GPR101Q96P66 508 aaPredicted RBP28.24■■■□□ 2.11
TMEM248-207ENST00000607045 DBNDD1Q9H9R9 158 aa28.24■■■□□ 2.11
TMEM248-207ENST00000607045 KCNQ5Q9NR82 932 aa28.24■■■□□ 2.11
TMEM248-207ENST00000607045 PGAP2Q9UHJ9 254 aa28.24■■■□□ 2.11
TMEM248-207ENST00000607045 ZBTB12Q9Y330 459 aaPredicted RBP28.24■■■□□ 2.11
TMEM248-207ENST00000607045 GLIS2Q9BZE0 524 aaPredicted RBP28.23■■■□□ 2.11
TMEM248-207ENST00000607045 COL4A1P02462 1669 aa28.23■■■□□ 2.11
TMEM248-207ENST00000607045 DDX60Q8IY21 1712 aaKnown RBP28.22■■■□□ 2.11
TMEM248-207ENST00000607045 TRPM4Q8TD43 1214 aa28.22■■■□□ 2.11
TMEM248-207ENST00000607045 DOK7Q18PE1 504 aa28.21■■■□□ 2.11
TMEM248-207ENST00000607045 CCDC191Q8NCU4 936 aa28.21■■■□□ 2.11
TMEM248-207ENST00000607045 TSR2Q969E8 191 aaKnown RBP28.21■■■□□ 2.11
TMEM248-207ENST00000607045 AIDAQ96BJ3 306 aa28.21■■■□□ 2.11
TMEM248-207ENST00000607045 DUOX1Q9NRD9 1551 aa28.2■■■□□ 2.11
TMEM248-207ENST00000607045 PSMD14O00487 310 aa28.2■■■□□ 2.1
TMEM248-207ENST00000607045 CTCFP49711 727 aaPredicted RBP28.2■■■□□ 2.1
TMEM248-207ENST00000607045 CCDC30Q5VVM6 783 aa28.2■■■□□ 2.1
TMEM248-207ENST00000607045 CYP4F22Q6NT55 531 aa28.2■■■□□ 2.1
TMEM248-207ENST00000607045 TBC1D16Q8TBP0 767 aa28.2■■■□□ 2.1
TMEM248-207ENST00000607045 CCDC85AQ96PX6 553 aaPredicted RBP28.2■■■□□ 2.1
TMEM248-207ENST00000607045 METTL22Q9BUU2 404 aaPredicted RBP28.2■■■□□ 2.1
TMEM248-207ENST00000607045 PCCAP05165 728 aaPredicted RBP28.19■■■□□ 2.1
TMEM248-207ENST00000607045 CAPNS2Q96L46 248 aa28.19■■■□□ 2.1
TMEM248-207ENST00000607045 H7C1D1 291 aa28.18■■■□□ 2.1
TMEM248-207ENST00000607045 LBX1P52954 281 aa28.18■■■□□ 2.1
TMEM248-207ENST00000607045 GRM1Q13255 1194 aa28.18■■■□□ 2.1
TMEM248-207ENST00000607045 PAXIP1Q6ZW49 1069 aaPredicted RBP28.18■■■□□ 2.1
TMEM248-207ENST00000607045 MICALL2Q8IY33 904 aa28.18■■■□□ 2.1
TMEM248-207ENST00000607045 PRDM10Q9NQV6 1147 aa28.18■■■□□ 2.1
TMEM248-207ENST00000607045 CWC25Q9NXE8 425 aaPredicted RBP28.18■■■□□ 2.1
TMEM248-207ENST00000607045 MAP3K2Q9Y2U5 619 aa28.18■■■□□ 2.1
TMEM248-207ENST00000607045 TLL2Q9Y6L7 1015 aa28.18■■■□□ 2.1
TMEM248-207ENST00000607045 CELF2O95319 508 aaKnown RBP28.17■■■□□ 2.1
TMEM248-207ENST00000607045 DLK2Q6UY11 383 aa28.17■■■□□ 2.1
TMEM248-207ENST00000607045 SAMD7Q7Z3H4 446 aa28.17■■■□□ 2.1
TMEM248-207ENST00000607045 ZC3H15Q8WU90 426 aaKnown RBP28.17■■■□□ 2.1
TMEM248-207ENST00000607045 CDHR2Q9BYE9 1310 aa28.17■■■□□ 2.1
TMEM248-207ENST00000607045 ECE2O60344 883 aa28.16■■■□□ 2.1
TMEM248-207ENST00000607045 PDE8AO60658 829 aa28.16■■■□□ 2.1
TMEM248-207ENST00000607045 DPF2Q92785 391 aa28.16■■■□□ 2.1
TMEM248-207ENST00000607045 PI4KAP2A4QPH2 592 aa28.15■■■□□ 2.1
TMEM248-207ENST00000607045 DDX58O95786 925 aaKnown RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms