RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 HOXB7P09629 217 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 EYA1Q99502 592 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 CRNKL1Q9BZJ0 848 aaKnown RBP12.75□□□□□ -0.37
SHANK2-219ENST00000606715 CENPHQ9H3R5 247 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 COL17A1Q9UMD9 1497 aaPredicted RBP12.75□□□□□ -0.37
SHANK2-219ENST00000606715 CASTP20810 708 aaKnown RBP12.75□□□□□ -0.37
SHANK2-219ENST00000606715 ZNF408Q9H9D4 720 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 UGGT1Q9NYU2 1555 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 GRM8O00222 908 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
SHANK2-219ENST00000606715 TAF12Q16514 161 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 SYCP3Q8IZU3 236 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 HMG20BQ9P0W2 317 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 SSX2IPQ9Y2D8 614 aa12.75□□□□□ -0.37
SHANK2-219ENST00000606715 NCBP1Q09161 790 aaKnown RBP12.74□□□□□ -0.37
SHANK2-219ENST00000606715 ZNF772Q68DY9 489 aaPredicted RBP12.74□□□□□ -0.37
SHANK2-219ENST00000606715 IQCEQ6IPM2 695 aa12.74□□□□□ -0.37
SHANK2-219ENST00000606715 CTNNA2P26232 953 aa12.74□□□□□ -0.37
SHANK2-219ENST00000606715 MRE11P49959 708 aa12.74□□□□□ -0.37
SHANK2-219ENST00000606715 SSRP1Q08945 709 aaKnown RBP12.74□□□□□ -0.37
SHANK2-219ENST00000606715 TSPYL1Q9H0U9 437 aa12.74□□□□□ -0.37
SHANK2-219ENST00000606715 CACNA2D4Q7Z3S7 1137 aa12.74□□□□□ -0.37
SHANK2-219ENST00000606715 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
SHANK2-219ENST00000606715 ZNF354CQ86Y25 554 aa12.74□□□□□ -0.37
SHANK2-219ENST00000606715 ZC3H12CQ9C0D7 883 aaKnown RBP12.74□□□□□ -0.37
SHANK2-219ENST00000606715 NIP7Q9Y221 180 aaKnown RBP eCLIP12.74□□□□□ -0.37
SHANK2-219ENST00000606715 SAMD9LQ8IVG5 1584 aa12.74□□□□□ -0.37
SHANK2-219ENST00000606715 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 PUF60Q9UHX1 559 aaKnown RBP12.73□□□□□ -0.37
SHANK2-219ENST00000606715 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
SHANK2-219ENST00000606715 PICALMQ13492 652 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 CWC15Q9P013 229 aaKnown RBP12.73□□□□□ -0.37
SHANK2-219ENST00000606715 TSPOAP1O95153 1857 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 MACROD2A1Z1Q3 448 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 NASPP49321 788 aaPredicted RBP12.73□□□□□ -0.37
SHANK2-219ENST00000606715 PRPF40BQ6NWY9 871 aaKnown RBP12.73□□□□□ -0.37
SHANK2-219ENST00000606715 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 CTNNBL1Q8WYA6 563 aaPredicted RBP12.73□□□□□ -0.37
SHANK2-219ENST00000606715 CALML4Q96GE6 196 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 EYA3Q99504 573 aa12.73□□□□□ -0.37
SHANK2-219ENST00000606715 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-219ENST00000606715 BMP2KLQ5H9B9 411 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 SPC24Q8NBT2 197 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 TRAPPC3LQ5T215 181 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 SMTNL1A8MU46 457 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 PARP10Q53GL7 1025 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 SMARCA5O60264 1052 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-219ENST00000606715 TRAK2O60296 914 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 TNNI2P48788 182 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 CCDC91Q7Z6B0 441 aa12.72□□□□□ -0.37
SHANK2-219ENST00000606715 ATP2B3Q16720 1220 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 RHPN1Q8TCX5 695 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 UPF3BQ9BZI7 483 aaKnown RBP12.71□□□□□ -0.37
SHANK2-219ENST00000606715 ARAP3Q8WWN8 1544 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 USP8P40818 1118 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 SPA17Q15506 151 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 CCDC174Q6PII3 467 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 HOOK3Q86VS8 718 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 FAM177A1Q8N128 213 aaPredicted RBP12.71□□□□□ -0.37
SHANK2-219ENST00000606715 NOD1Q9Y239 953 aa12.71□□□□□ -0.37
SHANK2-219ENST00000606715 MRPS9P82933 396 aaKnown RBP12.71□□□□□ -0.37
SHANK2-219ENST00000606715 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.38
SHANK2-219ENST00000606715 TSPY3P0CV98 308 aa12.71□□□□□ -0.38
SHANK2-219ENST00000606715 TSPY8P0CW00 308 aa12.71□□□□□ -0.38
SHANK2-219ENST00000606715 PREX2Q70Z35 1606 aa12.71□□□□□ -0.38
SHANK2-219ENST00000606715 ATP8B2P98198 1209 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 MRPL50Q8N5N7 158 aaKnown RBP12.7□□□□□ -0.38
SHANK2-219ENST00000606715 PLXNC1O60486 1568 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 GOLIM4O00461 696 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 ORAI2Q96SN7 254 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 DDX21Q9NR30 783 aaKnown RBP eCLIP12.7□□□□□ -0.38
SHANK2-219ENST00000606715 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-219ENST00000606715 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 PLCG2P16885 1265 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 C8orf76Q96K31 380 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 KDM5CP41229 1560 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 FBLN1P23142 703 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 TCERG1LQ5VWI1 586 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-219ENST00000606715 TMEM94Q12767 1356 aa12.7□□□□□ -0.38
SHANK2-219ENST00000606715 AMPD3Q01432 767 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 MFSD6Q6ZSS7 791 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 TMTC2Q8N394 836 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 FLAD1Q8NFF5 587 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 LRRC45Q96CN5 670 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 GOLGA6L7A0A1B0GV03 622 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 GPR162Q16538 588 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 CARD14Q9BXL6 1004 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
SHANK2-219ENST00000606715 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms