RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 NLRP3Q96P20 1036 aa23.03■■□□□ 1.28
SSBP4-212ENST00000601919 RIC1Q4ADV7 1423 aa23.02■■□□□ 1.28
SSBP4-212ENST00000601919 ERC1Q8IUD2 1116 aa23.02■■□□□ 1.28
SSBP4-212ENST00000601919 COPRSQ9NQ92 184 aa23.02■■□□□ 1.28
SSBP4-212ENST00000601919 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
SSBP4-212ENST00000601919 ANKRD18BA2A2Z9 1011 aa23.01■■□□□ 1.27
SSBP4-212ENST00000601919 MMP10P09238 476 aa23.01■■□□□ 1.27
SSBP4-212ENST00000601919 NUCB1Q02818 461 aa23.01■■□□□ 1.27
SSBP4-212ENST00000601919 DDR1Q08345 913 aa23.01■■□□□ 1.27
SSBP4-212ENST00000601919 G3BP1Q13283 466 aaKnown RBP eCLIP23.01■■□□□ 1.27
SSBP4-212ENST00000601919 OS9Q13438 667 aaPredicted RBP23.01■■□□□ 1.27
SSBP4-212ENST00000601919 TAF7LQ5H9L4 462 aa23.01■■□□□ 1.27
SSBP4-212ENST00000601919 EXOC6BQ9Y2D4 811 aa23.01■■□□□ 1.27
SSBP4-212ENST00000601919 NRXN2Q9P2S2 1712 aa23■■□□□ 1.27
SSBP4-212ENST00000601919 RFX5P48382 616 aaPredicted RBP23■■□□□ 1.27
SSBP4-212ENST00000601919 SF3B3Q15393 1217 aaKnown RBP23■■□□□ 1.27
SSBP4-212ENST00000601919 FAM161AQ3B820 660 aa23■■□□□ 1.27
SSBP4-212ENST00000601919 ANKRD45Q5TZF3 282 aa23■■□□□ 1.27
SSBP4-212ENST00000601919 PRR5LQ6MZQ0 368 aa23■■□□□ 1.27
SSBP4-212ENST00000601919 ILDR2Q71H61 639 aa23■■□□□ 1.27
SSBP4-212ENST00000601919 FBXO3Q9UK99 471 aa23■■□□□ 1.27
SSBP4-212ENST00000601919 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
SSBP4-212ENST00000601919 ABCC12Q96J65 1359 aa23■■□□□ 1.27
SSBP4-212ENST00000601919 CASZ1Q86V15 1759 aa22.99■■□□□ 1.27
SSBP4-212ENST00000601919 MSL1Q68DK7 614 aa22.99■■□□□ 1.27
SSBP4-212ENST00000601919 CHD1LQ86WJ1 897 aa22.99■■□□□ 1.27
SSBP4-212ENST00000601919 GREM2Q9H772 168 aa22.99■■□□□ 1.27
SSBP4-212ENST00000601919 ITGA6P23229 1130 aa22.98■■□□□ 1.27
SSBP4-212ENST00000601919 PTPN12Q05209 780 aaKnown RBP22.98■■□□□ 1.27
SSBP4-212ENST00000601919 KIF1BPQ96EK5 621 aa22.98■■□□□ 1.27
SSBP4-212ENST00000601919 LRRCC1Q9C099 1032 aa22.98■■□□□ 1.27
SSBP4-212ENST00000601919 CCDC85AQ96PX6 553 aaPredicted RBP22.97■■□□□ 1.27
SSBP4-212ENST00000601919 PA2G4Q9UQ80 394 aaKnown RBP22.97■■□□□ 1.27
SSBP4-212ENST00000601919 APBB1O00213 710 aa22.96■■□□□ 1.27
SSBP4-212ENST00000601919 CIAO1O76071 339 aa22.96■■□□□ 1.27
SSBP4-212ENST00000601919 CDC5LQ99459 802 aaKnown RBP22.96■■□□□ 1.27
SSBP4-212ENST00000601919 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.26
SSBP4-212ENST00000601919 SIL1Q9H173 461 aa22.95■■□□□ 1.26
SSBP4-212ENST00000601919 IL15P40933 162 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-212ENST00000601919 KLHDC4Q8TBB5 520 aa22.94■■□□□ 1.26
SSBP4-212ENST00000601919 RHPN1Q8TCX5 695 aa22.94■■□□□ 1.26
SSBP4-212ENST00000601919 BRIP1Q9BX63 1249 aa22.94■■□□□ 1.26
SSBP4-212ENST00000601919 LNPKQ9C0E8 428 aa22.94■■□□□ 1.26
SSBP4-212ENST00000601919 EYA2O00167 538 aa22.93■■□□□ 1.26
SSBP4-212ENST00000601919 IGHMBP2P38935 993 aaKnown RBP22.93■■□□□ 1.26
SSBP4-212ENST00000601919 R3HDM1Q15032 1099 aaKnown RBP22.93■■□□□ 1.26
SSBP4-212ENST00000601919 CCDC24Q8N4L8 307 aa22.93■■□□□ 1.26
SSBP4-212ENST00000601919 TNRC6CQ9HCJ0 1690 aaKnown RBP22.93■■□□□ 1.26
SSBP4-212ENST00000601919 PDE6BP35913 854 aa22.92■■□□□ 1.26
SSBP4-212ENST00000601919 DDX46Q7L014 1031 aaKnown RBP22.92■■□□□ 1.26
SSBP4-212ENST00000601919 ZNF594Q96JF6 807 aaPredicted RBP22.92■■□□□ 1.26
SSBP4-212ENST00000601919 MPHOSPH8Q99549 860 aa22.92■■□□□ 1.26
SSBP4-212ENST00000601919 PDGFDQ9GZP0 370 aaPredicted RBP22.92■■□□□ 1.26
SSBP4-212ENST00000601919 MTFR1LQ9H019 292 aa22.92■■□□□ 1.26
SSBP4-212ENST00000601919 LDHAL6AQ6ZMR3 332 aa22.91■■□□□ 1.26
SSBP4-212ENST00000601919 C3orf67Q6ZVT6 689 aa22.91■■□□□ 1.26
SSBP4-212ENST00000601919 ANKRD18AQ8IVF6 992 aa22.91■■□□□ 1.26
SSBP4-212ENST00000601919 CLASRPQ8N2M8 674 aaKnown RBP22.91■■□□□ 1.26
SSBP4-212ENST00000601919 RPGRQ92834 1020 aaKnown RBP22.91■■□□□ 1.26
SSBP4-212ENST00000601919 CNNM1Q9NRU3 951 aa22.91■■□□□ 1.26
SSBP4-212ENST00000601919 KLRG2A4D1S0 409 aaPredicted RBP22.89■■□□□ 1.25
SSBP4-212ENST00000601919 SMARCA5O60264 1052 aaPredicted RBP22.89■■□□□ 1.25
SSBP4-212ENST00000601919 POLD1P28340 1107 aa22.89■■□□□ 1.25
SSBP4-212ENST00000601919 CRY2Q49AN0 593 aa22.89■■□□□ 1.25
SSBP4-212ENST00000601919 RBM17Q96I25 401 aaKnown RBP22.89■■□□□ 1.25
SSBP4-212ENST00000601919 SEC31BQ9NQW1 1179 aa22.89■■□□□ 1.25
SSBP4-212ENST00000601919 ANKRD31Q8N7Z5 1873 aa22.89■■□□□ 1.25
SSBP4-212ENST00000601919 LRP5O75197 1615 aa22.89■■□□□ 1.25
SSBP4-212ENST00000601919 SPEF2Q9C093 1822 aa22.88■■□□□ 1.25
SSBP4-212ENST00000601919 SASH1O94885 1247 aa22.88■■□□□ 1.25
SSBP4-212ENST00000601919 RGS3P49796 1198 aa22.88■■□□□ 1.25
SSBP4-212ENST00000601919 ATG9AQ7Z3C6 839 aa22.88■■□□□ 1.25
SSBP4-212ENST00000601919 CEP126Q9P2H0 1117 aa22.88■■□□□ 1.25
SSBP4-212ENST00000601919 MROH5Q6ZUA9 1318 aa22.87■■□□□ 1.25
SSBP4-212ENST00000601919 LRRC24Q50LG9 513 aa22.87■■□□□ 1.25
SSBP4-212ENST00000601919 IL1RAPL2Q9NP60 686 aa22.87■■□□□ 1.25
SSBP4-212ENST00000601919 ZBTB7AO95365 584 aa22.86■■□□□ 1.25
SSBP4-212ENST00000601919 RPS8P62241 208 aaKnown RBP22.86■■□□□ 1.25
SSBP4-212ENST00000601919 PUS3Q9BZE2 481 aaKnown RBP22.86■■□□□ 1.25
SSBP4-212ENST00000601919 AKAP2Q9Y2D5 859 aa22.86■■□□□ 1.25
SSBP4-212ENST00000601919 RIPOR2Q9Y4F9 1068 aa22.86■■□□□ 1.25
SSBP4-212ENST00000601919 IFIT2P09913 472 aaKnown RBP22.85■■□□□ 1.25
SSBP4-212ENST00000601919 HOXA10P31260 410 aaPredicted RBP22.85■■□□□ 1.25
SSBP4-212ENST00000601919 TFCP2Q12800 502 aa22.85■■□□□ 1.25
SSBP4-212ENST00000601919 GRAPQ13588 217 aa22.85■■□□□ 1.25
SSBP4-212ENST00000601919 METTL24Q5JXM2 366 aa22.85■■□□□ 1.25
SSBP4-212ENST00000601919 GRAPLQ8TC17 118 aaPredicted RBP22.85■■□□□ 1.25
SSBP4-212ENST00000601919 BCL11AQ9H165 835 aa22.85■■□□□ 1.25
SSBP4-212ENST00000601919 GPR108Q9NPR9 543 aa22.85■■□□□ 1.25
SSBP4-212ENST00000601919 BSDC1Q9NW68 430 aaPredicted RBP22.85■■□□□ 1.25
SSBP4-212ENST00000601919 TAF1P21675 1872 aa22.84■■□□□ 1.25
SSBP4-212ENST00000601919 NPR1P16066 1061 aa22.84■■□□□ 1.25
SSBP4-212ENST00000601919 PDE4AP27815 886 aa22.84■■□□□ 1.25
SSBP4-212ENST00000601919 GPATCH3Q96I76 525 aa22.84■■□□□ 1.25
SSBP4-212ENST00000601919 CRAMP1Q96RY5 1269 aa22.84■■□□□ 1.25
SSBP4-212ENST00000601919 PSDA5PKW4 1024 aaPredicted RBP22.83■■□□□ 1.25
SSBP4-212ENST00000601919 AACSQ86V21 672 aa22.83■■□□□ 1.25
SSBP4-212ENST00000601919 H0YIN7 160 aa22.82■■□□□ 1.24
SSBP4-212ENST00000601919 BBOX1O75936 387 aa22.82■■□□□ 1.24
SSBP4-212ENST00000601919 TMC4Q7Z404 712 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms