RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	ITGBL1	O95965	494 aa	Predicted RBP	27.88	■■■□□ 2.05
FARP1-231	ENST00000600648	TAF1	P21675	1872 aa		27.88	■■■□□ 2.05
FARP1-231	ENST00000600648	EPS15	P42566	896 aa		27.88	■■■□□ 2.05
FARP1-231	ENST00000600648	SCNN1D	P51172	638 aa		27.88	■■■□□ 2.05
FARP1-231	ENST00000600648	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.88	■■■□□ 2.05
FARP1-231	ENST00000600648	IRS4	O14654	1257 aa	Predicted RBP	27.87	■■■□□ 2.05
FARP1-231	ENST00000600648	ZEB1	P37275	1124 aa	Predicted RBP	27.87	■■■□□ 2.05
FARP1-231	ENST00000600648	TSPYL6	Q8N831	410 aa		27.87	■■■□□ 2.05
FARP1-231	ENST00000600648	TSR2	Q969E8	191 aa	Known RBP	27.87	■■■□□ 2.05
FARP1-231	ENST00000600648	MYD88	Q99836	296 aa		27.87	■■■□□ 2.05
FARP1-231	ENST00000600648	DDX60	Q8IY21	1712 aa	Known RBP	27.87	■■■□□ 2.05
FARP1-231	ENST00000600648	TRIM28	Q13263	835 aa	Known RBP	27.86	■■■□□ 2.05
FARP1-231	ENST00000600648	CNTROB	Q8N137	903 aa		27.86	■■■□□ 2.05
FARP1-231	ENST00000600648	CELF1	Q92879	486 aa	Known RBP	27.86	■■■□□ 2.05
FARP1-231	ENST00000600648	VPS33B	Q9H267	617 aa		27.86	■■■□□ 2.05
FARP1-231	ENST00000600648	ZNRF3	Q9ULT6	936 aa		27.86	■■■□□ 2.05
FARP1-231	ENST00000600648	LTBP1	Q14766	1721 aa		27.85	■■■□□ 2.05
FARP1-231	ENST00000600648	SF3B3	Q15393	1217 aa	Known RBP	27.85	■■■□□ 2.05
FARP1-231	ENST00000600648	ADAMTSL1	Q8N6G6	1762 aa		27.84	■■■□□ 2.05
FARP1-231	ENST00000600648	CXCL9	Q07325	125 aa		27.84	■■■□□ 2.05
FARP1-231	ENST00000600648	CCDC30	Q5VVM6	783 aa		27.84	■■■□□ 2.05
FARP1-231	ENST00000600648	HSPA1A	P0DMV8	641 aa	Known RBP	27.83	■■■□□ 2.05
FARP1-231	ENST00000600648	HSPA1B	P0DMV9	641 aa	Known RBP	27.83	■■■□□ 2.05
FARP1-231	ENST00000600648	KIAA2012	Q0VF49	1180 aa		27.83	■■■□□ 2.05
FARP1-231	ENST00000600648	JARID2	Q92833	1246 aa	Predicted RBP	27.83	■■■□□ 2.05
FARP1-231	ENST00000600648	MRS2	Q9HD23	443 aa		27.83	■■■□□ 2.05
FARP1-231	ENST00000600648	TMEM88B	A6NKF7	163 aa		27.82	■■■□□ 2.04
FARP1-231	ENST00000600648	RAD17	O75943	681 aa		27.82	■■■□□ 2.04
FARP1-231	ENST00000600648	TMC4	Q7Z404	712 aa		27.82	■■■□□ 2.04
FARP1-231	ENST00000600648	WWC1	Q8IX03	1113 aa		27.81	■■■□□ 2.04
FARP1-231	ENST00000600648	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.81	■■■□□ 2.04
FARP1-231	ENST00000600648	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.81	■■■□□ 2.04
FARP1-231	ENST00000600648	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.8	■■■□□ 2.04
FARP1-231	ENST00000600648	COL13A1	Q5TAT6	717 aa	Predicted RBP	27.8	■■■□□ 2.04
FARP1-231	ENST00000600648	COL4A1	P02462	1669 aa		27.8	■■■□□ 2.04
FARP1-231	ENST00000600648	CNTNAP1	P78357	1384 aa		27.79	■■■□□ 2.04
FARP1-231	ENST00000600648	ANP32C	O43423	234 aa		27.79	■■■□□ 2.04
FARP1-231	ENST00000600648	DDX58	O95786	925 aa	Known RBP	27.79	■■■□□ 2.04
FARP1-231	ENST00000600648	GMPS	P49915	693 aa	Predicted RBP	27.79	■■■□□ 2.04
FARP1-231	ENST00000600648	CIAPIN1	Q6FI81	312 aa		27.79	■■■□□ 2.04
FARP1-231	ENST00000600648	GPRC5D	Q9NZD1	345 aa		27.79	■■■□□ 2.04
FARP1-231	ENST00000600648	DUOX1	Q9NRD9	1551 aa		27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	GPSM2	P81274	684 aa		27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	CCDC27	Q2M243	656 aa		27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	CCDC191	Q8NCU4	936 aa		27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	METTL22	Q9BUU2	404 aa	Predicted RBP	27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	CWC25	Q9NXE8	425 aa	Predicted RBP	27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	MAP3K2	Q9Y2U5	619 aa		27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	SALL2	Q9Y467	1007 aa	Predicted RBP	27.78	■■■□□ 2.04
FARP1-231	ENST00000600648	C6orf229	H3BNL8	230 aa		27.77	■■■□□ 2.04
FARP1-231	ENST00000600648	RIMBP2	O15034	1052 aa		27.77	■■■□□ 2.04
FARP1-231	ENST00000600648	FMR1	Q06787	632 aa	Known RBP eCLIP	27.77	■■■□□ 2.04
FARP1-231	ENST00000600648	USP50	Q70EL3	339 aa	Predicted RBP	27.77	■■■□□ 2.04
FARP1-231	ENST00000600648	BCL2L13	Q9BXK5	485 aa		27.77	■■■□□ 2.04
FARP1-231	ENST00000600648	CHMP4A	Q9BY43	222 aa		27.77	■■■□□ 2.04
FARP1-231	ENST00000600648	SEC31B	Q9NQW1	1179 aa		27.77	■■■□□ 2.04
FARP1-231	ENST00000600648	YDJC	A8MPS7	323 aa		27.76	■■■□□ 2.03
FARP1-231	ENST00000600648	RPS8	P62241	208 aa	Known RBP	27.76	■■■□□ 2.03
FARP1-231	ENST00000600648	WASHC4	Q2M389	1173 aa		27.76	■■■□□ 2.03
FARP1-231	ENST00000600648	ADARB2	Q9NS39	739 aa	Known RBP	27.76	■■■□□ 2.03
FARP1-231	ENST00000600648	PCCA	P05165	728 aa	Predicted RBP	27.75	■■■□□ 2.03
FARP1-231	ENST00000600648	TNIP1	Q15025	636 aa		27.75	■■■□□ 2.03
FARP1-231	ENST00000600648	GPR101	Q96P66	508 aa	Predicted RBP	27.75	■■■□□ 2.03
FARP1-231	ENST00000600648	STK31	Q9BXU1	1019 aa		27.75	■■■□□ 2.03
FARP1-231	ENST00000600648	DBNDD1	Q9H9R9	158 aa		27.75	■■■□□ 2.03
FARP1-231	ENST00000600648	POLL	Q9UGP5	575 aa		27.75	■■■□□ 2.03
FARP1-231	ENST00000600648	LRRC37A	A6NMS7	1700 aa		27.75	■■■□□ 2.03
FARP1-231	ENST00000600648	PI4KAP2	A4QPH2	592 aa		27.74	■■■□□ 2.03
FARP1-231	ENST00000600648	HSP90B1	P14625	803 aa	Known RBP	27.74	■■■□□ 2.03
FARP1-231	ENST00000600648	TWISTNB	Q3B726	338 aa	Predicted RBP	27.74	■■■□□ 2.03
FARP1-231	ENST00000600648	PI4KAP1	Q8N8J0	262 aa		27.74	■■■□□ 2.03
FARP1-231	ENST00000600648	ABT1	Q9ULW3	272 aa	Known RBP	27.74	■■■□□ 2.03
FARP1-231	ENST00000600648	TRAF5	O00463	557 aa		27.73	■■■□□ 2.03
FARP1-231	ENST00000600648	VEGFB	P49765	207 aa		27.73	■■■□□ 2.03
FARP1-231	ENST00000600648	KSR2	Q6VAB6	950 aa		27.73	■■■□□ 2.03
FARP1-231	ENST00000600648	PDE8A	O60658	829 aa		27.72	■■■□□ 2.03
FARP1-231	ENST00000600648	CCDC152	Q4G0S7	254 aa		27.72	■■■□□ 2.03
FARP1-231	ENST00000600648	G2E3	Q7L622	706 aa		27.72	■■■□□ 2.03
FARP1-231	ENST00000600648	SHTN1	A0MZ66	631 aa		27.71	■■■□□ 2.03
FARP1-231	ENST00000600648	DOK7	Q18PE1	504 aa		27.71	■■■□□ 2.03
FARP1-231	ENST00000600648	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.71	■■■□□ 2.03
FARP1-231	ENST00000600648	SLC4A2	P04920	1241 aa		27.7	■■■□□ 2.02
FARP1-231	ENST00000600648	IGKV5-2	P06315	115 aa		27.7	■■■□□ 2.02
FARP1-231	ENST00000600648	TBC1D16	Q8TBP0	767 aa		27.7	■■■□□ 2.02
FARP1-231	ENST00000600648	IL16	Q14005	1332 aa		27.69	■■■□□ 2.02
FARP1-231	ENST00000600648	DEFB115	Q30KQ5	88 aa		27.69	■■■□□ 2.02
FARP1-231	ENST00000600648	TRPM4	Q8TD43	1214 aa		27.69	■■■□□ 2.02
FARP1-231	ENST00000600648	EYA3	Q99504	573 aa		27.69	■■■□□ 2.02
FARP1-231	ENST00000600648	ANKIB1	Q9P2G1	1089 aa		27.69	■■■□□ 2.02
FARP1-231	ENST00000600648	CNOT7	Q9UIV1	285 aa	Known RBP	27.69	■■■□□ 2.02
FARP1-231	ENST00000600648	PSMD14	O00487	310 aa		27.68	■■■□□ 2.02
FARP1-231	ENST00000600648	NEXN	Q0ZGT2	675 aa		27.68	■■■□□ 2.02
FARP1-231	ENST00000600648	CWF19L2	Q2TBE0	894 aa	Known RBP	27.68	■■■□□ 2.02
FARP1-231	ENST00000600648	KCNQ5	Q9NR82	932 aa		27.68	■■■□□ 2.02
FARP1-231	ENST00000600648	FANCI	Q9NVI1	1328 aa		27.67	■■■□□ 2.02
FARP1-231	ENST00000600648	RASSF10	A6NK89	507 aa		27.67	■■■□□ 2.02
FARP1-231	ENST00000600648	ECE2	O60344	883 aa		27.67	■■■□□ 2.02
FARP1-231	ENST00000600648	UFL1	O94874	794 aa		27.67	■■■□□ 2.02
FARP1-231	ENST00000600648	CDHR2	Q9BYE9	1310 aa		27.67	■■■□□ 2.02

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