RNA–Protein interactions for RNA: ENST00000599946.2

AC009041.1-202, humanhuman

TSL 5 BASIC

Gene AC009041.1, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-202ENST00000599946 CHD4Q14839 1912 aa16.49■□□□□ 0.23
AC009041.1-202ENST00000599946 COL11A2P13942 1736 aaPredicted RBP16.48■□□□□ 0.23
AC009041.1-202ENST00000599946 CTSWP56202 376 aa16.48■□□□□ 0.23
AC009041.1-202ENST00000599946 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
AC009041.1-202ENST00000599946 UBE3BQ7Z3V4 1068 aa16.48■□□□□ 0.23
AC009041.1-202ENST00000599946 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
AC009041.1-202ENST00000599946 TNRC6CQ9HCJ0 1690 aaKnown RBP16.48■□□□□ 0.23
AC009041.1-202ENST00000599946 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
AC009041.1-202ENST00000599946 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
AC009041.1-202ENST00000599946 ANKRD36CQ5JPF3 1778 aa16.47■□□□□ 0.23
AC009041.1-202ENST00000599946 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
AC009041.1-202ENST00000599946 OLFM4Q6UX06 510 aa16.47■□□□□ 0.23
AC009041.1-202ENST00000599946 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
AC009041.1-202ENST00000599946 ARHGAP45Q92619 1136 aa16.47■□□□□ 0.23
AC009041.1-202ENST00000599946 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.23
AC009041.1-202ENST00000599946 GRM8O00222 908 aa16.46■□□□□ 0.23
AC009041.1-202ENST00000599946 CELF1Q92879 486 aaKnown RBP16.46■□□□□ 0.23
AC009041.1-202ENST00000599946 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
AC009041.1-202ENST00000599946 VPS33BQ9H267 617 aa16.46■□□□□ 0.23
AC009041.1-202ENST00000599946 KIF16BQ96L93 1317 aa16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 CSF1RP07333 972 aa16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 SUPT20HQ8NEM7 779 aa16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 RTFDC1Q9BY42 306 aaPredicted RBP16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 GPBP1L1Q9HC44 474 aaPredicted RBP16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
AC009041.1-202ENST00000599946 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
AC009041.1-202ENST00000599946 MPNDQ8N594 471 aa16.44■□□□□ 0.22
AC009041.1-202ENST00000599946 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
AC009041.1-202ENST00000599946 ZNF277Q9NRM2 450 aaPredicted RBP16.44■□□□□ 0.22
AC009041.1-202ENST00000599946 UTYO14607 1347 aa16.44■□□□□ 0.22
AC009041.1-202ENST00000599946 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
AC009041.1-202ENST00000599946 DPP8Q6V1X1 898 aaPredicted RBP16.43■□□□□ 0.22
AC009041.1-202ENST00000599946 ANKRD18AQ8IVF6 992 aa16.43■□□□□ 0.22
AC009041.1-202ENST00000599946 CACNA1FO60840 1977 aa16.43■□□□□ 0.22
AC009041.1-202ENST00000599946 KDM2BQ8NHM5 1336 aa16.43■□□□□ 0.22
AC009041.1-202ENST00000599946 GLTPD2A6NH11 291 aa16.42■□□□□ 0.22
AC009041.1-202ENST00000599946 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
AC009041.1-202ENST00000599946 DPY19L2Q6NUT2 758 aa16.42■□□□□ 0.22
AC009041.1-202ENST00000599946 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
AC009041.1-202ENST00000599946 GREM2Q9H772 168 aa16.42■□□□□ 0.22
AC009041.1-202ENST00000599946 FOXO4P98177 505 aa16.41■□□□□ 0.22
AC009041.1-202ENST00000599946 BSDC1Q9NW68 430 aaPredicted RBP16.41■□□□□ 0.22
AC009041.1-202ENST00000599946 FZD9O00144 591 aa16.4■□□□□ 0.22
AC009041.1-202ENST00000599946 ITGA6P23229 1130 aa16.4■□□□□ 0.22
AC009041.1-202ENST00000599946 IGHMBP2P38935 993 aaKnown RBP16.4■□□□□ 0.22
AC009041.1-202ENST00000599946 ZNF526Q8TF50 670 aaPredicted RBP16.4■□□□□ 0.22
AC009041.1-202ENST00000599946 JDP2Q8WYK2 163 aa16.4■□□□□ 0.22
AC009041.1-202ENST00000599946 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
AC009041.1-202ENST00000599946 BCAR3O75815 825 aa16.39■□□□□ 0.21
AC009041.1-202ENST00000599946 NBPF7P0C2Y1 421 aaPredicted RBP16.39■□□□□ 0.21
AC009041.1-202ENST00000599946 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
AC009041.1-202ENST00000599946 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
AC009041.1-202ENST00000599946 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
AC009041.1-202ENST00000599946 USP44Q9H0E7 712 aa16.39■□□□□ 0.21
AC009041.1-202ENST00000599946 NSFL1CQ9UNZ2 370 aaKnown RBP16.39■□□□□ 0.21
AC009041.1-202ENST00000599946 ANKRD18BA2A2Z9 1011 aa16.38■□□□□ 0.21
AC009041.1-202ENST00000599946 PPIP5K2O43314 1243 aa16.38■□□□□ 0.21
AC009041.1-202ENST00000599946 KIAA2012Q0VF49 1180 aa16.38■□□□□ 0.21
AC009041.1-202ENST00000599946 IFIT5Q13325 482 aaKnown RBP16.38■□□□□ 0.21
AC009041.1-202ENST00000599946 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
AC009041.1-202ENST00000599946 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
AC009041.1-202ENST00000599946 SUCLG2Q96I99 432 aa16.38■□□□□ 0.21
AC009041.1-202ENST00000599946 HDAC5Q9UQL6 1122 aa16.38■□□□□ 0.21
AC009041.1-202ENST00000599946 GPSM2P81274 684 aa16.37■□□□□ 0.21
AC009041.1-202ENST00000599946 RABL6Q3YEC7 729 aaPredicted RBP16.37■□□□□ 0.21
AC009041.1-202ENST00000599946 EPHA10Q5JZY3 1008 aa16.37■□□□□ 0.21
AC009041.1-202ENST00000599946 INTS3Q68E01 1043 aaKnown RBP16.37■□□□□ 0.21
AC009041.1-202ENST00000599946 NIM1KQ8IY84 436 aa16.37■□□□□ 0.21
AC009041.1-202ENST00000599946 EYA3Q99504 573 aa16.37■□□□□ 0.21
AC009041.1-202ENST00000599946 MPHOSPH8Q99549 860 aa16.37■□□□□ 0.21
AC009041.1-202ENST00000599946 DDX60Q8IY21 1712 aaKnown RBP16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 FER1L6Q2WGJ9 1857 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 KIF3CO14782 793 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 TRIM27P14373 513 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 AOC3Q16853 763 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 ZKSCAN2Q63HK3 967 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 KAZALD1Q96I82 304 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 ANKIB1Q9P2G1 1089 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 GGA1Q9UJY5 639 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 XDHP47989 1333 aa16.36■□□□□ 0.21
AC009041.1-202ENST00000599946 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
AC009041.1-202ENST00000599946 WASHC4Q2M389 1173 aa16.35■□□□□ 0.21
AC009041.1-202ENST00000599946 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
AC009041.1-202ENST00000599946 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
AC009041.1-202ENST00000599946 CHMP3Q9Y3E7 222 aa16.35■□□□□ 0.21
AC009041.1-202ENST00000599946 C6orf229H3BNL8 230 aa16.34■□□□□ 0.21
AC009041.1-202ENST00000599946 VEGFAP15692 232 aaPredicted RBP16.34■□□□□ 0.21
AC009041.1-202ENST00000599946 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
AC009041.1-202ENST00000599946 ANKRD2Q9GZV1 360 aa16.34■□□□□ 0.21
AC009041.1-202ENST00000599946 BICC1Q9H694 974 aaKnown RBP16.34■□□□□ 0.21
AC009041.1-202ENST00000599946 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms