RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 TATP17735 454 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 TYRO3Q06418 890 aa18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 GCKRQ14397 625 aa18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 ARHGEF25Q86VW2 580 aa18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 PROSER2Q86WR7 435 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 DDX17Q92841 729 aaKnown RBP18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 DBNDD2Q9BQY9 259 aa18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 SCAND2PQ9GZW5 306 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 ST3GAL1Q11201 340 aa18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 NEURL1BA8MQ27 555 aa18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 SLFNL1Q499Z3 407 aa18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 CCDC85AQ96PX6 553 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF1-219ENST00000599846 CHST3Q7LGC8 479 aa18.72■□□□□ 0.59
ARHGEF1-219ENST00000599846 PXDNLA1KZ92 1463 aa18.72■□□□□ 0.59
ARHGEF1-219ENST00000599846 PTGS1P23219 599 aa18.72■□□□□ 0.59
ARHGEF1-219ENST00000599846 TERF1P54274 439 aa18.72■□□□□ 0.59
ARHGEF1-219ENST00000599846 RGPD1P0DJD0 1748 aa18.72■□□□□ 0.59
ARHGEF1-219ENST00000599846 GOLIM4O00461 696 aa18.72■□□□□ 0.59
ARHGEF1-219ENST00000599846 GOLGA6L19H0YKK7 550 aa18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 GORABQ5T7V8 394 aa18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 FAM200AQ8TCP9 573 aa18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 ZNF592Q92610 1267 aa18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 MAP7D2Q96T17 732 aa18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 PRDM10Q9NQV6 1147 aa18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 DBNLQ9UJU6 430 aaKnown RBP18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 LMBR1LQ6UX01 489 aa18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 DNAJC25Q9H1X3 360 aa18.71■□□□□ 0.59
ARHGEF1-219ENST00000599846 CCDC186Q7Z3E2 898 aa18.7■□□□□ 0.58
ARHGEF1-219ENST00000599846 PYCARDQ9ULZ3 195 aa18.7■□□□□ 0.58
ARHGEF1-219ENST00000599846 HMGN5P82970 282 aaKnown RBP18.7■□□□□ 0.58
ARHGEF1-219ENST00000599846 PIK3C2AO00443 1686 aa18.7■□□□□ 0.58
ARHGEF1-219ENST00000599846 AP5Z1O43299 807 aa18.7■□□□□ 0.58
ARHGEF1-219ENST00000599846 TIMM10P62072 90 aa18.7■□□□□ 0.58
ARHGEF1-219ENST00000599846 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
ARHGEF1-219ENST00000599846 BECN2A8MW95 431 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 TAF5LO75529 589 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 ZNF165P49910 485 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 TNNI3KQ59H18 835 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 LEO1Q8WVC0 666 aaPredicted RBP18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 FPGT-TNNI3KV9GXZ4 949 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 ANKARQ7Z5J8 1434 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 CABP4P57796 275 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 KRT32Q14532 448 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 KIF3AQ9Y496 699 aa18.69■□□□□ 0.58
ARHGEF1-219ENST00000599846 NR1I2O75469 434 aa18.68■□□□□ 0.58
ARHGEF1-219ENST00000599846 TOB2Q14106 344 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-219ENST00000599846 ZRSR1Q15695 479 aaKnown RBP18.68■□□□□ 0.58
ARHGEF1-219ENST00000599846 METTL22Q9BUU2 404 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-219ENST00000599846 FKBP4Q02790 459 aaKnown RBP eCLIP18.68■□□□□ 0.58
ARHGEF1-219ENST00000599846 IL17RAQ96F46 866 aa18.68■□□□□ 0.58
ARHGEF1-219ENST00000599846 C16orf45Q96MC5 204 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-219ENST00000599846 HMG20BQ9P0W2 317 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 LRMPQ12912 555 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 RAB11FIP4Q86YS3 637 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 SLC52A2Q9HAB3 445 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 CBX8Q9HC52 389 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 SNRKQ9NRH2 765 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 A0A087WWV3 80 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 SNRPA1P09661 255 aaKnown RBP18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 ME1P48163 572 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 NCOA5Q9HCD5 579 aaKnown RBP18.67■□□□□ 0.58
ARHGEF1-219ENST00000599846 WASHC4Q2M389 1173 aa18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 MCMDC2Q4G0Z9 681 aa18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 ERCC4Q92889 916 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 FTOQ9C0B1 505 aaKnown RBP eCLIP18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 ZBTB3Q9H5J0 574 aa18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 SF3A1Q15459 793 aaKnown RBP18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 MYRIPQ8NFW9 859 aa18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 FMN2Q9NZ56 1722 aa18.66■□□□□ 0.58
ARHGEF1-219ENST00000599846 CYP21A2P08686 494 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 PDIA6Q15084 440 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 PKNOX2Q96KN3 472 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 U3KPZ7 1027 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 PXDNQ92626 1479 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 DDX19AQ9NUU7 478 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 XRN1Q8IZH2 1706 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 HAND2P61296 217 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 FILIP1Q7Z7B0 1213 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 CFAP45Q9UL16 551 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 NALCNQ8IZF0 1738 aa18.65■□□□□ 0.58
ARHGEF1-219ENST00000599846 PRIMPOLQ96LW4 560 aa18.64■□□□□ 0.58
ARHGEF1-219ENST00000599846 TOPAZ1Q8N9V7 1692 aa18.64■□□□□ 0.57
ARHGEF1-219ENST00000599846 PTPN12Q05209 780 aaKnown RBP18.64■□□□□ 0.57
ARHGEF1-219ENST00000599846 ZNF594Q96JF6 807 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF1-219ENST00000599846 FMNL2Q96PY5 1086 aa18.64■□□□□ 0.57
ARHGEF1-219ENST00000599846 FAM208AQ9UK61 1670 aaKnown RBP18.64■□□□□ 0.57
ARHGEF1-219ENST00000599846 SDF4Q9BRK5 362 aa18.64■□□□□ 0.57
ARHGEF1-219ENST00000599846 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 ATP5JP18859 108 aa18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 CBX1P83916 185 aa18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 TAF7LQ5H9L4 462 aa18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 MTERF4Q7Z6M4 381 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 GTF3C6Q969F1 213 aa18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 FUCA2Q9BTY2 467 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms