RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 PNMA6EA0A0J9YXQ4 647 aa24.02■■□□□ 1.44
LTBP4-223ENST00000598717 PDE6BP35913 854 aa24.02■■□□□ 1.44
LTBP4-223ENST00000598717 CCDC57Q2TAC2 916 aa24.02■■□□□ 1.44
LTBP4-223ENST00000598717 SIRT2Q8IXJ6 389 aa24.02■■□□□ 1.44
LTBP4-223ENST00000598717 SPON1Q9HCB6 807 aa24.02■■□□□ 1.44
LTBP4-223ENST00000598717 DDX60Q8IY21 1712 aaKnown RBP24.01■■□□□ 1.43
LTBP4-223ENST00000598717 IFIT5Q13325 482 aaKnown RBP24.01■■□□□ 1.43
LTBP4-223ENST00000598717 C3orf67Q6ZVT6 689 aa24.01■■□□□ 1.43
LTBP4-223ENST00000598717 SSH3Q8TE77 659 aa24.01■■□□□ 1.43
LTBP4-223ENST00000598717 LAMB2P55268 1798 aa24.01■■□□□ 1.43
LTBP4-223ENST00000598717 ANKRD18BA2A2Z9 1011 aa24■■□□□ 1.43
LTBP4-223ENST00000598717 HDAC1Q13547 482 aaPredicted RBP24■■□□□ 1.43
LTBP4-223ENST00000598717 POLA2Q14181 598 aa24■■□□□ 1.43
LTBP4-223ENST00000598717 FAM161AQ3B820 660 aa24■■□□□ 1.43
LTBP4-223ENST00000598717 GREM2Q9H772 168 aa24■■□□□ 1.43
LTBP4-223ENST00000598717 ITGA6P23229 1130 aa23.99■■□□□ 1.43
LTBP4-223ENST00000598717 TAF7LQ5H9L4 462 aa23.99■■□□□ 1.43
LTBP4-223ENST00000598717 RPGRQ92834 1020 aaKnown RBP23.99■■□□□ 1.43
LTBP4-223ENST00000598717 PTGER2P43116 358 aa23.98■■□□□ 1.43
LTBP4-223ENST00000598717 DDX46Q7L014 1031 aaKnown RBP23.98■■□□□ 1.43
LTBP4-223ENST00000598717 SGIP1Q9BQI5 828 aa23.98■■□□□ 1.43
LTBP4-223ENST00000598717 KLRG2A4D1S0 409 aaPredicted RBP23.97■■□□□ 1.43
LTBP4-223ENST00000598717 MYH3P11055 1940 aa23.97■■□□□ 1.43
LTBP4-223ENST00000598717 B4GALNT3Q6L9W6 998 aa23.97■■□□□ 1.43
LTBP4-223ENST00000598717 RTL9Q8NET4 1388 aa23.97■■□□□ 1.43
LTBP4-223ENST00000598717 PDZRN3Q9UPQ7 1066 aa23.97■■□□□ 1.43
LTBP4-223ENST00000598717 IGHDP01880 384 aa23.96■■□□□ 1.43
LTBP4-223ENST00000598717 CRY2Q49AN0 593 aa23.96■■□□□ 1.43
LTBP4-223ENST00000598717 RBM17Q96I25 401 aaKnown RBP23.96■■□□□ 1.43
LTBP4-223ENST00000598717 CDC5LQ99459 802 aaKnown RBP23.96■■□□□ 1.43
LTBP4-223ENST00000598717 C10orf71Q711Q0 1435 aa23.95■■□□□ 1.42
LTBP4-223ENST00000598717 H0YIN7 160 aa23.95■■□□□ 1.42
LTBP4-223ENST00000598717 SURF6O75683 361 aaKnown RBP23.95■■□□□ 1.42
LTBP4-223ENST00000598717 RFX5P48382 616 aaPredicted RBP23.95■■□□□ 1.42
LTBP4-223ENST00000598717 C2CD5Q86YS7 1000 aa23.95■■□□□ 1.42
LTBP4-223ENST00000598717 SEC31BQ9NQW1 1179 aa23.95■■□□□ 1.42
LTBP4-223ENST00000598717 TNRC6CQ9HCJ0 1690 aaKnown RBP23.95■■□□□ 1.42
LTBP4-223ENST00000598717 PTPN12Q05209 780 aaKnown RBP23.94■■□□□ 1.42
LTBP4-223ENST00000598717 KLHDC4Q8TBB5 520 aa23.94■■□□□ 1.42
LTBP4-223ENST00000598717 COPRSQ9NQ92 184 aa23.94■■□□□ 1.42
LTBP4-223ENST00000598717 PA2G4Q9UQ80 394 aaKnown RBP23.94■■□□□ 1.42
LTBP4-223ENST00000598717 NPR1P16066 1061 aa23.93■■□□□ 1.42
LTBP4-223ENST00000598717 IGHMBP2P38935 993 aaKnown RBP23.93■■□□□ 1.42
LTBP4-223ENST00000598717 ZNF594Q96JF6 807 aaPredicted RBP23.93■■□□□ 1.42
LTBP4-223ENST00000598717 DCTPP1Q9H773 170 aa23.93■■□□□ 1.42
LTBP4-223ENST00000598717 PPP1R1BQ9UD71 204 aaPredicted RBP23.93■■□□□ 1.42
LTBP4-223ENST00000598717 SRGNP10124 158 aa23.92■■□□□ 1.42
LTBP4-223ENST00000598717 G3BP1Q13283 466 aaKnown RBP eCLIP23.92■■□□□ 1.42
LTBP4-223ENST00000598717 OS9Q13438 667 aaPredicted RBP23.92■■□□□ 1.42
LTBP4-223ENST00000598717 HSP90AB4PQ58FF6 505 aa23.92■■□□□ 1.42
LTBP4-223ENST00000598717 ANKRD18AQ8IVF6 992 aa23.92■■□□□ 1.42
LTBP4-223ENST00000598717 KLHL34Q8N239 644 aa23.92■■□□□ 1.42
LTBP4-223ENST00000598717 GCC1Q96CN9 775 aa23.92■■□□□ 1.42
LTBP4-223ENST00000598717 MASTLQ96GX5 879 aa23.92■■□□□ 1.42
LTBP4-223ENST00000598717 MPHOSPH8Q99549 860 aa23.92■■□□□ 1.42
LTBP4-223ENST00000598717 SIL1Q9H173 461 aa23.92■■□□□ 1.42
LTBP4-223ENST00000598717 HOXA10P31260 410 aaPredicted RBP23.91■■□□□ 1.42
LTBP4-223ENST00000598717 EXOC6BQ9Y2D4 811 aa23.91■■□□□ 1.42
LTBP4-223ENST00000598717 NOP58Q9Y2X3 529 aaKnown RBP23.91■■□□□ 1.42
LTBP4-223ENST00000598717 ANKRD31Q8N7Z5 1873 aa23.91■■□□□ 1.42
LTBP4-223ENST00000598717 ALDH1B1P30837 517 aa23.9■■□□□ 1.42
LTBP4-223ENST00000598717 RPS8P62241 208 aaKnown RBP23.9■■□□□ 1.42
LTBP4-223ENST00000598717 GRAPQ13588 217 aa23.9■■□□□ 1.42
LTBP4-223ENST00000598717 LDHAL6AQ6ZMR3 332 aa23.9■■□□□ 1.42
LTBP4-223ENST00000598717 CENPQQ7L2Z9 268 aaPredicted RBP23.9■■□□□ 1.42
LTBP4-223ENST00000598717 GRAPLQ8TC17 118 aaPredicted RBP23.9■■□□□ 1.42
LTBP4-223ENST00000598717 ZNF622Q969S3 477 aaKnown RBP eCLIP23.9■■□□□ 1.424e-10■□□□□ 8.7
LTBP4-223ENST00000598717 CRAMP1Q96RY5 1269 aa23.9■■□□□ 1.42
LTBP4-223ENST00000598717 CNNM1Q9NRU3 951 aa23.9■■□□□ 1.42
LTBP4-223ENST00000598717 FBXO3Q9UK99 471 aa23.9■■□□□ 1.42
LTBP4-223ENST00000598717 CD2APQ9Y5K6 639 aa23.9■■□□□ 1.42
LTBP4-223ENST00000598717 EYA2O00167 538 aa23.89■■□□□ 1.41
LTBP4-223ENST00000598717 TGFB2P61812 414 aa23.89■■□□□ 1.41
LTBP4-223ENST00000598717 CELF1Q92879 486 aaKnown RBP23.89■■□□□ 1.41
LTBP4-223ENST00000598717 RAB11FIP3O75154 756 aa23.88■■□□□ 1.41
LTBP4-223ENST00000598717 CHRNA5P30532 468 aa23.88■■□□□ 1.41
LTBP4-223ENST00000598717 STYK1Q6J9G0 422 aa23.88■■□□□ 1.41
LTBP4-223ENST00000598717 ERC1Q8IUD2 1116 aa23.88■■□□□ 1.41
LTBP4-223ENST00000598717 ZBTB47Q9UFB7 747 aaPredicted RBP23.88■■□□□ 1.41
LTBP4-223ENST00000598717 APBB1O00213 710 aa23.87■■□□□ 1.41
LTBP4-223ENST00000598717 CIAO1O76071 339 aa23.87■■□□□ 1.41
LTBP4-223ENST00000598717 IL15P40933 162 aaPredicted RBP23.87■■□□□ 1.41
LTBP4-223ENST00000598717 SMC5Q8IY18 1101 aa23.87■■□□□ 1.41
LTBP4-223ENST00000598717 PUS3Q9BZE2 481 aaKnown RBP23.87■■□□□ 1.41
LTBP4-223ENST00000598717 KDM2BQ8NHM5 1336 aa23.86■■□□□ 1.41
LTBP4-223ENST00000598717 BBOX1O75936 387 aa23.86■■□□□ 1.41
LTBP4-223ENST00000598717 LRRC24Q50LG9 513 aa23.86■■□□□ 1.41
LTBP4-223ENST00000598717 CNKSR1Q969H4 720 aa23.86■■□□□ 1.41
LTBP4-223ENST00000598717 BSDC1Q9NW68 430 aaPredicted RBP23.86■■□□□ 1.41
LTBP4-223ENST00000598717 A0A0G2JLW4 131 aa23.85■■□□□ 1.41
LTBP4-223ENST00000598717 DPEP1P16444 411 aa23.85■■□□□ 1.41
LTBP4-223ENST00000598717 ATG9AQ7Z3C6 839 aa23.84■■□□□ 1.41
LTBP4-223ENST00000598717 KIF1BPQ96EK5 621 aa23.84■■□□□ 1.41
LTBP4-223ENST00000598717 KIF13BQ9NQT8 1826 aa23.83■■□□□ 1.41
LTBP4-223ENST00000598717 ANKRD45Q5TZF3 282 aa23.83■■□□□ 1.41
LTBP4-223ENST00000598717 TMC4Q7Z404 712 aa23.83■■□□□ 1.41
LTBP4-223ENST00000598717 RHPN1Q8TCX5 695 aa23.83■■□□□ 1.41
LTBP4-223ENST00000598717 LRRCC1Q9C099 1032 aa23.83■■□□□ 1.41
LTBP4-223ENST00000598717 RIPOR2Q9Y4F9 1068 aa23.83■■□□□ 1.41
LTBP4-223ENST00000598717 COL11A2P13942 1736 aaPredicted RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms