RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 SF3B3Q15393 1217 aaKnown RBP15.26■□□□□ 0.03
ARHGEF1-216ENST00000598587 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
ARHGEF1-216ENST00000598587 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
ARHGEF1-216ENST00000598587 TAOK3Q9H2K8 898 aa15.26■□□□□ 0.03
ARHGEF1-216ENST00000598587 IPO8O15397 1037 aaKnown RBP15.25■□□□□ 0.03
ARHGEF1-216ENST00000598587 BBOX1O75936 387 aa15.25■□□□□ 0.03
ARHGEF1-216ENST00000598587 LMNB1P20700 586 aa15.25■□□□□ 0.03
ARHGEF1-216ENST00000598587 CTSWP56202 376 aa15.25■□□□□ 0.03
ARHGEF1-216ENST00000598587 GRAPQ13588 217 aa15.25■□□□□ 0.03
ARHGEF1-216ENST00000598587 GRAPLQ8TC17 118 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF1-216ENST00000598587 API5Q9BZZ5 524 aaKnown RBP15.25■□□□□ 0.03
ARHGEF1-216ENST00000598587 C9orf78Q9NZ63 289 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF1-216ENST00000598587 ZC3H4Q9UPT8 1303 aaKnown RBP15.24■□□□□ 0.03
ARHGEF1-216ENST00000598587 H7C1W4 665 aa15.24■□□□□ 0.03
ARHGEF1-216ENST00000598587 GRM8O00222 908 aa15.24■□□□□ 0.03
ARHGEF1-216ENST00000598587 RASSF7Q02833 373 aa15.24■□□□□ 0.03
ARHGEF1-216ENST00000598587 RNF181Q9P0P0 153 aa15.24■□□□□ 0.03
ARHGEF1-216ENST00000598587 FKBP4Q02790 459 aaKnown RBP eCLIP15.23■□□□□ 0.03
ARHGEF1-216ENST00000598587 C7orf43Q8WVR3 580 aa15.23■□□□□ 0.03
ARHGEF1-216ENST00000598587 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
ARHGEF1-216ENST00000598587 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
ARHGEF1-216ENST00000598587 RTL9Q8NET4 1388 aa15.23■□□□□ 0.03
ARHGEF1-216ENST00000598587 NFKBIEO00221 500 aa15.22■□□□□ 0.03
ARHGEF1-216ENST00000598587 CCT4P50991 539 aaKnown RBP15.22■□□□□ 0.03
ARHGEF1-216ENST00000598587 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
ARHGEF1-216ENST00000598587 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF1-216ENST00000598587 CDC5LQ99459 802 aaKnown RBP15.22■□□□□ 0.03
ARHGEF1-216ENST00000598587 PSMD1Q99460 953 aa15.22■□□□□ 0.03
ARHGEF1-216ENST00000598587 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
ARHGEF1-216ENST00000598587 ATP6V0A2Q9Y487 856 aa15.22■□□□□ 0.03
ARHGEF1-216ENST00000598587 SP8Q8IXZ3 490 aa15.21■□□□□ 0.03
ARHGEF1-216ENST00000598587 LTBP1Q14766 1721 aa15.2■□□□□ 0.02
ARHGEF1-216ENST00000598587 SNED1Q8TER0 1413 aa15.2■□□□□ 0.02
ARHGEF1-216ENST00000598587 ANKRD18AQ8IVF6 992 aa15.2■□□□□ 0.02
ARHGEF1-216ENST00000598587 SUPT20HQ8NEM7 779 aa15.2■□□□□ 0.02
ARHGEF1-216ENST00000598587 TTLL11Q8NHH1 800 aa15.2■□□□□ 0.02
ARHGEF1-216ENST00000598587 FRAT1Q92837 279 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF1-216ENST00000598587 A0A1B0GUL6 1792 aa15.2■□□□□ 0.02
ARHGEF1-216ENST00000598587 CASP7P55210 303 aa15.19■□□□□ 0.02
ARHGEF1-216ENST00000598587 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
ARHGEF1-216ENST00000598587 DPP8Q6V1X1 898 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF1-216ENST00000598587 HDAC5Q9UQL6 1122 aa15.19■□□□□ 0.02
ARHGEF1-216ENST00000598587 UTYO14607 1347 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 BCAR3O75815 825 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 ZKSCAN2Q63HK3 967 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 ATF7IPQ6VMQ6 1270 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 MPNDQ8N594 471 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 CCDC85AQ96PX6 553 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 COL4A1P02462 1669 aa15.18■□□□□ 0.02
ARHGEF1-216ENST00000598587 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
ARHGEF1-216ENST00000598587 ZNF784Q8NCA9 323 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF1-216ENST00000598587 GREM2Q9H772 168 aa15.17■□□□□ 0.02
ARHGEF1-216ENST00000598587 SEC31BQ9NQW1 1179 aa15.17■□□□□ 0.02
ARHGEF1-216ENST00000598587 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
ARHGEF1-216ENST00000598587 DUOX1Q9NRD9 1551 aa15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 CSF1RP07333 972 aa15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 ITGA6P23229 1130 aa15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 IFIT5Q13325 482 aaKnown RBP15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 FAM161AQ3B820 660 aa15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 FTSJ3Q8IY81 847 aaKnown RBP15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 JDP2Q8WYK2 163 aa15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 GPBP1L1Q9HC44 474 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 ZNF277Q9NRM2 450 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF1-216ENST00000598587 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 TRIM27P14373 513 aa15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 CCDC57Q2TAC2 916 aa15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 TAF7LQ5H9L4 462 aa15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 DPY19L2Q6NUT2 758 aa15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 MPHOSPH8Q99549 860 aa15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 RTFDC1Q9BY42 306 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 ANKIB1Q9P2G1 1089 aa15.15■□□□□ 0.02
ARHGEF1-216ENST00000598587 WDR90Q96KV7 1748 aa15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 UBTFL1P0CB47 393 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 MS4A1P11836 297 aa15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 FOXO4P98177 505 aa15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 INTS3Q68E01 1043 aaKnown RBP15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 LMBR1LQ6UX01 489 aa15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 LARGE2Q8N3Y3 721 aa15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 EYA3Q99504 573 aa15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 NSFL1CQ9UNZ2 370 aaKnown RBP15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 SCN4AP35499 1836 aa15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 XDHP47989 1333 aa15.14■□□□□ 0.01
ARHGEF1-216ENST00000598587 PSME4Q14997 1843 aa15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 PPIP5K2O43314 1243 aa15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 GNAI3P08754 354 aa15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 PRELPP51888 382 aa15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 NIM1KQ8IY84 436 aa15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 ZNF526Q8TF50 670 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 USP44Q9H0E7 712 aa15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 PODXL2Q9NZ53 605 aa15.13■□□□□ 0.01
ARHGEF1-216ENST00000598587 RCAN3Q9UKA8 241 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms