RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DPP8Q6V1X1 898 aaPredicted RBP21.38■■□□□ 1.01
LIG1-205ENST00000593425 PRDM10Q9NQV6 1147 aa21.38■■□□□ 1.01
LIG1-205ENST00000593425 GPRC5DQ9NZD1 345 aa21.38■■□□□ 1.01
LIG1-205ENST00000593425 ZNRF3Q9ULT6 936 aa21.38■■□□□ 1.01
LIG1-205ENST00000593425 WDR33Q9C0J8 1336 aaKnown RBP21.37■■□□□ 1.01
LIG1-205ENST00000593425 TRAF5O00463 557 aa21.37■■□□□ 1.01
LIG1-205ENST00000593425 GRAPQ13588 217 aa21.37■■□□□ 1.01
LIG1-205ENST00000593425 DDX46Q7L014 1031 aaKnown RBP21.37■■□□□ 1.01
LIG1-205ENST00000593425 MPNDQ8N594 471 aa21.37■■□□□ 1.01
LIG1-205ENST00000593425 GRAPLQ8TC17 118 aaPredicted RBP21.37■■□□□ 1.01
LIG1-205ENST00000593425 RUNDC1Q96C34 613 aa21.37■■□□□ 1.01
LIG1-205ENST00000593425 KIAA2012Q0VF49 1180 aa21.36■■□□□ 1.01
LIG1-205ENST00000593425 HDGFL1Q5TGJ6 251 aa21.36■■□□□ 1.01
LIG1-205ENST00000593425 ADARB2Q9NS39 739 aaKnown RBP21.36■■□□□ 1.01
LIG1-205ENST00000593425 GMPSP49915 693 aaPredicted RBP21.34■■□□□ 1.01
LIG1-205ENST00000593425 LBX1P52954 281 aa21.34■■□□□ 1.01
LIG1-205ENST00000593425 WDR43Q15061 677 aaKnown RBP eCLIP21.34■■□□□ 1.01
LIG1-205ENST00000593425 CST9Q5W186 159 aa21.34■■□□□ 1.01
LIG1-205ENST00000593425 PLBD2Q8NHP8 589 aa21.34■■□□□ 1.01
LIG1-205ENST00000593425 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
LIG1-205ENST00000593425 RAD17O75943 681 aa21.33■■□□□ 1.01
LIG1-205ENST00000593425 CIAPIN1Q6FI81 312 aa21.33■■□□□ 1.01
LIG1-205ENST00000593425 ISCA1Q9BUE6 129 aa21.33■■□□□ 1.01
LIG1-205ENST00000593425 YDJCA8MPS7 323 aa21.32■■□□□ 1
LIG1-205ENST00000593425 ATP5J2-PTCD1G3V325 749 aa21.32■■□□□ 1
LIG1-205ENST00000593425 HOXB7P09629 217 aa21.32■■□□□ 1
LIG1-205ENST00000593425 HSPA8P11142 646 aaKnown RBP21.32■■□□□ 1
LIG1-205ENST00000593425 ANKRD13DQ6ZTN6 518 aa21.32■■□□□ 1
LIG1-205ENST00000593425 FAM89AQ96GI7 184 aa21.32■■□□□ 1
LIG1-205ENST00000593425 CAPNS2Q96L46 248 aa21.32■■□□□ 1
LIG1-205ENST00000593425 CYP4F22Q6NT55 531 aa21.31■■□□□ 1
LIG1-205ENST00000593425 PAXIP1Q6ZW49 1069 aaPredicted RBP21.31■■□□□ 1
LIG1-205ENST00000593425 CELF1Q92879 486 aaKnown RBP21.31■■□□□ 1
LIG1-205ENST00000593425 DBF4Q9UBU7 674 aaPredicted RBP21.31■■□□□ 1
LIG1-205ENST00000593425 CDHR2Q9BYE9 1310 aa21.3■■□□□ 1
LIG1-205ENST00000593425 SHTN1A0MZ66 631 aa21.3■■□□□ 1
LIG1-205ENST00000593425 MAP2K1Q02750 393 aaPredicted RBP21.3■■□□□ 1
LIG1-205ENST00000593425 CFAP44Q96MT7 982 aa21.3■■□□□ 1
LIG1-205ENST00000593425 BCL2L13Q9BXK5 485 aa21.3■■□□□ 1
LIG1-205ENST00000593425 GLIS2Q9BZE0 524 aaPredicted RBP21.3■■□□□ 1
LIG1-205ENST00000593425 TLL2Q9Y6L7 1015 aa21.3■■□□□ 1
LIG1-205ENST00000593425 HIRAP54198 1017 aaPredicted RBP21.29■■□□□ 1
LIG1-205ENST00000593425 GRM1Q13255 1194 aa21.29■■□□□ 1
LIG1-205ENST00000593425 SF3B3Q15393 1217 aaKnown RBP21.29■■□□□ 1
LIG1-205ENST00000593425 DUSP27Q5VZP5 1158 aa21.29■■□□□ 1
LIG1-205ENST00000593425 TMC4Q7Z404 712 aa21.29■■□□□ 1
LIG1-205ENST00000593425 TRPM4Q8TD43 1214 aa21.29■■□□□ 1
LIG1-205ENST00000593425 MBIPQ9NS73 344 aa21.29■■□□□ 1
LIG1-205ENST00000593425 ECE1P42892 770 aa21.28■■□□□ 1
LIG1-205ENST00000593425 TNIP1Q15025 636 aa21.28■■□□□ 1
LIG1-205ENST00000593425 RTL5Q5HYW3 569 aaPredicted RBP21.28■■□□□ 1
LIG1-205ENST00000593425 PGAP2Q9UHJ9 254 aa21.28■■□□□ 1
LIG1-205ENST00000593425 GPR101Q96P66 508 aaPredicted RBP21.27■■□□□ 1
LIG1-205ENST00000593425 HYPKQ9NX55 129 aa21.27■■□□□ 1
LIG1-205ENST00000593425 CELF2O95319 508 aaKnown RBP21.26■□□□□ 0.99
LIG1-205ENST00000593425 DBNDD1Q9H9R9 158 aa21.26■□□□□ 0.99
LIG1-205ENST00000593425 CNOT7Q9UIV1 285 aaKnown RBP21.26■□□□□ 0.99
LIG1-205ENST00000593425 NSFL1CQ9UNZ2 370 aaKnown RBP21.26■□□□□ 0.99
LIG1-205ENST00000593425 ZBTB12Q9Y330 459 aaPredicted RBP21.26■□□□□ 0.99
LIG1-205ENST00000593425 AOC2O75106 756 aa21.25■□□□□ 0.99
LIG1-205ENST00000593425 ZNF853P0CG23 659 aa21.25■□□□□ 0.99
LIG1-205ENST00000593425 GPSM2P81274 684 aa21.25■□□□□ 0.99
LIG1-205ENST00000593425 WASHC4Q2M389 1173 aa21.25■□□□□ 0.99
LIG1-205ENST00000593425 SAPCD2Q86UD0 394 aa21.25■□□□□ 0.99
LIG1-205ENST00000593425 POLLQ9UGP5 575 aa21.25■□□□□ 0.99
LIG1-205ENST00000593425 IRS4O14654 1257 aaPredicted RBP21.24■□□□□ 0.99
LIG1-205ENST00000593425 RIMBP2O15034 1052 aa21.24■□□□□ 0.99
LIG1-205ENST00000593425 TRIM28Q13263 835 aaKnown RBP21.24■□□□□ 0.99
LIG1-205ENST00000593425 MICALL2Q8IY33 904 aa21.24■□□□□ 0.99
LIG1-205ENST00000593425 ZC3H15Q8WU90 426 aaKnown RBP21.24■□□□□ 0.99
LIG1-205ENST00000593425 PHAXQ9H814 394 aaKnown RBP21.24■□□□□ 0.99
LIG1-205ENST00000593425 PRKRIP1Q9H875 184 aaPredicted RBP21.24■□□□□ 0.99
LIG1-205ENST00000593425 PSMD14O00487 310 aa21.23■□□□□ 0.99
LIG1-205ENST00000593425 ZNF408Q9H9D4 720 aa21.23■□□□□ 0.99
LIG1-205ENST00000593425 SCN9AQ15858 1988 aa21.23■□□□□ 0.99
LIG1-205ENST00000593425 C6orf229H3BNL8 230 aa21.22■□□□□ 0.99
LIG1-205ENST00000593425 APAF1O14727 1248 aa21.22■□□□□ 0.99
LIG1-205ENST00000593425 RIC3Q7Z5B4 369 aa21.22■□□□□ 0.99
LIG1-205ENST00000593425 RTL9Q8NET4 1388 aa21.22■□□□□ 0.99
LIG1-205ENST00000593425 H7C1D1 291 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 ELL2O00472 640 aaPredicted RBP21.21■□□□□ 0.99
LIG1-205ENST00000593425 ECE2O60344 883 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 GOLGA2Q08379 1002 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 DLK2Q6UY11 383 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 CDC37L1Q7L3B6 337 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 SAMD7Q7Z3H4 446 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 KCNQ5Q9NR82 932 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 IFT57Q9NWB7 429 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 TSKSQ9UJT2 592 aa21.21■□□□□ 0.99
LIG1-205ENST00000593425 EGFRP00533 1210 aa21.2■□□□□ 0.98
LIG1-205ENST00000593425 MAP2K2P36507 400 aa21.2■□□□□ 0.98
LIG1-205ENST00000593425 RPS8P62241 208 aaKnown RBP21.2■□□□□ 0.98
LIG1-205ENST00000593425 DOK7Q18PE1 504 aa21.2■□□□□ 0.98
LIG1-205ENST00000593425 ZBTB38Q8NAP3 1195 aaPredicted RBP21.2■□□□□ 0.98
LIG1-205ENST00000593425 TBC1D16Q8TBP0 767 aa21.2■□□□□ 0.98
LIG1-205ENST00000593425 DPF2Q92785 391 aa21.2■□□□□ 0.98
LIG1-205ENST00000593425 MYD88Q99836 296 aa21.2■□□□□ 0.98
LIG1-205ENST00000593425 BEGAINQ9BUH8 593 aa21.2■□□□□ 0.98
LIG1-205ENST00000593425 SEC31BQ9NQW1 1179 aa21.2■□□□□ 0.98
LIG1-205ENST00000593425 GNAI1P63096 354 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms