RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
DNMT1-229ENST00000593049 H7C1W4 665 aa20.86■□□□□ 0.93
DNMT1-229ENST00000593049 SSH1Q8WYL5 1049 aa20.86■□□□□ 0.93
DNMT1-229ENST00000593049 TIAM2Q8IVF5 1701 aa20.86■□□□□ 0.93
DNMT1-229ENST00000593049 KDM2BQ8NHM5 1336 aa20.85■□□□□ 0.93
DNMT1-229ENST00000593049 MYH3P11055 1940 aa20.85■□□□□ 0.93
DNMT1-229ENST00000593049 F6X3S4 739 aa20.85■□□□□ 0.93
DNMT1-229ENST00000593049 PRELPP51888 382 aa20.85■□□□□ 0.93
DNMT1-229ENST00000593049 SP8Q8IXZ3 490 aa20.85■□□□□ 0.93
DNMT1-229ENST00000593049 ALDH1L1O75891 902 aa20.84■□□□□ 0.93
DNMT1-229ENST00000593049 BEND3Q5T5X7 828 aa20.84■□□□□ 0.93
DNMT1-229ENST00000593049 OLFM4Q6UX06 510 aa20.84■□□□□ 0.93
DNMT1-229ENST00000593049 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
DNMT1-229ENST00000593049 ZNF526Q8TF50 670 aaPredicted RBP20.84■□□□□ 0.93
DNMT1-229ENST00000593049 SMC4Q9NTJ3 1288 aa20.84■□□□□ 0.93
DNMT1-229ENST00000593049 SNED1Q8TER0 1413 aa20.84■□□□□ 0.93
DNMT1-229ENST00000593049 CTSWP56202 376 aa20.83■□□□□ 0.93
DNMT1-229ENST00000593049 SUPT20HQ8NEM7 779 aa20.83■□□□□ 0.93
DNMT1-229ENST00000593049 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
DNMT1-229ENST00000593049 IARSP41252 1262 aaKnown RBP20.82■□□□□ 0.92
DNMT1-229ENST00000593049 BRPF1P55201 1214 aaPredicted RBP20.82■□□□□ 0.92
DNMT1-229ENST00000593049 SLC4A10Q6U841 1118 aa20.82■□□□□ 0.92
DNMT1-229ENST00000593049 JARID2Q92833 1246 aaPredicted RBP20.82■□□□□ 0.92
DNMT1-229ENST00000593049 PLA2G12BQ9BX93 195 aa20.82■□□□□ 0.92
DNMT1-229ENST00000593049 SRCIN1Q9C0H9 1055 aa20.82■□□□□ 0.92
DNMT1-229ENST00000593049 VPS33BQ9H267 617 aa20.82■□□□□ 0.92
DNMT1-229ENST00000593049 ZNF277Q9NRM2 450 aaPredicted RBP20.82■□□□□ 0.92
DNMT1-229ENST00000593049 RPS8P62241 208 aaKnown RBP20.81■□□□□ 0.92
DNMT1-229ENST00000593049 DPY19L2Q6NUT2 758 aa20.81■□□□□ 0.92
DNMT1-229ENST00000593049 TAF1P21675 1872 aa20.81■□□□□ 0.92
DNMT1-229ENST00000593049 GLTPD2A6NH11 291 aa20.8■□□□□ 0.92
DNMT1-229ENST00000593049 DPP8Q6V1X1 898 aaPredicted RBP20.8■□□□□ 0.92
DNMT1-229ENST00000593049 MPNDQ8N594 471 aa20.8■□□□□ 0.92
DNMT1-229ENST00000593049 CDC5LQ99459 802 aaKnown RBP20.8■□□□□ 0.92
DNMT1-229ENST00000593049 BCL2L13Q9BXK5 485 aa20.8■□□□□ 0.92
DNMT1-229ENST00000593049 LRRC37AA6NMS7 1700 aa20.8■□□□□ 0.92
DNMT1-229ENST00000593049 RTL9Q8NET4 1388 aa20.8■□□□□ 0.92
DNMT1-229ENST00000593049 CASP7P55210 303 aa20.79■□□□□ 0.92
DNMT1-229ENST00000593049 TTLL11Q8NHH1 800 aa20.79■□□□□ 0.92
DNMT1-229ENST00000593049 JDP2Q8WYK2 163 aa20.79■□□□□ 0.92
DNMT1-229ENST00000593049 CELF1Q92879 486 aaKnown RBP20.79■□□□□ 0.92
DNMT1-229ENST00000593049 RTFDC1Q9BY42 306 aaPredicted RBP20.79■□□□□ 0.92
DNMT1-229ENST00000593049 GRM8O00222 908 aa20.78■□□□□ 0.92
DNMT1-229ENST00000593049 RARSP54136 660 aaKnown RBP20.78■□□□□ 0.92
DNMT1-229ENST00000593049 ANKRD18AQ8IVF6 992 aa20.78■□□□□ 0.92
DNMT1-229ENST00000593049 C9orf78Q9NZ63 289 aaPredicted RBP20.78■□□□□ 0.92
DNMT1-229ENST00000593049 KIF16BQ96L93 1317 aa20.77■□□□□ 0.91
DNMT1-229ENST00000593049 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
DNMT1-229ENST00000593049 SEC31BQ9NQW1 1179 aa20.76■□□□□ 0.91
DNMT1-229ENST00000593049 CSF1RP07333 972 aa20.75■□□□□ 0.91
DNMT1-229ENST00000593049 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
DNMT1-229ENST00000593049 CCDC85AQ96PX6 553 aaPredicted RBP20.75■□□□□ 0.91
DNMT1-229ENST00000593049 FZD9O00144 591 aa20.74■□□□□ 0.91
DNMT1-229ENST00000593049 KIF3CO14782 793 aa20.74■□□□□ 0.91
DNMT1-229ENST00000593049 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
DNMT1-229ENST00000593049 ARHGAP45Q92619 1136 aa20.74■□□□□ 0.91
DNMT1-229ENST00000593049 GREM2Q9H772 168 aa20.74■□□□□ 0.91
DNMT1-229ENST00000593049 IGHMBP2P38935 993 aaKnown RBP20.73■□□□□ 0.91
DNMT1-229ENST00000593049 NIM1KQ8IY84 436 aa20.73■□□□□ 0.91
DNMT1-229ENST00000593049 NMRK2Q9NPI5 230 aa20.73■□□□□ 0.91
DNMT1-229ENST00000593049 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
DNMT1-229ENST00000593049 NSFL1CQ9UNZ2 370 aaKnown RBP20.73■□□□□ 0.91
DNMT1-229ENST00000593049 UTYO14607 1347 aa20.73■□□□□ 0.91
DNMT1-229ENST00000593049 WDR90Q96KV7 1748 aa20.73■□□□□ 0.91
DNMT1-229ENST00000593049 IPO8O15397 1037 aaKnown RBP20.72■□□□□ 0.91
DNMT1-229ENST00000593049 VEGFAP15692 232 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-229ENST00000593049 ITGA6P23229 1130 aa20.72■□□□□ 0.91
DNMT1-229ENST00000593049 CCT4P50991 539 aaKnown RBP20.72■□□□□ 0.91
DNMT1-229ENST00000593049 EIF6P56537 245 aaKnown RBP20.72■□□□□ 0.91
DNMT1-229ENST00000593049 KIAA2012Q0VF49 1180 aa20.72■□□□□ 0.91
DNMT1-229ENST00000593049 C16orf71Q8IYS4 520 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-229ENST00000593049 EYA3Q99504 573 aa20.72■□□□□ 0.91
DNMT1-229ENST00000593049 BSDC1Q9NW68 430 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-229ENST00000593049 PODXL2Q9NZ53 605 aa20.72■□□□□ 0.91
DNMT1-229ENST00000593049 C1QTNF8P60827 252 aa20.71■□□□□ 0.91
DNMT1-229ENST00000593049 FOXO4P98177 505 aa20.71■□□□□ 0.91
DNMT1-229ENST00000593049 AOC3Q16853 763 aa20.71■□□□□ 0.91
DNMT1-229ENST00000593049 SLC51AQ86UW1 340 aa20.71■□□□□ 0.91
DNMT1-229ENST00000593049 RRAGCQ9HB90 399 aa20.71■□□□□ 0.91
DNMT1-229ENST00000593049 ANKIB1Q9P2G1 1089 aa20.71■□□□□ 0.91
DNMT1-229ENST00000593049 COL4A1P02462 1669 aa20.7■□□□□ 0.91
DNMT1-229ENST00000593049 ANKRD18BA2A2Z9 1011 aa20.7■□□□□ 0.9
DNMT1-229ENST00000593049 C6orf229H3BNL8 230 aa20.7■□□□□ 0.9
DNMT1-229ENST00000593049 GPSM2P81274 684 aa20.7■□□□□ 0.9
DNMT1-229ENST00000593049 FAM161AQ3B820 660 aa20.7■□□□□ 0.9
DNMT1-229ENST00000593049 MPHOSPH8Q99549 860 aa20.7■□□□□ 0.9
DNMT1-229ENST00000593049 LTBP1Q14766 1721 aa20.7■□□□□ 0.9
DNMT1-229ENST00000593049 DUOX1Q9NRD9 1551 aa20.69■□□□□ 0.9
DNMT1-229ENST00000593049 TOMM70O94826 608 aa20.69■□□□□ 0.9
DNMT1-229ENST00000593049 DDNO94850 711 aaPredicted RBP20.69■□□□□ 0.9
DNMT1-229ENST00000593049 IFIT5Q13325 482 aaKnown RBP20.69■□□□□ 0.9
DNMT1-229ENST00000593049 WASHC4Q2M389 1173 aa20.69■□□□□ 0.9
DNMT1-229ENST00000593049 GPC2Q8N158 579 aa20.69■□□□□ 0.9
DNMT1-229ENST00000593049 GGA1Q9UJY5 639 aa20.69■□□□□ 0.9
DNMT1-229ENST00000593049 XDHP47989 1333 aa20.69■□□□□ 0.9
DNMT1-229ENST00000593049 IQCA1LA6NCM1 817 aa20.68■□□□□ 0.9
DNMT1-229ENST00000593049 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
DNMT1-229ENST00000593049 L3MBTL3Q96JM7 780 aaPredicted RBP20.68■□□□□ 0.9
DNMT1-229ENST00000593049 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
DNMT1-229ENST00000593049 HDAC5Q9UQL6 1122 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms