RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 ZNF34Q8IZ26 560 aa31.51■■■□□ 2.63
RUNDC3A-206ENST00000590941 USP21Q9UK80 565 aa31.51■■■□□ 2.63
RUNDC3A-206ENST00000590941 MYH3P11055 1940 aa31.51■■■□□ 2.63
RUNDC3A-206ENST00000590941 FAM89AQ96GI7 184 aa31.5■■■□□ 2.63
RUNDC3A-206ENST00000590941 TAF7LQ5H9L4 462 aa31.49■■■□□ 2.63
RUNDC3A-206ENST00000590941 CERKQ8TCT0 537 aa31.49■■■□□ 2.63
RUNDC3A-206ENST00000590941 CEP126Q9P2H0 1117 aa31.49■■■□□ 2.63
RUNDC3A-206ENST00000590941 SPEF2Q9C093 1822 aa31.49■■■□□ 2.63
RUNDC3A-206ENST00000590941 RGL2O15211 777 aa31.48■■■□□ 2.63
RUNDC3A-206ENST00000590941 PARP10Q53GL7 1025 aa31.48■■■□□ 2.63
RUNDC3A-206ENST00000590941 HAUS7Q99871 368 aa31.48■■■□□ 2.63
RUNDC3A-206ENST00000590941 GPTP24298 496 aa31.48■■■□□ 2.63
RUNDC3A-206ENST00000590941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.48■■■□□ 2.63
RUNDC3A-206ENST00000590941 DBNDD2Q9BQY9 259 aa31.48■■■□□ 2.63
RUNDC3A-206ENST00000590941 CWC22Q9HCG8 908 aaKnown RBP31.48■■■□□ 2.63
RUNDC3A-206ENST00000590941 TRMT112Q9UI30 125 aaKnown RBP31.48■■■□□ 2.63
RUNDC3A-206ENST00000590941 PDE8AO60658 829 aa31.47■■■□□ 2.63
RUNDC3A-206ENST00000590941 FRAT2O75474 233 aaPredicted RBP31.47■■■□□ 2.63
RUNDC3A-206ENST00000590941 NEK4P51957 841 aa31.47■■■□□ 2.63
RUNDC3A-206ENST00000590941 CTSWP56202 376 aa31.47■■■□□ 2.63
RUNDC3A-206ENST00000590941 IL25Q9H293 177 aa31.47■■■□□ 2.63
RUNDC3A-206ENST00000590941 TBC1D2BQ9UPU7 963 aa31.46■■■□□ 2.63
RUNDC3A-206ENST00000590941 IRS4O14654 1257 aaPredicted RBP31.45■■■□□ 2.63
RUNDC3A-206ENST00000590941 ZNF652Q9Y2D9 606 aa31.45■■■□□ 2.63
RUNDC3A-206ENST00000590941 ITPK1Q13572 414 aa31.44■■■□□ 2.62
RUNDC3A-206ENST00000590941 NHSQ6T4R5 1651 aa31.44■■■□□ 2.62
RUNDC3A-206ENST00000590941 PALD1Q9ULE6 856 aa31.44■■■□□ 2.62
RUNDC3A-206ENST00000590941 CCDC171Q6TFL3 1326 aa31.44■■■□□ 2.62
RUNDC3A-206ENST00000590941 ANKRD18BA2A2Z9 1011 aa31.44■■■□□ 2.62
RUNDC3A-206ENST00000590941 LRRC24Q50LG9 513 aa31.43■■■□□ 2.62
RUNDC3A-206ENST00000590941 TTLL11Q8NHH1 800 aa31.43■■■□□ 2.62
RUNDC3A-206ENST00000590941 BCORQ6W2J9 1755 aa31.42■■■□□ 2.62
RUNDC3A-206ENST00000590941 NMIQ13287 307 aaPredicted RBP31.42■■■□□ 2.62
RUNDC3A-206ENST00000590941 ZNF594Q96JF6 807 aaPredicted RBP31.42■■■□□ 2.62
RUNDC3A-206ENST00000590941 NEUROD6Q96NK8 337 aa31.42■■■□□ 2.62
RUNDC3A-206ENST00000590941 ABCC12Q96J65 1359 aa31.42■■■□□ 2.62
RUNDC3A-206ENST00000590941 MED23Q9ULK4 1368 aa31.41■■■□□ 2.62
RUNDC3A-206ENST00000590941 CNTNAP4Q9C0A0 1308 aa31.41■■■□□ 2.62
RUNDC3A-206ENST00000590941 A0A1B0GUL7 405 aa31.41■■■□□ 2.62
RUNDC3A-206ENST00000590941 CAMTA2O94983 1202 aa31.41■■■□□ 2.62
RUNDC3A-206ENST00000590941 KCNB2Q92953 911 aa31.41■■■□□ 2.62
RUNDC3A-206ENST00000590941 UBN2Q6ZU65 1347 aa31.4■■■□□ 2.62
RUNDC3A-206ENST00000590941 SH3TC1Q8TE82 1336 aa31.4■■■□□ 2.62
RUNDC3A-206ENST00000590941 RAB3GAP1Q15042 981 aa31.4■■■□□ 2.62
RUNDC3A-206ENST00000590941 MEX3CQ5U5Q3 659 aaKnown RBP31.4■■■□□ 2.62
RUNDC3A-206ENST00000590941 LRRFIP1Q32MZ4 808 aaKnown RBP31.39■■■□□ 2.62
RUNDC3A-206ENST00000590941 SNX14Q9Y5W7 946 aa31.39■■■□□ 2.62
RUNDC3A-206ENST00000590941 LAMB2P55268 1798 aa31.39■■■□□ 2.62
RUNDC3A-206ENST00000590941 KCNQ2O43526 872 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 PTMSP20962 102 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 ITGA6P23229 1130 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 NUCB2P80303 420 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 CCDC158Q5M9N0 1113 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 CLEC4GQ6UXB4 293 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 KBTBD3Q8NAB2 608 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 UTP14AQ9BVJ6 771 aaKnown RBP31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 TM6SF1Q9BZW5 370 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 LRP5O75197 1615 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 ZKSCAN1P17029 563 aaPredicted RBP31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 RNF20Q5VTR2 975 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 GBP4Q96PP9 640 aa31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 MYH14Q7Z406 1995 aaKnown RBP31.38■■■□□ 2.61
RUNDC3A-206ENST00000590941 MAP4K1Q92918 833 aa31.37■■■□□ 2.61
RUNDC3A-206ENST00000590941 DNAJC2Q99543 621 aaKnown RBP31.37■■■□□ 2.61
RUNDC3A-206ENST00000590941 DDX11L8A8MPP1 907 aa31.36■■■□□ 2.61
RUNDC3A-206ENST00000590941 FAM227BQ96M60 508 aa31.36■■■□□ 2.61
RUNDC3A-206ENST00000590941 PUS3Q9BZE2 481 aaKnown RBP31.36■■■□□ 2.61
RUNDC3A-206ENST00000590941 RC3H1Q5TC82 1133 aaKnown RBP31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 INTS4Q96HW7 963 aaKnown RBP31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 GREM2Q9H772 168 aa31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 PAG1Q9NWQ8 432 aa31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 RTL9Q8NET4 1388 aa31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 MCM4P33991 863 aa31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 TIMM10P62072 90 aa31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 LDHAL6AQ6ZMR3 332 aa31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 HMG20BQ9P0W2 317 aa31.35■■■□□ 2.61
RUNDC3A-206ENST00000590941 BTAF1O14981 1849 aa31.34■■■□□ 2.61
RUNDC3A-206ENST00000590941 A0A0D9SFI3 127 aa31.34■■■□□ 2.61
RUNDC3A-206ENST00000590941 IFIT1P09914 478 aaKnown RBP31.34■■■□□ 2.61
RUNDC3A-206ENST00000590941 KCNJ4P48050 445 aa31.34■■■□□ 2.61
RUNDC3A-206ENST00000590941 NECTIN1Q15223 517 aa31.34■■■□□ 2.61
RUNDC3A-206ENST00000590941 GJD4Q96KN9 370 aaPredicted RBP31.34■■■□□ 2.61
RUNDC3A-206ENST00000590941 RIPOR2Q9Y4F9 1068 aa31.34■■■□□ 2.61
RUNDC3A-206ENST00000590941 RIC1Q4ADV7 1423 aa31.34■■■□□ 2.61
RUNDC3A-206ENST00000590941 PTH1RQ03431 593 aa31.33■■■□□ 2.61
RUNDC3A-206ENST00000590941 CUL4AQ13619 759 aa31.33■■■□□ 2.61
RUNDC3A-206ENST00000590941 GORABQ5T7V8 394 aa31.33■■■□□ 2.61
RUNDC3A-206ENST00000590941 TMX3Q96JJ7 454 aa31.33■■■□□ 2.61
RUNDC3A-206ENST00000590941 METTL24Q5JXM2 366 aa31.32■■■□□ 2.6
RUNDC3A-206ENST00000590941 CNNM1Q9NRU3 951 aa31.32■■■□□ 2.6
RUNDC3A-206ENST00000590941 RBM8AQ9Y5S9 174 aaKnown RBP31.32■■■□□ 2.6
RUNDC3A-206ENST00000590941 ATRNO75882 1429 aa31.32■■■□□ 2.6
RUNDC3A-206ENST00000590941 SUSD4Q5VX71 490 aa31.32■■■□□ 2.6
RUNDC3A-206ENST00000590941 SCN7AQ01118 1682 aa31.31■■■□□ 2.6
RUNDC3A-206ENST00000590941 PSMA5P28066 241 aa31.31■■■□□ 2.6
RUNDC3A-206ENST00000590941 TTC39AQ5SRH9 613 aa31.31■■■□□ 2.6
RUNDC3A-206ENST00000590941 HELLSQ9NRZ9 838 aa31.31■■■□□ 2.6
RUNDC3A-206ENST00000590941 MROH5Q6ZUA9 1318 aa31.31■■■□□ 2.6
RUNDC3A-206ENST00000590941 ATP2B3Q16720 1220 aa31.3■■■□□ 2.6
RUNDC3A-206ENST00000590941 MCMDC2Q4G0Z9 681 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms