RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ESCO1Q5FWF5 840 aa14.67□□□□□ -0.06
PDE4A-207ENST00000590407 GTF3C6Q969F1 213 aa14.67□□□□□ -0.06
PDE4A-207ENST00000590407 BOLA2Q9H3K6 86 aa14.67□□□□□ -0.06
PDE4A-207ENST00000590407 KCNF1Q9H3M0 494 aa14.67□□□□□ -0.06
PDE4A-207ENST00000590407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.67□□□□□ -0.06
PDE4A-207ENST00000590407 TLR7Q9NYK1 1049 aaKnown RBP14.67□□□□□ -0.06
PDE4A-207ENST00000590407 C5P01031 1676 aa14.66□□□□□ -0.06
PDE4A-207ENST00000590407 RFX5P48382 616 aaPredicted RBP14.66□□□□□ -0.06
PDE4A-207ENST00000590407 ZNF790Q6PG37 636 aa14.66□□□□□ -0.06
PDE4A-207ENST00000590407 RIC3Q7Z5B4 369 aa14.66□□□□□ -0.06
PDE4A-207ENST00000590407 TDRD7Q8NHU6 1098 aaKnown RBP14.66□□□□□ -0.06
PDE4A-207ENST00000590407 SPATA32Q96LK8 384 aa14.66□□□□□ -0.06
PDE4A-207ENST00000590407 LLPHQ9BRT6 129 aaKnown RBP14.66□□□□□ -0.06
PDE4A-207ENST00000590407 ZSCAN16Q9H4T2 348 aaPredicted RBP14.66□□□□□ -0.06
PDE4A-207ENST00000590407 TMEM94Q12767 1356 aa14.66□□□□□ -0.06
PDE4A-207ENST00000590407 PRAMEF22A3QJZ6 481 aa14.65□□□□□ -0.06
PDE4A-207ENST00000590407 KIF1AQ12756 1690 aa14.65□□□□□ -0.06
PDE4A-207ENST00000590407 RESTQ13127 1097 aa14.65□□□□□ -0.06
PDE4A-207ENST00000590407 ZNF589Q86UQ0 364 aaPredicted RBP14.65□□□□□ -0.06
PDE4A-207ENST00000590407 TNMDQ9H2S6 317 aa14.65□□□□□ -0.06
PDE4A-207ENST00000590407 LRP10Q7Z4F1 713 aa14.65□□□□□ -0.06
PDE4A-207ENST00000590407 SLC52A2Q9HAB3 445 aa14.65□□□□□ -0.06
PDE4A-207ENST00000590407 KIF3AQ9Y496 699 aa14.65□□□□□ -0.06
PDE4A-207ENST00000590407 KDM6AO15550 1401 aaPredicted RBP14.64□□□□□ -0.07
PDE4A-207ENST00000590407 GOLGA6L4A6NEF3 574 aa14.64□□□□□ -0.07
PDE4A-207ENST00000590407 HMGB1P09429 215 aaKnown RBP14.64□□□□□ -0.07
PDE4A-207ENST00000590407 CDC25BP30305 580 aa14.64□□□□□ -0.07
PDE4A-207ENST00000590407 TNNI3KQ59H18 835 aa14.64□□□□□ -0.07
PDE4A-207ENST00000590407 ATL3Q6DD88 541 aa14.64□□□□□ -0.07
PDE4A-207ENST00000590407 NEK1Q96PY6 1258 aa14.64□□□□□ -0.07
PDE4A-207ENST00000590407 CCDC94Q9BW85 323 aaPredicted RBP14.64□□□□□ -0.07
PDE4A-207ENST00000590407 DACT1Q9NYF0 836 aa14.64□□□□□ -0.07
PDE4A-207ENST00000590407 FPGT-TNNI3KV9GXZ4 949 aa14.64□□□□□ -0.07
PDE4A-207ENST00000590407 ERBB3P21860 1342 aa14.63□□□□□ -0.07
PDE4A-207ENST00000590407 SH3TC1Q8TE82 1336 aa14.63□□□□□ -0.07
PDE4A-207ENST00000590407 PLA2G4DQ86XP0 818 aa14.63□□□□□ -0.07
PDE4A-207ENST00000590407 SMAP1Q8IYB5 467 aaPredicted RBP14.63□□□□□ -0.07
PDE4A-207ENST00000590407 SMARCC2Q8TAQ2 1214 aa14.63□□□□□ -0.07
PDE4A-207ENST00000590407 HAUS7Q99871 368 aa14.63□□□□□ -0.07
PDE4A-207ENST00000590407 CBX8Q9HC52 389 aa14.63□□□□□ -0.07
PDE4A-207ENST00000590407 DBNLQ9UJU6 430 aaKnown RBP14.63□□□□□ -0.07
PDE4A-207ENST00000590407 CFAP45Q9UL16 551 aa14.63□□□□□ -0.07
PDE4A-207ENST00000590407 PYCARDQ9ULZ3 195 aa14.63□□□□□ -0.07
PDE4A-207ENST00000590407 PTPN12Q05209 780 aaKnown RBP14.62□□□□□ -0.07
PDE4A-207ENST00000590407 CHAF1AQ13111 956 aaPredicted RBP14.62□□□□□ -0.07
PDE4A-207ENST00000590407 COL9A3Q14050 684 aaPredicted RBP14.62□□□□□ -0.07
PDE4A-207ENST00000590407 EPHA10Q5JZY3 1008 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 NAA16Q6N069 864 aaPredicted RBP14.62□□□□□ -0.07
PDE4A-207ENST00000590407 FERMT3Q86UX7 667 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 DDX54Q8TDD1 881 aaKnown RBP14.62□□□□□ -0.07
PDE4A-207ENST00000590407 XAGE3Q8WTP9 111 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 TAF6LQ9Y6J9 622 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 ZNF609O15014 1411 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 CTAGE5O15320 804 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 MCMDC2Q4G0Z9 681 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 PGBD1Q96JS3 809 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 AGXT2Q9BYV1 514 aa14.62□□□□□ -0.07
PDE4A-207ENST00000590407 CTIFO43310 598 aaKnown RBP14.61□□□□□ -0.07
PDE4A-207ENST00000590407 PFKFB2O60825 505 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 ZNF75DP51815 510 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 AIMP1Q12904 312 aaKnown RBP14.61□□□□□ -0.07
PDE4A-207ENST00000590407 ANO6Q4KMQ2 910 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 SARM1Q6SZW1 724 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 ANKRD13DQ6ZTN6 518 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 COPS6Q7L5N1 327 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 ZNF710Q8N1W2 664 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 SIL1Q9H173 461 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 GPR108Q9NPR9 543 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 AXIN2Q9Y2T1 843 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 ALS2Q96Q42 1657 aa14.61□□□□□ -0.07
PDE4A-207ENST00000590407 ZBTB7CA1YPR0 619 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 SYCP1Q15431 976 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 C17orf53Q8N3J3 647 aaPredicted RBP14.6□□□□□ -0.07
PDE4A-207ENST00000590407 MPNDQ8N594 471 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 BRF1Q92994 677 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 MYD88Q99836 296 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 SNRPA1P09661 255 aaKnown RBP14.6□□□□□ -0.07
PDE4A-207ENST00000590407 PHKG2P15735 406 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 CASP7P55210 303 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 PLCB2Q00722 1185 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 LUZP1Q86V48 1076 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 KBTBD3Q8NAB2 608 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 RAPGEF4Q8WZA2 1011 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 DSCC1Q9BVC3 393 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 HELLSQ9NRZ9 838 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 RCOR1Q9UKL0 485 aa14.6□□□□□ -0.07
PDE4A-207ENST00000590407 SPEF2Q9C093 1822 aa14.59□□□□□ -0.07
PDE4A-207ENST00000590407 MYH15Q9Y2K3 1946 aa14.59□□□□□ -0.07
PDE4A-207ENST00000590407 ARFGEF2Q9Y6D5 1785 aa14.59□□□□□ -0.07
PDE4A-207ENST00000590407 TFCP2Q12800 502 aa14.59□□□□□ -0.07
PDE4A-207ENST00000590407 Q6ZUG5 572 aa14.59□□□□□ -0.07
PDE4A-207ENST00000590407 FBXL16Q8N461 479 aa14.59□□□□□ -0.07
PDE4A-207ENST00000590407 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
PDE4A-207ENST00000590407 TFIP11Q9UBB9 837 aaKnown RBP14.59□□□□□ -0.07
PDE4A-207ENST00000590407 LAMB4A4D0S4 1761 aa14.59□□□□□ -0.07
PDE4A-207ENST00000590407 AFDNP55196 1824 aaKnown RBP14.58□□□□□ -0.07
PDE4A-207ENST00000590407 JAK2O60674 1132 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms