RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 SUPT20HQ8NEM7 779 aa21.18■□□□□ 0.98
MBD3-206ENST00000589901 ISCA1Q9BUE6 129 aa21.18■□□□□ 0.98
MBD3-206ENST00000589901 ZNRF3Q9ULT6 936 aa21.18■□□□□ 0.98
MBD3-206ENST00000589901 ZNF853P0CG23 659 aa21.17■□□□□ 0.98
MBD3-206ENST00000589901 FAM89AQ96GI7 184 aa21.17■□□□□ 0.98
MBD3-206ENST00000589901 HYPKQ9NX55 129 aa21.17■□□□□ 0.98
MBD3-206ENST00000589901 FMR1Q06787 632 aaKnown RBP eCLIP21.16■□□□□ 0.98
MBD3-206ENST00000589901 LAMB2P55268 1798 aa21.15■□□□□ 0.98
MBD3-206ENST00000589901 CAPN15O75808 1086 aa21.15■□□□□ 0.98
MBD3-206ENST00000589901 KIAA2012Q0VF49 1180 aa21.15■□□□□ 0.98
MBD3-206ENST00000589901 RTL5Q5HYW3 569 aaPredicted RBP21.15■□□□□ 0.98
MBD3-206ENST00000589901 USP50Q70EL3 339 aaPredicted RBP21.15■□□□□ 0.98
MBD3-206ENST00000589901 GPRC5DQ9NZD1 345 aa21.15■□□□□ 0.98
MBD3-206ENST00000589901 ELL2O00472 640 aaPredicted RBP21.14■□□□□ 0.97
MBD3-206ENST00000589901 FOXN1O15353 648 aa21.14■□□□□ 0.97
MBD3-206ENST00000589901 RASSF10A6NK89 507 aa21.13■□□□□ 0.97
MBD3-206ENST00000589901 RAD17O75943 681 aa21.13■□□□□ 0.97
MBD3-206ENST00000589901 GMPSP49915 693 aaPredicted RBP21.13■□□□□ 0.97
MBD3-206ENST00000589901 DEFB115Q30KQ5 88 aa21.13■□□□□ 0.97
MBD3-206ENST00000589901 CELF1Q92879 486 aaKnown RBP21.13■□□□□ 0.97
MBD3-206ENST00000589901 PHAXQ9H814 394 aaKnown RBP21.13■□□□□ 0.97
MBD3-206ENST00000589901 IFT57Q9NWB7 429 aa21.13■□□□□ 0.97
MBD3-206ENST00000589901 TRAF5O00463 557 aa21.12■□□□□ 0.97
MBD3-206ENST00000589901 SF3B3Q15393 1217 aaKnown RBP21.12■□□□□ 0.97
MBD3-206ENST00000589901 CIAPIN1Q6FI81 312 aa21.12■□□□□ 0.97
MBD3-206ENST00000589901 TMC4Q7Z404 712 aa21.12■□□□□ 0.97
MBD3-206ENST00000589901 ADARB2Q9NS39 739 aaKnown RBP21.12■□□□□ 0.97
MBD3-206ENST00000589901 ABT1Q9ULW3 272 aaKnown RBP21.12■□□□□ 0.97
MBD3-206ENST00000589901 GNAI1P63096 354 aa21.11■□□□□ 0.97
MBD3-206ENST00000589901 TRIM28Q13263 835 aaKnown RBP21.11■□□□□ 0.97
MBD3-206ENST00000589901 RIC3Q7Z5B4 369 aa21.11■□□□□ 0.97
MBD3-206ENST00000589901 YDJCA8MPS7 323 aa21.1■□□□□ 0.97
MBD3-206ENST00000589901 IRS4O14654 1257 aaPredicted RBP21.1■□□□□ 0.97
MBD3-206ENST00000589901 C8orf58Q8NAV2 365 aa21.1■□□□□ 0.97
MBD3-206ENST00000589901 DUOX1Q9NRD9 1551 aa21.1■□□□□ 0.97
MBD3-206ENST00000589901 DDX60Q8IY21 1712 aaKnown RBP21.09■□□□□ 0.97
MBD3-206ENST00000589901 TAF1P21675 1872 aa21.09■□□□□ 0.97
MBD3-206ENST00000589901 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
MBD3-206ENST00000589901 GOLGA2Q08379 1002 aa21.09■□□□□ 0.97
MBD3-206ENST00000589901 CST9Q5W186 159 aa21.09■□□□□ 0.97
MBD3-206ENST00000589901 NSFL1CQ9UNZ2 370 aaKnown RBP21.09■□□□□ 0.97
MBD3-206ENST00000589901 COL4A1P02462 1669 aa21.09■□□□□ 0.97
MBD3-206ENST00000589901 WDR33Q9C0J8 1336 aaKnown RBP21.08■□□□□ 0.97
MBD3-206ENST00000589901 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
MBD3-206ENST00000589901 TNIP1Q15025 636 aa21.08■□□□□ 0.97
MBD3-206ENST00000589901 AIDAQ96BJ3 306 aa21.08■□□□□ 0.97
MBD3-206ENST00000589901 MYD88Q99836 296 aa21.08■□□□□ 0.97
MBD3-206ENST00000589901 BCL2L13Q9BXK5 485 aa21.08■□□□□ 0.97
MBD3-206ENST00000589901 WBP1LQ9NX94 342 aa21.08■□□□□ 0.97
MBD3-206ENST00000589901 SHTN1A0MZ66 631 aa21.07■□□□□ 0.96
MBD3-206ENST00000589901 GPSM2P81274 684 aa21.07■□□□□ 0.96
MBD3-206ENST00000589901 WASHC4Q2M389 1173 aa21.07■□□□□ 0.96
MBD3-206ENST00000589901 POLLQ9UGP5 575 aa21.07■□□□□ 0.96
MBD3-206ENST00000589901 RIMBP2O15034 1052 aa21.06■□□□□ 0.96
MBD3-206ENST00000589901 HIRAP54198 1017 aaPredicted RBP21.06■□□□□ 0.96
MBD3-206ENST00000589901 CCDC184Q52MB2 194 aa21.06■□□□□ 0.96
MBD3-206ENST00000589901 ZBTB38Q8NAP3 1195 aaPredicted RBP21.06■□□□□ 0.96
MBD3-206ENST00000589901 LRRC37AA6NMS7 1700 aa21.06■□□□□ 0.96
MBD3-206ENST00000589901 CDHR2Q9BYE9 1310 aa21.05■□□□□ 0.96
MBD3-206ENST00000589901 C6orf229H3BNL8 230 aa21.05■□□□□ 0.96
MBD3-206ENST00000589901 CTCFP49711 727 aaPredicted RBP21.05■□□□□ 0.96
MBD3-206ENST00000589901 RPS8P62241 208 aaKnown RBP21.05■□□□□ 0.96
MBD3-206ENST00000589901 TSPYL6Q8N831 410 aa21.05■□□□□ 0.96
MBD3-206ENST00000589901 TRPM4Q8TD43 1214 aa21.05■□□□□ 0.96
MBD3-206ENST00000589901 JARID2Q92833 1246 aaPredicted RBP21.05■□□□□ 0.96
MBD3-206ENST00000589901 GLIS2Q9BZE0 524 aaPredicted RBP21.05■□□□□ 0.96
MBD3-206ENST00000589901 DBNDD1Q9H9R9 158 aa21.05■□□□□ 0.96
MBD3-206ENST00000589901 SEC31BQ9NQW1 1179 aa21.05■□□□□ 0.96
MBD3-206ENST00000589901 PGAP2Q9UHJ9 254 aa21.05■□□□□ 0.96
MBD3-206ENST00000589901 CNOT7Q9UIV1 285 aaKnown RBP21.05■□□□□ 0.96
MBD3-206ENST00000589901 ZBTB12Q9Y330 459 aaPredicted RBP21.05■□□□□ 0.96
MBD3-206ENST00000589901 PAXIP1Q6ZW49 1069 aaPredicted RBP21.04■□□□□ 0.96
MBD3-206ENST00000589901 GPR101Q96P66 508 aaPredicted RBP21.04■□□□□ 0.96
MBD3-206ENST00000589901 PRDM10Q9NQV6 1147 aa21.04■□□□□ 0.96
MBD3-206ENST00000589901 PSMD14O00487 310 aa21.03■□□□□ 0.96
MBD3-206ENST00000589901 GRM1Q13255 1194 aa21.03■□□□□ 0.96
MBD3-206ENST00000589901 CYP4F22Q6NT55 531 aa21.03■□□□□ 0.96
MBD3-206ENST00000589901 MICALL2Q8IY33 904 aa21.03■□□□□ 0.96
MBD3-206ENST00000589901 CAPNS2Q96L46 248 aa21.03■□□□□ 0.96
MBD3-206ENST00000589901 KCNQ5Q9NR82 932 aa21.03■□□□□ 0.96
MBD3-206ENST00000589901 TLL2Q9Y6L7 1015 aa21.03■□□□□ 0.96
MBD3-206ENST00000589901 CELF2O95319 508 aaKnown RBP21.02■□□□□ 0.96
MBD3-206ENST00000589901 PCCAP05165 728 aaPredicted RBP21.02■□□□□ 0.96
MBD3-206ENST00000589901 LBX1P52954 281 aa21.02■□□□□ 0.96
MBD3-206ENST00000589901 DOK7Q18PE1 504 aa21.02■□□□□ 0.96
MBD3-206ENST00000589901 CCDC30Q5VVM6 783 aa21.02■□□□□ 0.96
MBD3-206ENST00000589901 CCDC191Q8NCU4 936 aa21.02■□□□□ 0.96
MBD3-206ENST00000589901 TBC1D16Q8TBP0 767 aa21.02■□□□□ 0.96
MBD3-206ENST00000589901 TSR2Q969E8 191 aaKnown RBP21.02■□□□□ 0.96
MBD3-206ENST00000589901 METTL22Q9BUU2 404 aaPredicted RBP21.02■□□□□ 0.96
MBD3-206ENST00000589901 H7C1D1 291 aa21.01■□□□□ 0.95
MBD3-206ENST00000589901 ECE2O60344 883 aa21.01■□□□□ 0.95
MBD3-206ENST00000589901 MAP2K1Q02750 393 aaPredicted RBP21.01■□□□□ 0.95
MBD3-206ENST00000589901 ZC3H15Q8WU90 426 aaKnown RBP21.01■□□□□ 0.95
MBD3-206ENST00000589901 CCDC85AQ96PX6 553 aaPredicted RBP21.01■□□□□ 0.95
MBD3-206ENST00000589901 CWC25Q9NXE8 425 aaPredicted RBP21.01■□□□□ 0.95
MBD3-206ENST00000589901 ECE1P42892 770 aa21■□□□□ 0.95
MBD3-206ENST00000589901 SAMD7Q7Z3H4 446 aa21■□□□□ 0.95
MBD3-206ENST00000589901 DPF2Q92785 391 aa21■□□□□ 0.95
MBD3-206ENST00000589901 EYA3Q99504 573 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms