RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ZMYND10O75800 440 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 PDE6BP35913 854 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 COPS6Q7L5N1 327 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 C2CD5Q86YS7 1000 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 BRCA1P38398 1863 aaKnown RBP13.37□□□□□ -0.27
SDF2-208ENST00000589788 ATP10DQ9P241 1426 aa13.37□□□□□ -0.27
SDF2-208ENST00000589788 KCNA3P22001 575 aa13.37□□□□□ -0.27
SDF2-208ENST00000589788 GTF2E1P29083 439 aaPredicted RBP13.37□□□□□ -0.27
SDF2-208ENST00000589788 DALRD3Q5D0E6 543 aaKnown RBP13.37□□□□□ -0.27
SDF2-208ENST00000589788 GIGYF2Q6Y7W6 1299 aaKnown RBP13.37□□□□□ -0.27
SDF2-208ENST00000589788 HYPKQ9NX55 129 aa13.37□□□□□ -0.27
SDF2-208ENST00000589788 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
SDF2-208ENST00000589788 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
SDF2-208ENST00000589788 GPTP24298 496 aa13.36□□□□□ -0.27
SDF2-208ENST00000589788 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
SDF2-208ENST00000589788 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
SDF2-208ENST00000589788 DLEC1Q9Y238 1755 aa13.35□□□□□ -0.27
SDF2-208ENST00000589788 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
SDF2-208ENST00000589788 TSPYL6Q8N831 410 aa13.35□□□□□ -0.27
SDF2-208ENST00000589788 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
SDF2-208ENST00000589788 ARFGEF1Q9Y6D6 1849 aa13.34□□□□□ -0.27
SDF2-208ENST00000589788 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
SDF2-208ENST00000589788 ANKRD13DQ6ZTN6 518 aa13.34□□□□□ -0.27
SDF2-208ENST00000589788 ZNF34Q8IZ26 560 aa13.34□□□□□ -0.27
SDF2-208ENST00000589788 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
SDF2-208ENST00000589788 ZNF622Q969S3 477 aaKnown RBP eCLIP13.34□□□□□ -0.27
SDF2-208ENST00000589788 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
SDF2-208ENST00000589788 MYH16Q9H6N6 1097 aa13.34□□□□□ -0.27
SDF2-208ENST00000589788 SLC24A3Q9HC58 644 aa13.34□□□□□ -0.27
SDF2-208ENST00000589788 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
SDF2-208ENST00000589788 ARHGAP27Q6ZUM4 889 aa13.33□□□□□ -0.28
SDF2-208ENST00000589788 PPP1R42Q7Z4L9 355 aa13.33□□□□□ -0.28
SDF2-208ENST00000589788 TTLL6Q8N841 843 aa13.33□□□□□ -0.28
SDF2-208ENST00000589788 PLBD2Q8NHP8 589 aa13.33□□□□□ -0.28
SDF2-208ENST00000589788 ANKRD36CQ5JPF3 1778 aa13.33□□□□□ -0.28
SDF2-208ENST00000589788 UBN2Q6ZU65 1347 aa13.32□□□□□ -0.28
SDF2-208ENST00000589788 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
SDF2-208ENST00000589788 TCIRG1Q13488 830 aa13.32□□□□□ -0.28
SDF2-208ENST00000589788 SUSD4Q5VX71 490 aa13.32□□□□□ -0.28
SDF2-208ENST00000589788 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
SDF2-208ENST00000589788 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
SDF2-208ENST00000589788 COL11A2P13942 1736 aaPredicted RBP13.31□□□□□ -0.28
SDF2-208ENST00000589788 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
SDF2-208ENST00000589788 ERFEQ4G0M1 354 aa13.31□□□□□ -0.28
SDF2-208ENST00000589788 RIC3Q7Z5B4 369 aa13.31□□□□□ -0.28
SDF2-208ENST00000589788 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
SDF2-208ENST00000589788 MASTLQ96GX5 879 aa13.31□□□□□ -0.28
SDF2-208ENST00000589788 UTP14AQ9BVJ6 771 aaKnown RBP13.31□□□□□ -0.28
SDF2-208ENST00000589788 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
SDF2-208ENST00000589788 ARFGEF2Q9Y6D5 1785 aa13.3□□□□□ -0.28
SDF2-208ENST00000589788 TCERG1O14776 1098 aaKnown RBP13.3□□□□□ -0.28
SDF2-208ENST00000589788 NTSR2O95665 410 aa13.3□□□□□ -0.28
SDF2-208ENST00000589788 SRGNP10124 158 aa13.3□□□□□ -0.28
SDF2-208ENST00000589788 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
SDF2-208ENST00000589788 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
SDF2-208ENST00000589788 STYK1Q6J9G0 422 aa13.3□□□□□ -0.28
SDF2-208ENST00000589788 CACNA1SQ13698 1873 aa13.29□□□□□ -0.28
SDF2-208ENST00000589788 NPR1P16066 1061 aa13.29□□□□□ -0.28
SDF2-208ENST00000589788 GPIHBP1Q8IV16 184 aa13.29□□□□□ -0.28
SDF2-208ENST00000589788 ZNF521Q96K83 1311 aa13.29□□□□□ -0.28
SDF2-208ENST00000589788 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
SDF2-208ENST00000589788 KLRG2A4D1S0 409 aaPredicted RBP13.28□□□□□ -0.28
SDF2-208ENST00000589788 GPR37O15354 613 aa13.28□□□□□ -0.28
SDF2-208ENST00000589788 NLRP10Q86W26 655 aa13.28□□□□□ -0.28
SDF2-208ENST00000589788 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
SDF2-208ENST00000589788 TRMT112Q9UI30 125 aaKnown RBP13.28□□□□□ -0.28
SDF2-208ENST00000589788 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
SDF2-208ENST00000589788 RIC1Q4ADV7 1423 aa13.28□□□□□ -0.28
SDF2-208ENST00000589788 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
SDF2-208ENST00000589788 TNRC6CQ9HCJ0 1690 aaKnown RBP13.27□□□□□ -0.28
SDF2-208ENST00000589788 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.29
SDF2-208ENST00000589788 VAMP4O75379 141 aa13.27□□□□□ -0.29
SDF2-208ENST00000589788 PRPF40BQ6NWY9 871 aaKnown RBP13.27□□□□□ -0.29
SDF2-208ENST00000589788 SH3TC1Q8TE82 1336 aa13.27□□□□□ -0.29
SDF2-208ENST00000589788 E9PSI1 815 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 C21orf2O43822 256 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
SDF2-208ENST00000589788 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 MYD88Q99836 296 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 ISCA1Q9BUE6 129 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 SLX4Q8IY92 1834 aa13.26□□□□□ -0.29
SDF2-208ENST00000589788 CRY2Q49AN0 593 aa13.25□□□□□ -0.29
SDF2-208ENST00000589788 SLC10A5Q5PT55 438 aa13.25□□□□□ -0.29
SDF2-208ENST00000589788 SOGA3Q5TF21 947 aa13.25□□□□□ -0.29
SDF2-208ENST00000589788 KSR2Q6VAB6 950 aa13.25□□□□□ -0.29
SDF2-208ENST00000589788 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
SDF2-208ENST00000589788 MAP3K2Q9Y2U5 619 aa13.25□□□□□ -0.29
SDF2-208ENST00000589788 PI4KAP2A4QPH2 592 aa13.24□□□□□ -0.29
SDF2-208ENST00000589788 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
SDF2-208ENST00000589788 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
SDF2-208ENST00000589788 TRIM28Q13263 835 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms