RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
DNMT1-221ENST00000589538 H7C1W4 665 aa20.86■□□□□ 0.93
DNMT1-221ENST00000589538 SSH1Q8WYL5 1049 aa20.86■□□□□ 0.93
DNMT1-221ENST00000589538 TIAM2Q8IVF5 1701 aa20.86■□□□□ 0.93
DNMT1-221ENST00000589538 KDM2BQ8NHM5 1336 aa20.85■□□□□ 0.93
DNMT1-221ENST00000589538 MYH3P11055 1940 aa20.85■□□□□ 0.93
DNMT1-221ENST00000589538 F6X3S4 739 aa20.85■□□□□ 0.93
DNMT1-221ENST00000589538 PRELPP51888 382 aa20.85■□□□□ 0.93
DNMT1-221ENST00000589538 SP8Q8IXZ3 490 aa20.85■□□□□ 0.93
DNMT1-221ENST00000589538 ALDH1L1O75891 902 aa20.84■□□□□ 0.93
DNMT1-221ENST00000589538 BEND3Q5T5X7 828 aa20.84■□□□□ 0.93
DNMT1-221ENST00000589538 OLFM4Q6UX06 510 aa20.84■□□□□ 0.93
DNMT1-221ENST00000589538 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
DNMT1-221ENST00000589538 ZNF526Q8TF50 670 aaPredicted RBP20.84■□□□□ 0.93
DNMT1-221ENST00000589538 SMC4Q9NTJ3 1288 aa20.84■□□□□ 0.93
DNMT1-221ENST00000589538 SNED1Q8TER0 1413 aa20.84■□□□□ 0.93
DNMT1-221ENST00000589538 CTSWP56202 376 aa20.83■□□□□ 0.93
DNMT1-221ENST00000589538 SUPT20HQ8NEM7 779 aa20.83■□□□□ 0.93
DNMT1-221ENST00000589538 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
DNMT1-221ENST00000589538 IARSP41252 1262 aaKnown RBP20.82■□□□□ 0.92
DNMT1-221ENST00000589538 BRPF1P55201 1214 aaPredicted RBP20.82■□□□□ 0.92
DNMT1-221ENST00000589538 SLC4A10Q6U841 1118 aa20.82■□□□□ 0.92
DNMT1-221ENST00000589538 JARID2Q92833 1246 aaPredicted RBP20.82■□□□□ 0.92
DNMT1-221ENST00000589538 PLA2G12BQ9BX93 195 aa20.82■□□□□ 0.92
DNMT1-221ENST00000589538 SRCIN1Q9C0H9 1055 aa20.82■□□□□ 0.92
DNMT1-221ENST00000589538 VPS33BQ9H267 617 aa20.82■□□□□ 0.92
DNMT1-221ENST00000589538 ZNF277Q9NRM2 450 aaPredicted RBP20.82■□□□□ 0.92
DNMT1-221ENST00000589538 RPS8P62241 208 aaKnown RBP20.81■□□□□ 0.92
DNMT1-221ENST00000589538 DPY19L2Q6NUT2 758 aa20.81■□□□□ 0.92
DNMT1-221ENST00000589538 TAF1P21675 1872 aa20.81■□□□□ 0.92
DNMT1-221ENST00000589538 GLTPD2A6NH11 291 aa20.8■□□□□ 0.92
DNMT1-221ENST00000589538 DPP8Q6V1X1 898 aaPredicted RBP20.8■□□□□ 0.92
DNMT1-221ENST00000589538 MPNDQ8N594 471 aa20.8■□□□□ 0.92
DNMT1-221ENST00000589538 CDC5LQ99459 802 aaKnown RBP20.8■□□□□ 0.92
DNMT1-221ENST00000589538 BCL2L13Q9BXK5 485 aa20.8■□□□□ 0.92
DNMT1-221ENST00000589538 LRRC37AA6NMS7 1700 aa20.8■□□□□ 0.92
DNMT1-221ENST00000589538 RTL9Q8NET4 1388 aa20.8■□□□□ 0.92
DNMT1-221ENST00000589538 CASP7P55210 303 aa20.79■□□□□ 0.92
DNMT1-221ENST00000589538 TTLL11Q8NHH1 800 aa20.79■□□□□ 0.92
DNMT1-221ENST00000589538 JDP2Q8WYK2 163 aa20.79■□□□□ 0.92
DNMT1-221ENST00000589538 CELF1Q92879 486 aaKnown RBP20.79■□□□□ 0.92
DNMT1-221ENST00000589538 RTFDC1Q9BY42 306 aaPredicted RBP20.79■□□□□ 0.92
DNMT1-221ENST00000589538 GRM8O00222 908 aa20.78■□□□□ 0.92
DNMT1-221ENST00000589538 RARSP54136 660 aaKnown RBP20.78■□□□□ 0.92
DNMT1-221ENST00000589538 ANKRD18AQ8IVF6 992 aa20.78■□□□□ 0.92
DNMT1-221ENST00000589538 C9orf78Q9NZ63 289 aaPredicted RBP20.78■□□□□ 0.92
DNMT1-221ENST00000589538 KIF16BQ96L93 1317 aa20.77■□□□□ 0.91
DNMT1-221ENST00000589538 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
DNMT1-221ENST00000589538 SEC31BQ9NQW1 1179 aa20.76■□□□□ 0.91
DNMT1-221ENST00000589538 CSF1RP07333 972 aa20.75■□□□□ 0.91
DNMT1-221ENST00000589538 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
DNMT1-221ENST00000589538 CCDC85AQ96PX6 553 aaPredicted RBP20.75■□□□□ 0.91
DNMT1-221ENST00000589538 FZD9O00144 591 aa20.74■□□□□ 0.91
DNMT1-221ENST00000589538 KIF3CO14782 793 aa20.74■□□□□ 0.91
DNMT1-221ENST00000589538 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
DNMT1-221ENST00000589538 ARHGAP45Q92619 1136 aa20.74■□□□□ 0.91
DNMT1-221ENST00000589538 GREM2Q9H772 168 aa20.74■□□□□ 0.91
DNMT1-221ENST00000589538 IGHMBP2P38935 993 aaKnown RBP20.73■□□□□ 0.91
DNMT1-221ENST00000589538 NIM1KQ8IY84 436 aa20.73■□□□□ 0.91
DNMT1-221ENST00000589538 NMRK2Q9NPI5 230 aa20.73■□□□□ 0.91
DNMT1-221ENST00000589538 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
DNMT1-221ENST00000589538 NSFL1CQ9UNZ2 370 aaKnown RBP20.73■□□□□ 0.91
DNMT1-221ENST00000589538 UTYO14607 1347 aa20.73■□□□□ 0.91
DNMT1-221ENST00000589538 WDR90Q96KV7 1748 aa20.73■□□□□ 0.91
DNMT1-221ENST00000589538 IPO8O15397 1037 aaKnown RBP20.72■□□□□ 0.91
DNMT1-221ENST00000589538 VEGFAP15692 232 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-221ENST00000589538 ITGA6P23229 1130 aa20.72■□□□□ 0.91
DNMT1-221ENST00000589538 CCT4P50991 539 aaKnown RBP20.72■□□□□ 0.91
DNMT1-221ENST00000589538 EIF6P56537 245 aaKnown RBP20.72■□□□□ 0.91
DNMT1-221ENST00000589538 KIAA2012Q0VF49 1180 aa20.72■□□□□ 0.91
DNMT1-221ENST00000589538 C16orf71Q8IYS4 520 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-221ENST00000589538 EYA3Q99504 573 aa20.72■□□□□ 0.91
DNMT1-221ENST00000589538 BSDC1Q9NW68 430 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-221ENST00000589538 PODXL2Q9NZ53 605 aa20.72■□□□□ 0.91
DNMT1-221ENST00000589538 C1QTNF8P60827 252 aa20.71■□□□□ 0.91
DNMT1-221ENST00000589538 FOXO4P98177 505 aa20.71■□□□□ 0.91
DNMT1-221ENST00000589538 AOC3Q16853 763 aa20.71■□□□□ 0.91
DNMT1-221ENST00000589538 SLC51AQ86UW1 340 aa20.71■□□□□ 0.91
DNMT1-221ENST00000589538 RRAGCQ9HB90 399 aa20.71■□□□□ 0.91
DNMT1-221ENST00000589538 ANKIB1Q9P2G1 1089 aa20.71■□□□□ 0.91
DNMT1-221ENST00000589538 COL4A1P02462 1669 aa20.7■□□□□ 0.91
DNMT1-221ENST00000589538 ANKRD18BA2A2Z9 1011 aa20.7■□□□□ 0.9
DNMT1-221ENST00000589538 C6orf229H3BNL8 230 aa20.7■□□□□ 0.9
DNMT1-221ENST00000589538 GPSM2P81274 684 aa20.7■□□□□ 0.9
DNMT1-221ENST00000589538 FAM161AQ3B820 660 aa20.7■□□□□ 0.9
DNMT1-221ENST00000589538 MPHOSPH8Q99549 860 aa20.7■□□□□ 0.9
DNMT1-221ENST00000589538 LTBP1Q14766 1721 aa20.7■□□□□ 0.9
DNMT1-221ENST00000589538 DUOX1Q9NRD9 1551 aa20.69■□□□□ 0.9
DNMT1-221ENST00000589538 TOMM70O94826 608 aa20.69■□□□□ 0.9
DNMT1-221ENST00000589538 DDNO94850 711 aaPredicted RBP20.69■□□□□ 0.9
DNMT1-221ENST00000589538 IFIT5Q13325 482 aaKnown RBP20.69■□□□□ 0.9
DNMT1-221ENST00000589538 WASHC4Q2M389 1173 aa20.69■□□□□ 0.9
DNMT1-221ENST00000589538 GPC2Q8N158 579 aa20.69■□□□□ 0.9
DNMT1-221ENST00000589538 GGA1Q9UJY5 639 aa20.69■□□□□ 0.9
DNMT1-221ENST00000589538 XDHP47989 1333 aa20.69■□□□□ 0.9
DNMT1-221ENST00000589538 IQCA1LA6NCM1 817 aa20.68■□□□□ 0.9
DNMT1-221ENST00000589538 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
DNMT1-221ENST00000589538 L3MBTL3Q96JM7 780 aaPredicted RBP20.68■□□□□ 0.9
DNMT1-221ENST00000589538 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
DNMT1-221ENST00000589538 HDAC5Q9UQL6 1122 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms