RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 RNF112Q9ULX5 631 aa7.05□□□□□ -1.28
SMAD4-207ENST00000589076 MAFBQ9Y5Q3 323 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-207ENST00000589076 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-207ENST00000589076 EIF2AK2P19525 551 aaKnown RBP7.04□□□□□ -1.28
SMAD4-207ENST00000589076 DPYDQ12882 1025 aa7.04□□□□□ -1.28
SMAD4-207ENST00000589076 KLK14Q9P0G3 267 aa7.04□□□□□ -1.28
SMAD4-207ENST00000589076 DMGDHQ9UI17 866 aaKnown RBP7.04□□□□□ -1.28
SMAD4-207ENST00000589076 TIMELESSQ9UNS1 1208 aa7.04□□□□□ -1.28
SMAD4-207ENST00000589076 FOXO3O43524 673 aa7.03□□□□□ -1.28
SMAD4-207ENST00000589076 PTCD1O75127 700 aaKnown RBP7.03□□□□□ -1.28
SMAD4-207ENST00000589076 SASH3O75995 380 aa7.03□□□□□ -1.28
SMAD4-207ENST00000589076 MICAL2O94851 1124 aa7.03□□□□□ -1.28
SMAD4-207ENST00000589076 MLLT1Q03111 559 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-207ENST00000589076 DGKZQ13574 1117 aa7.03□□□□□ -1.28
SMAD4-207ENST00000589076 C11orf91Q3C1V1 193 aa7.03□□□□□ -1.28
SMAD4-207ENST00000589076 SMG9Q9H0W8 520 aaKnown RBP7.03□□□□□ -1.28
SMAD4-207ENST00000589076 AKTIPQ9H8T0 292 aa7.03□□□□□ -1.28
SMAD4-207ENST00000589076 VRTNQ9H8Y1 702 aa7.03□□□□□ -1.28
SMAD4-207ENST00000589076 SRA1Q9HD15 236 aaKnown RBP7.03□□□□□ -1.28
SMAD4-207ENST00000589076 BCS1LQ9Y276 419 aa7.03□□□□□ -1.28
SMAD4-207ENST00000589076 GHRHP01286 108 aa7.02□□□□□ -1.29
SMAD4-207ENST00000589076 PSAPP07602 524 aa7.02□□□□□ -1.29
SMAD4-207ENST00000589076 TARSP26639 723 aaKnown RBP7.02□□□□□ -1.29
SMAD4-207ENST00000589076 NOS3P29474 1203 aa7.02□□□□□ -1.29
SMAD4-207ENST00000589076 NRLP54845 237 aa7.02□□□□□ -1.29
SMAD4-207ENST00000589076 PRR23CQ6ZRP0 262 aa7.02□□□□□ -1.29
SMAD4-207ENST00000589076 ANKMY2Q8IV38 441 aa7.02□□□□□ -1.29
SMAD4-207ENST00000589076 MAP4K3Q8IVH8 894 aa7.02□□□□□ -1.29
SMAD4-207ENST00000589076 CALR3Q96L12 384 aaKnown RBP7.02□□□□□ -1.29
SMAD4-207ENST00000589076 MRPL18Q9H0U6 180 aaKnown RBP7.02□□□□□ -1.29
SMAD4-207ENST00000589076 PCMTD2Q9NV79 361 aa7.02□□□□□ -1.29
SMAD4-207ENST00000589076 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 FAM196BA6NMK8 535 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 PLAURQ03405 335 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 PTK7Q13308 1070 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 GRIK5Q16478 980 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 ILDR2Q71H61 639 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 C14orf37Q86TY3 774 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 PROSER2Q86WR7 435 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-207ENST00000589076 IFT43Q96FT9 208 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 ZFATQ9P243 1243 aa7.01□□□□□ -1.29
SMAD4-207ENST00000589076 ZBTB42B2RXF5 422 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L15C9J2P7 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L10C9JJH3 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L13C9JLJ4 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L12C9JPN9 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L11C9JVI0 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L21D6R901 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L18D6R9N7 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L22D6RA61 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L17D6RBQ6 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L19D6RCP7 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L20D6RJB6 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 USP17L24Q0WX57 530 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 CRTC2Q53ET0 693 aaPredicted RBP7□□□□□ -1.29
SMAD4-207ENST00000589076 HFE2Q6ZVN8 426 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 CACTIN-AS1Q8N1I8 211 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 PPP1R12CQ9BZL4 782 aa7□□□□□ -1.29
SMAD4-207ENST00000589076 TLR7Q9NYK1 1049 aaKnown RBP7□□□□□ -1.29
SMAD4-207ENST00000589076 GSC2O15499 205 aa6.99□□□□□ -1.29
SMAD4-207ENST00000589076 XYLBO75191 536 aa6.99□□□□□ -1.29
SMAD4-207ENST00000589076 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-207ENST00000589076 MUC3BQ9H195 1237 aa6.99□□□□□ -1.29
SMAD4-207ENST00000589076 RTCBQ9Y3I0 505 aaKnown RBP6.99□□□□□ -1.29
SMAD4-207ENST00000589076 LOC102724428A0A0B4J2F2 783 aa6.98□□□□□ -1.29
SMAD4-207ENST00000589076 LGR5O75473 907 aa6.98□□□□□ -1.29
SMAD4-207ENST00000589076 SIK1P57059 783 aa6.98□□□□□ -1.29
SMAD4-207ENST00000589076 CMTR1Q8N1G2 835 aaKnown RBP6.98□□□□□ -1.29
SMAD4-207ENST00000589076 TMEM130Q8N3G9 435 aa6.98□□□□□ -1.29
SMAD4-207ENST00000589076 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
SMAD4-207ENST00000589076 MYO19Q96H55 970 aa6.98□□□□□ -1.29
SMAD4-207ENST00000589076 MEGF10Q96KG7 1140 aa6.98□□□□□ -1.29
SMAD4-207ENST00000589076 DLL1O00548 723 aa6.97□□□□□ -1.29
SMAD4-207ENST00000589076 DEAF1O75398 565 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-207ENST00000589076 EGFRP00533 1210 aa6.97□□□□□ -1.29
SMAD4-207ENST00000589076 FSTP19883 344 aa6.97□□□□□ -1.29
SMAD4-207ENST00000589076 LMOD1P29536 600 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-207ENST00000589076 RGL4Q8IZJ4 473 aa6.97□□□□□ -1.29
SMAD4-207ENST00000589076 IL22RA1Q8N6P7 574 aa6.97□□□□□ -1.29
SMAD4-207ENST00000589076 FAM200AQ8TCP9 573 aa6.97□□□□□ -1.29
SMAD4-207ENST00000589076 QTRT2Q9H974 415 aaKnown RBP6.97□□□□□ -1.29
SMAD4-207ENST00000589076 PAX4O43316 350 aa6.96□□□□□ -1.3
SMAD4-207ENST00000589076 KANK4Q5T7N3 995 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-207ENST00000589076 DZIP1LQ8IYY4 767 aaKnown RBP6.96□□□□□ -1.3
SMAD4-207ENST00000589076 FAM177BA6PVY3 158 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 GLB1P16278 677 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 GRNP28799 593 aaKnown RBP6.95□□□□□ -1.3
SMAD4-207ENST00000589076 WEE1P30291 646 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 SOX18P35713 384 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 TREML1Q86YW5 311 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 KRTAP1-3Q8IUG1 177 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 CLUAP1Q96AJ1 413 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 SPACA7Q96KW9 195 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 NSUN5Q96P11 429 aaKnown RBP6.95□□□□□ -1.3
SMAD4-207ENST00000589076 FAM13BQ9NYF5 915 aa6.95□□□□□ -1.3
SMAD4-207ENST00000589076 BTBD11A6QL63 1104 aa6.94□□□□□ -1.3
SMAD4-207ENST00000589076 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-207ENST00000589076 J3QW42 95 aa6.94□□□□□ -1.3
SMAD4-207ENST00000589076 RFX1P22670 979 aa6.94□□□□□ -1.3
SMAD4-207ENST00000589076 SSTR4P31391 388 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms