RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 RPGRQ92834 1020 aaKnown RBP22.25■■□□□ 1.15
DNMT1-215ENST00000588913 CCDC85AQ96PX6 553 aaPredicted RBP22.24■■□□□ 1.15
DNMT1-215ENST00000588913 PTPRCP08575 1304 aa22.24■■□□□ 1.15
DNMT1-215ENST00000588913 CDHR2Q9BYE9 1310 aa22.24■■□□□ 1.15
DNMT1-215ENST00000588913 BRPF1P55201 1214 aaPredicted RBP22.23■■□□□ 1.15
DNMT1-215ENST00000588913 SF3B3Q15393 1217 aaKnown RBP22.23■■□□□ 1.15
DNMT1-215ENST00000588913 CRAMP1Q96RY5 1269 aa22.22■■□□□ 1.15
DNMT1-215ENST00000588913 CELF1Q92879 486 aaKnown RBP22.22■■□□□ 1.15
DNMT1-215ENST00000588913 SEC31BQ9NQW1 1179 aa22.22■■□□□ 1.15
DNMT1-215ENST00000588913 RBM17Q96I25 401 aaKnown RBP22.21■■□□□ 1.15
DNMT1-215ENST00000588913 SPEF2Q9C093 1822 aa22.2■■□□□ 1.14
DNMT1-215ENST00000588913 LRRC37AA6NMS7 1700 aa22.2■■□□□ 1.14
DNMT1-215ENST00000588913 PDE8AO60658 829 aa22.2■■□□□ 1.14
DNMT1-215ENST00000588913 YY1P25490 414 aa22.2■■□□□ 1.14
DNMT1-215ENST00000588913 ALDH1B1P30837 517 aa22.2■■□□□ 1.14
DNMT1-215ENST00000588913 EPHA10Q5JZY3 1008 aa22.2■■□□□ 1.14
DNMT1-215ENST00000588913 SRCIN1Q9C0H9 1055 aa22.19■■□□□ 1.14
DNMT1-215ENST00000588913 PPEF1O14829 653 aaPredicted RBP22.18■■□□□ 1.14
DNMT1-215ENST00000588913 NBPF7P0C2Y1 421 aaPredicted RBP22.17■■□□□ 1.14
DNMT1-215ENST00000588913 CTSWP56202 376 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 TTLL11Q8NHH1 800 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 KAZALD1Q96I82 304 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 GRM8O00222 908 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 ALDH1L1O75891 902 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 GRAPQ13588 217 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 DDX46Q7L014 1031 aaKnown RBP22.17■■□□□ 1.14
DNMT1-215ENST00000588913 GRAPLQ8TC17 118 aaPredicted RBP22.17■■□□□ 1.14
DNMT1-215ENST00000588913 GREM2Q9H772 168 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 COL4A5P29400 1685 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 TIAM2Q8IVF5 1701 aa22.17■■□□□ 1.14
DNMT1-215ENST00000588913 DUOX1Q9NRD9 1551 aa22.16■■□□□ 1.14
DNMT1-215ENST00000588913 FOXO4P98177 505 aa22.16■■□□□ 1.14
DNMT1-215ENST00000588913 C9orf131Q5VYM1 1079 aa22.16■■□□□ 1.14
DNMT1-215ENST00000588913 TRIM27P14373 513 aa22.15■■□□□ 1.14
DNMT1-215ENST00000588913 PLA2G12BQ9BX93 195 aa22.15■■□□□ 1.14
DNMT1-215ENST00000588913 LTBP1Q14766 1721 aa22.15■■□□□ 1.14
DNMT1-215ENST00000588913 DICER1Q9UPY3 1922 aaKnown RBP22.15■■□□□ 1.14
DNMT1-215ENST00000588913 CCDC93Q567U6 631 aa22.15■■□□□ 1.14
DNMT1-215ENST00000588913 FRAT1Q92837 279 aaPredicted RBP22.15■■□□□ 1.14
DNMT1-215ENST00000588913 SUCLG2Q96I99 432 aa22.15■■□□□ 1.14
DNMT1-215ENST00000588913 USP44Q9H0E7 712 aa22.14■■□□□ 1.13
DNMT1-215ENST00000588913 ATP6V0A2Q9Y487 856 aa22.14■■□□□ 1.13
DNMT1-215ENST00000588913 UTYO14607 1347 aa22.13■■□□□ 1.13
DNMT1-215ENST00000588913 KIF16BQ96L93 1317 aa22.13■■□□□ 1.13
DNMT1-215ENST00000588913 FAM161AQ3B820 660 aa22.13■■□□□ 1.13
DNMT1-215ENST00000588913 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
DNMT1-215ENST00000588913 RNF181Q9P0P0 153 aa22.13■■□□□ 1.13
DNMT1-215ENST00000588913 CSF1RP07333 972 aa22.12■■□□□ 1.13
DNMT1-215ENST00000588913 CCDC152Q4G0S7 254 aa22.12■■□□□ 1.13
DNMT1-215ENST00000588913 CLUAP1Q96AJ1 413 aa22.12■■□□□ 1.13
DNMT1-215ENST00000588913 API5Q9BZZ5 524 aaKnown RBP22.12■■□□□ 1.13
DNMT1-215ENST00000588913 TAOK3Q9H2K8 898 aa22.12■■□□□ 1.13
DNMT1-215ENST00000588913 ZNF277Q9NRM2 450 aaPredicted RBP22.12■■□□□ 1.13
DNMT1-215ENST00000588913 C9orf78Q9NZ63 289 aaPredicted RBP22.12■■□□□ 1.13
DNMT1-215ENST00000588913 LTBP3Q9NS15 1303 aa22.11■■□□□ 1.13
DNMT1-215ENST00000588913 BBOX1O75936 387 aa22.11■■□□□ 1.13
DNMT1-215ENST00000588913 ARHGAP45Q92619 1136 aa22.11■■□□□ 1.13
DNMT1-215ENST00000588913 FKBP4Q02790 459 aaKnown RBP eCLIP22.1■■□□□ 1.13
DNMT1-215ENST00000588913 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
DNMT1-215ENST00000588913 SP8Q8IXZ3 490 aa22.1■■□□□ 1.13
DNMT1-215ENST00000588913 RTL9Q8NET4 1388 aa22.1■■□□□ 1.13
DNMT1-215ENST00000588913 RLBP1P12271 317 aa22.1■■□□□ 1.13
DNMT1-215ENST00000588913 LMNB1P20700 586 aa22.1■■□□□ 1.13
DNMT1-215ENST00000588913 RPS8P62241 208 aaKnown RBP22.1■■□□□ 1.13
DNMT1-215ENST00000588913 ZNF784Q8NCA9 323 aaPredicted RBP22.1■■□□□ 1.13
DNMT1-215ENST00000588913 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
DNMT1-215ENST00000588913 WTIPA6NIX2 430 aaPredicted RBP22.09■■□□□ 1.13
DNMT1-215ENST00000588913 SOGA3Q5TF21 947 aa22.09■■□□□ 1.13
DNMT1-215ENST00000588913 A0A1B0GUL6 1792 aa22.08■■□□□ 1.13
DNMT1-215ENST00000588913 LMBR1LQ6UX01 489 aa22.08■■□□□ 1.13
DNMT1-215ENST00000588913 ANKRD44Q8N8A2 993 aa22.08■■□□□ 1.13
DNMT1-215ENST00000588913 INTS3Q68E01 1043 aaKnown RBP22.07■■□□□ 1.12
DNMT1-215ENST00000588913 RTKN2Q8IZC4 609 aa22.07■■□□□ 1.12
DNMT1-215ENST00000588913 MEIS3Q99687 375 aa22.07■■□□□ 1.12
DNMT1-215ENST00000588913 HSP90B1P14625 803 aaKnown RBP22.07■■□□□ 1.12
DNMT1-215ENST00000588913 ITGA6P23229 1130 aa22.07■■□□□ 1.12
DNMT1-215ENST00000588913 CCT4P50991 539 aaKnown RBP22.07■■□□□ 1.12
DNMT1-215ENST00000588913 GPSM2P81274 684 aa22.07■■□□□ 1.12
DNMT1-215ENST00000588913 GPR101Q96P66 508 aaPredicted RBP22.07■■□□□ 1.12
DNMT1-215ENST00000588913 BICC1Q9H694 974 aaKnown RBP22.07■■□□□ 1.12
DNMT1-215ENST00000588913 ZKSCAN2Q63HK3 967 aa22.06■■□□□ 1.12
DNMT1-215ENST00000588913 TMEM57Q8N5G2 664 aa22.06■■□□□ 1.12
DNMT1-215ENST00000588913 ZNF526Q8TF50 670 aaPredicted RBP22.06■■□□□ 1.12
DNMT1-215ENST00000588913 ZNF594Q96JF6 807 aaPredicted RBP22.06■■□□□ 1.12
DNMT1-215ENST00000588913 PSMD1Q99460 953 aa22.06■■□□□ 1.12
DNMT1-215ENST00000588913 CC2D2BQ6DHV5 1058 aa22.05■■□□□ 1.12
DNMT1-215ENST00000588913 PLIN1O60240 522 aa22.04■■□□□ 1.12
DNMT1-215ENST00000588913 IARSP41252 1262 aaKnown RBP22.04■■□□□ 1.12
DNMT1-215ENST00000588913 ANKRD18AQ8IVF6 992 aa22.04■■□□□ 1.12
DNMT1-215ENST00000588913 RTFDC1Q9BY42 306 aaPredicted RBP22.04■■□□□ 1.12
DNMT1-215ENST00000588913 POLLQ9UGP5 575 aa22.04■■□□□ 1.12
DNMT1-215ENST00000588913 RCAN3Q9UKA8 241 aa22.04■■□□□ 1.12
DNMT1-215ENST00000588913 CHMP3Q9Y3E7 222 aa22.04■■□□□ 1.12
DNMT1-215ENST00000588913 IPO8O15397 1037 aaKnown RBP22.03■■□□□ 1.12
DNMT1-215ENST00000588913 RABL6Q3YEC7 729 aaPredicted RBP22.03■■□□□ 1.12
DNMT1-215ENST00000588913 MPNDQ8N594 471 aa22.03■■□□□ 1.12
DNMT1-215ENST00000588913 DPP8Q6V1X1 898 aaPredicted RBP22.02■■□□□ 1.12
DNMT1-215ENST00000588913 NSFL1CQ9UNZ2 370 aaKnown RBP22.02■■□□□ 1.12
DNMT1-215ENST00000588913 AOC3Q16853 763 aa22.02■■□□□ 1.11
DNMT1-215ENST00000588913 PANK1Q8TE04 598 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms