RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ATP8B2P98198 1209 aa21.15■□□□□ 0.98
SCAMP4-211ENST00000588907 CRY2Q49AN0 593 aa21.15■□□□□ 0.98
SCAMP4-211ENST00000588907 LMBR1LQ6UX01 489 aa21.15■□□□□ 0.98
SCAMP4-211ENST00000588907 ANKRD31Q8N7Z5 1873 aa21.14■□□□□ 0.97
SCAMP4-211ENST00000588907 SRGAP3O43295 1099 aa21.14■□□□□ 0.97
SCAMP4-211ENST00000588907 IFIT5Q13325 482 aaKnown RBP21.14■□□□□ 0.97
SCAMP4-211ENST00000588907 CCDC57Q2TAC2 916 aa21.14■□□□□ 0.97
SCAMP4-211ENST00000588907 TNRC6CQ9HCJ0 1690 aaKnown RBP21.14■□□□□ 0.97
SCAMP4-211ENST00000588907 EPHA10Q5JZY3 1008 aa21.13■□□□□ 0.97
SCAMP4-211ENST00000588907 RPGRQ92834 1020 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-211ENST00000588907 CDC5LQ99459 802 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-211ENST00000588907 CHMP3Q9Y3E7 222 aa21.13■□□□□ 0.97
SCAMP4-211ENST00000588907 CD2APQ9Y5K6 639 aa21.13■□□□□ 0.97
SCAMP4-211ENST00000588907 DDX46Q7L014 1031 aaKnown RBP21.12■□□□□ 0.97
SCAMP4-211ENST00000588907 SSH3Q8TE77 659 aa21.12■□□□□ 0.97
SCAMP4-211ENST00000588907 ANKRD18BA2A2Z9 1011 aa21.11■□□□□ 0.97
SCAMP4-211ENST00000588907 H0YIN7 160 aa21.11■□□□□ 0.97
SCAMP4-211ENST00000588907 TGFB2P61812 414 aa21.11■□□□□ 0.97
SCAMP4-211ENST00000588907 HDAC1Q13547 482 aaPredicted RBP21.11■□□□□ 0.97
SCAMP4-211ENST00000588907 FAM161AQ3B820 660 aa21.11■□□□□ 0.97
SCAMP4-211ENST00000588907 RBM17Q96I25 401 aaKnown RBP21.11■□□□□ 0.97
SCAMP4-211ENST00000588907 RWDD1Q9H446 243 aaPredicted RBP21.11■□□□□ 0.97
SCAMP4-211ENST00000588907 PCDHB15Q9Y5E8 787 aa21.11■□□□□ 0.97
SCAMP4-211ENST00000588907 NPR1P16066 1061 aa21.1■□□□□ 0.97
SCAMP4-211ENST00000588907 ITGA6P23229 1130 aa21.1■□□□□ 0.97
SCAMP4-211ENST00000588907 HOXA10P31260 410 aaPredicted RBP21.1■□□□□ 0.97
SCAMP4-211ENST00000588907 POLA2Q14181 598 aa21.1■□□□□ 0.97
SCAMP4-211ENST00000588907 TAF7LQ5H9L4 462 aa21.1■□□□□ 0.97
SCAMP4-211ENST00000588907 CCDC24Q8N4L8 307 aa21.1■□□□□ 0.97
SCAMP4-211ENST00000588907 GREM2Q9H772 168 aa21.1■□□□□ 0.97
SCAMP4-211ENST00000588907 FBXO3Q9UK99 471 aa21.1■□□□□ 0.97
SCAMP4-211ENST00000588907 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
SCAMP4-211ENST00000588907 PPP4R2Q9NY27 417 aa21.09■□□□□ 0.97
SCAMP4-211ENST00000588907 SRGNP10124 158 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 ALDH1B1P30837 517 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 HSP90AB4PQ58FF6 505 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 STYK1Q6J9G0 422 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 C3orf67Q6ZVT6 689 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 TMC4Q7Z404 712 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 C2CD5Q86YS7 1000 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 CRAMP1Q96RY5 1269 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 COPRSQ9NQ92 184 aa21.08■□□□□ 0.97
SCAMP4-211ENST00000588907 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.96
SCAMP4-211ENST00000588907 LRP5O75197 1615 aa21.07■□□□□ 0.96
SCAMP4-211ENST00000588907 PNMA6EA0A0J9YXQ4 647 aa21.07■□□□□ 0.96
SCAMP4-211ENST00000588907 IGHMBP2P38935 993 aaKnown RBP21.07■□□□□ 0.96
SCAMP4-211ENST00000588907 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
SCAMP4-211ENST00000588907 ANKRD18AQ8IVF6 992 aa21.06■□□□□ 0.96
SCAMP4-211ENST00000588907 SIRT2Q8IXJ6 389 aa21.06■□□□□ 0.96
SCAMP4-211ENST00000588907 CNKSR1Q969H4 720 aa21.06■□□□□ 0.96
SCAMP4-211ENST00000588907 PPP1R1BQ9UD71 204 aaPredicted RBP21.06■□□□□ 0.96
SCAMP4-211ENST00000588907 BBOX1O75936 387 aa21.05■□□□□ 0.96
SCAMP4-211ENST00000588907 RFX5P48382 616 aaPredicted RBP21.05■□□□□ 0.96
SCAMP4-211ENST00000588907 GRAPQ13588 217 aa21.05■□□□□ 0.96
SCAMP4-211ENST00000588907 GRAPLQ8TC17 118 aaPredicted RBP21.05■□□□□ 0.96
SCAMP4-211ENST00000588907 GCC1Q96CN9 775 aa21.05■□□□□ 0.96
SCAMP4-211ENST00000588907 CCDC136Q96JN2 1154 aa21.05■□□□□ 0.96
SCAMP4-211ENST00000588907 CCDC85AQ96PX6 553 aaPredicted RBP21.05■□□□□ 0.96
SCAMP4-211ENST00000588907 MPHOSPH8Q99549 860 aa21.05■□□□□ 0.96
SCAMP4-211ENST00000588907 CIAO1O76071 339 aa21.04■□□□□ 0.96
SCAMP4-211ENST00000588907 PTPN12Q05209 780 aaKnown RBP21.04■□□□□ 0.96
SCAMP4-211ENST00000588907 ERC1Q8IUD2 1116 aa21.04■□□□□ 0.96
SCAMP4-211ENST00000588907 NOP58Q9Y2X3 529 aaKnown RBP21.04■□□□□ 0.96
SCAMP4-211ENST00000588907 RPS8P62241 208 aaKnown RBP21.03■□□□□ 0.96
SCAMP4-211ENST00000588907 RAB11FIP3O75154 756 aa21.02■□□□□ 0.96
SCAMP4-211ENST00000588907 SURF6O75683 361 aaKnown RBP21.02■□□□□ 0.96
SCAMP4-211ENST00000588907 G3BP1Q13283 466 aaKnown RBP eCLIP21.02■□□□□ 0.96
SCAMP4-211ENST00000588907 LDHAL6AQ6ZMR3 332 aa21.02■□□□□ 0.96
SCAMP4-211ENST00000588907 TMX4Q9H1E5 349 aaPredicted RBP21.02■□□□□ 0.96
SCAMP4-211ENST00000588907 DCTPP1Q9H773 170 aa21.02■□□□□ 0.96
SCAMP4-211ENST00000588907 SEC31BQ9NQW1 1179 aa21.02■□□□□ 0.96
SCAMP4-211ENST00000588907 BSDC1Q9NW68 430 aaPredicted RBP21.02■□□□□ 0.96
SCAMP4-211ENST00000588907 KIAA1551Q9HCM1 1747 aa21.01■□□□□ 0.95
SCAMP4-211ENST00000588907 EYA2O00167 538 aa21.01■□□□□ 0.95
SCAMP4-211ENST00000588907 IL15P40933 162 aaPredicted RBP21.01■□□□□ 0.95
SCAMP4-211ENST00000588907 ZNF622Q969S3 477 aaKnown RBP eCLIP21.01■□□□□ 0.95
SCAMP4-211ENST00000588907 CNNM1Q9NRU3 951 aa21.01■□□□□ 0.95
SCAMP4-211ENST00000588907 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
SCAMP4-211ENST00000588907 CENPQQ7L2Z9 268 aaPredicted RBP21■□□□□ 0.95
SCAMP4-211ENST00000588907 KLHL34Q8N239 644 aa21■□□□□ 0.95
SCAMP4-211ENST00000588907 MROH5Q6ZUA9 1318 aa21■□□□□ 0.95
SCAMP4-211ENST00000588907 DPEP1P16444 411 aa20.99■□□□□ 0.95
SCAMP4-211ENST00000588907 CHRNA5P30532 468 aa20.99■□□□□ 0.95
SCAMP4-211ENST00000588907 GRIPAP1Q4V328 841 aa20.99■□□□□ 0.95
SCAMP4-211ENST00000588907 TTLL6Q8N841 843 aa20.99■□□□□ 0.95
SCAMP4-211ENST00000588907 CELF1Q92879 486 aaKnown RBP20.99■□□□□ 0.95
SCAMP4-211ENST00000588907 PIM2Q9P1W9 311 aa20.99■□□□□ 0.95
SCAMP4-211ENST00000588907 ZBTB47Q9UFB7 747 aaPredicted RBP20.99■□□□□ 0.95
SCAMP4-211ENST00000588907 PPEF1O14829 653 aaPredicted RBP20.98■□□□□ 0.95
SCAMP4-211ENST00000588907 CC2D2BQ6DHV5 1058 aa20.98■□□□□ 0.95
SCAMP4-211ENST00000588907 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
SCAMP4-211ENST00000588907 PA2G4Q9UQ80 394 aaKnown RBP20.98■□□□□ 0.95
SCAMP4-211ENST00000588907 GTF3C3Q9Y5Q9 886 aa20.98■□□□□ 0.95
SCAMP4-211ENST00000588907 SPEF2Q9C093 1822 aa20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 BRCA1P38398 1863 aaKnown RBP20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 SOGA3Q5TF21 947 aa20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 PRPF40BQ6NWY9 871 aaKnown RBP20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 KLHDC4Q8TBB5 520 aa20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 KIF1BPQ96EK5 621 aa20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 ZNF594Q96JF6 807 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms