RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 RTL9Q8NET4 1388 aa38.29■■■■□ 3.72
CAPNS1-206ENST00000588815 SMARCA5O60264 1052 aaPredicted RBP38.28■■■■□ 3.72
CAPNS1-206ENST00000588815 NFIXQ14938 502 aa38.28■■■■□ 3.72
CAPNS1-206ENST00000588815 GTF2E1P29083 439 aaPredicted RBP38.28■■■■□ 3.72
CAPNS1-206ENST00000588815 STK32BQ9NY57 414 aa38.28■■■■□ 3.72
CAPNS1-206ENST00000588815 SLC15A2Q16348 729 aa38.27■■■■□ 3.72
CAPNS1-206ENST00000588815 FAM161AQ3B820 660 aa38.27■■■■□ 3.72
CAPNS1-206ENST00000588815 NUTM1Q86Y26 1132 aa38.27■■■■□ 3.72
CAPNS1-206ENST00000588815 CIAO1O76071 339 aa38.26■■■■□ 3.72
CAPNS1-206ENST00000588815 COL23A1Q86Y22 540 aaPredicted RBP38.26■■■■□ 3.72
CAPNS1-206ENST00000588815 RIC1Q4ADV7 1423 aa38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 ANKRD18BA2A2Z9 1011 aa38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 HCLS1P14317 486 aaPredicted RBP38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 ERFEQ4G0M1 354 aa38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 CCDC152Q4G0S7 254 aa38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 PLEKHM2Q8IWE5 1019 aa38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 CLASRPQ8N2M8 674 aaKnown RBP38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 NLGN1Q8N2Q7 840 aa38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 KLHDC4Q8TBB5 520 aa38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 PNPLA7Q6ZV29 1317 aa38.25■■■■□ 3.71
CAPNS1-206ENST00000588815 TM4SF1P30408 202 aa38.24■■■■□ 3.71
CAPNS1-206ENST00000588815 SIL1Q9H173 461 aa38.24■■■■□ 3.71
CAPNS1-206ENST00000588815 SASH1O94885 1247 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 ITGA6P23229 1130 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 IL15P40933 162 aaPredicted RBP38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 OSBPL3Q9H4L5 887 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 GREM2Q9H772 168 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 NRXN2Q9P2S2 1712 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 LRP5O75197 1615 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 EYA2O00167 538 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 SF3B3Q15393 1217 aaKnown RBP38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 TAF7LQ5H9L4 462 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 DEFB132Q7Z7B7 95 aa38.22■■■■□ 3.71
CAPNS1-206ENST00000588815 IL1RAPL2Q9NP60 686 aa38.21■■■■□ 3.71
CAPNS1-206ENST00000588815 SALL3Q9BXA9 1300 aa38.2■■■■□ 3.71
CAPNS1-206ENST00000588815 C16orf71Q8IYS4 520 aaPredicted RBP38.2■■■■□ 3.71
CAPNS1-206ENST00000588815 SPEF2Q9C093 1822 aa38.19■■■■□ 3.7
CAPNS1-206ENST00000588815 ANO8Q9HCE9 1232 aaPredicted RBP38.19■■■■□ 3.7
CAPNS1-206ENST00000588815 ABCC12Q96J65 1359 aa38.19■■■■□ 3.7
CAPNS1-206ENST00000588815 CNBD1Q8NA66 436 aa38.18■■■■□ 3.7
CAPNS1-206ENST00000588815 AOX1Q06278 1338 aa38.18■■■■□ 3.7
CAPNS1-206ENST00000588815 MSH5O43196 834 aa38.17■■■■□ 3.7
CAPNS1-206ENST00000588815 NLRP3Q96P20 1036 aa38.17■■■■□ 3.7
CAPNS1-206ENST00000588815 STAP2Q9UGK3 403 aa38.17■■■■□ 3.7
CAPNS1-206ENST00000588815 NPHP1O15259 732 aa38.16■■■■□ 3.7
CAPNS1-206ENST00000588815 BMP2KLQ5H9B9 411 aa38.16■■■■□ 3.7
CAPNS1-206ENST00000588815 ATG9AQ7Z3C6 839 aa38.16■■■■□ 3.7
CAPNS1-206ENST00000588815 MX1P20591 662 aa38.15■■■■□ 3.7
CAPNS1-206ENST00000588815 CCDC85AQ96PX6 553 aaPredicted RBP38.15■■■■□ 3.7
CAPNS1-206ENST00000588815 GPR108Q9NPR9 543 aa38.15■■■■□ 3.7
CAPNS1-206ENST00000588815 SERPINB2P05120 415 aa38.15■■■■□ 3.7
CAPNS1-206ENST00000588815 PDE1AP54750 535 aa38.15■■■■□ 3.7
CAPNS1-206ENST00000588815 ZNF594Q96JF6 807 aaPredicted RBP38.15■■■■□ 3.7
CAPNS1-206ENST00000588815 AK9Q5TCS8 1911 aa38.13■■■■□ 3.69
CAPNS1-206ENST00000588815 TNRC6CQ9HCJ0 1690 aaKnown RBP38.13■■■■□ 3.69
CAPNS1-206ENST00000588815 OTUD7AQ8TE49 926 aaPredicted RBP38.13■■■■□ 3.69
CAPNS1-206ENST00000588815 POLRMTO00411 1230 aaKnown RBP38.12■■■■□ 3.69
CAPNS1-206ENST00000588815 ST5P78524 1137 aa38.12■■■■□ 3.69
CAPNS1-206ENST00000588815 CDC5LQ99459 802 aaKnown RBP38.12■■■■□ 3.69
CAPNS1-206ENST00000588815 IFIT2P09913 472 aaKnown RBP38.11■■■■□ 3.69
CAPNS1-206ENST00000588815 TTC22Q5TAA0 569 aa38.11■■■■□ 3.69
CAPNS1-206ENST00000588815 PRR5LQ6MZQ0 368 aa38.11■■■■□ 3.69
CAPNS1-206ENST00000588815 LDHAL6AQ6ZMR3 332 aa38.11■■■■□ 3.69
CAPNS1-206ENST00000588815 TTC41PQ6P2S7 1318 aa38.1■■■■□ 3.69
CAPNS1-206ENST00000588815 TFCP2Q12800 502 aa38.1■■■■□ 3.69
CAPNS1-206ENST00000588815 GPATCH3Q96I76 525 aa38.1■■■■□ 3.69
CAPNS1-206ENST00000588815 LRRC24Q50LG9 513 aa38.09■■■■□ 3.69
CAPNS1-206ENST00000588815 BCL11AQ9H165 835 aa38.09■■■■□ 3.69
CAPNS1-206ENST00000588815 CEP126Q9P2H0 1117 aa38.09■■■■□ 3.69
CAPNS1-206ENST00000588815 DDR1Q08345 913 aa38.09■■■■□ 3.69
CAPNS1-206ENST00000588815 AACSQ86V21 672 aa38.09■■■■□ 3.69
CAPNS1-206ENST00000588815 RIPOR2Q9Y4F9 1068 aa38.09■■■■□ 3.69
CAPNS1-206ENST00000588815 TAF1P21675 1872 aa38.08■■■■□ 3.69
CAPNS1-206ENST00000588815 TNNI3KQ59H18 835 aa38.08■■■■□ 3.69
CAPNS1-206ENST00000588815 EAF2Q96CJ1 260 aaPredicted RBP38.08■■■■□ 3.69
CAPNS1-206ENST00000588815 PUS3Q9BZE2 481 aaKnown RBP38.08■■■■□ 3.69
CAPNS1-206ENST00000588815 FPGT-TNNI3KV9GXZ4 949 aa38.08■■■■□ 3.69
CAPNS1-206ENST00000588815 IGHMBP2P38935 993 aaKnown RBP38.07■■■■□ 3.68
CAPNS1-206ENST00000588815 CNNM1Q9NRU3 951 aa38.07■■■■□ 3.68
CAPNS1-206ENST00000588815 A0A1B0GUL6 1792 aa38.06■■■■□ 3.68
CAPNS1-206ENST00000588815 MPHOSPH8Q99549 860 aa38.06■■■■□ 3.68
CAPNS1-206ENST00000588815 AKAP2Q9Y2D5 859 aa38.06■■■■□ 3.68
CAPNS1-206ENST00000588815 ANKRD31Q8N7Z5 1873 aa38.05■■■■□ 3.68
CAPNS1-206ENST00000588815 BACH2Q9BYV9 841 aa38.05■■■■□ 3.68
CAPNS1-206ENST00000588815 MROH5Q6ZUA9 1318 aa38.05■■■■□ 3.68
CAPNS1-206ENST00000588815 SEC31BQ9NQW1 1179 aa38.04■■■■□ 3.68
CAPNS1-206ENST00000588815 ERC2O15083 957 aa38.03■■■■□ 3.68
CAPNS1-206ENST00000588815 C3orf67Q6ZVT6 689 aa38.03■■■■□ 3.68
CAPNS1-206ENST00000588815 ZNF609O15014 1411 aa38.03■■■■□ 3.68
CAPNS1-206ENST00000588815 C8orf34Q49A92 452 aa38.03■■■■□ 3.68
CAPNS1-206ENST00000588815 ECHDC1Q9NTX5 307 aa38.03■■■■□ 3.68
CAPNS1-206ENST00000588815 PARP3Q9Y6F1 533 aa38.03■■■■□ 3.68
CAPNS1-206ENST00000588815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP38.03■■■■□ 3.68
CAPNS1-206ENST00000588815 ANKRD18AQ8IVF6 992 aa38.02■■■■□ 3.68
CAPNS1-206ENST00000588815 ARAP2Q8WZ64 1704 aa38.02■■■■□ 3.68
CAPNS1-206ENST00000588815 GSPT1P15170 499 aaKnown RBP38.01■■■■□ 3.67
CAPNS1-206ENST00000588815 SLC16A10Q8TF71 515 aa38.01■■■■□ 3.67
CAPNS1-206ENST00000588815 METTL24Q5JXM2 366 aa38■■■■□ 3.67
CAPNS1-206ENST00000588815 GLRX3O76003 335 aaKnown RBP37.99■■■■□ 3.67
CAPNS1-206ENST00000588815 MMP10P09238 476 aa37.99■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms