RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 GIGYF2Q6Y7W6 1299 aaKnown RBP28.84■■■□□ 2.21
CAPNS1-205ENST00000588780 UTP14AQ9BVJ6 771 aaKnown RBP28.84■■■□□ 2.21
CAPNS1-205ENST00000588780 CNOT7Q9UIV1 285 aaKnown RBP28.84■■■□□ 2.21
CAPNS1-205ENST00000588780 ABCC4O15439 1325 aa28.84■■■□□ 2.21
CAPNS1-205ENST00000588780 CDHR2Q9BYE9 1310 aa28.84■■■□□ 2.21
CAPNS1-205ENST00000588780 ZIC5Q96T25 663 aa28.83■■■□□ 2.21
CAPNS1-205ENST00000588780 RTFDC1Q9BY42 306 aaPredicted RBP28.82■■■□□ 2.2
CAPNS1-205ENST00000588780 PDE4DIPQ5VU43 2346 aa28.82■■■□□ 2.2
CAPNS1-205ENST00000588780 BBOX1O75936 387 aa28.81■■■□□ 2.2
CAPNS1-205ENST00000588780 SOX10P56693 466 aa28.81■■■□□ 2.2
CAPNS1-205ENST00000588780 EIF4A1P60842 406 aaKnown RBP28.81■■■□□ 2.2
CAPNS1-205ENST00000588780 KIAA2012Q0VF49 1180 aa28.81■■■□□ 2.2
CAPNS1-205ENST00000588780 SP8Q8IXZ3 490 aa28.8■■■□□ 2.2
CAPNS1-205ENST00000588780 MICALL2Q8IY33 904 aa28.8■■■□□ 2.2
CAPNS1-205ENST00000588780 SHTN1A0MZ66 631 aa28.79■■■□□ 2.2
CAPNS1-205ENST00000588780 PPP2R1AP30153 589 aa28.78■■■□□ 2.2
CAPNS1-205ENST00000588780 RGMBQ6NW40 437 aa28.78■■■□□ 2.2
CAPNS1-205ENST00000588780 DDX46Q7L014 1031 aaKnown RBP28.78■■■□□ 2.2
CAPNS1-205ENST00000588780 SLC10A5Q5PT55 438 aa28.77■■■□□ 2.2
CAPNS1-205ENST00000588780 DLK2Q6UY11 383 aa28.77■■■□□ 2.2
CAPNS1-205ENST00000588780 C2orf69Q8N8R5 385 aa28.77■■■□□ 2.2
CAPNS1-205ENST00000588780 THUMPD2Q9BTF0 503 aaKnown RBP28.77■■■□□ 2.2
CAPNS1-205ENST00000588780 KRT26Q7Z3Y9 468 aa28.76■■■□□ 2.19
CAPNS1-205ENST00000588780 ZBTB12Q9Y330 459 aaPredicted RBP28.76■■■□□ 2.19
CAPNS1-205ENST00000588780 HCLS1P14317 486 aaPredicted RBP28.75■■■□□ 2.19
CAPNS1-205ENST00000588780 EIF2S2P20042 333 aaKnown RBP28.75■■■□□ 2.19
CAPNS1-205ENST00000588780 SAMD7Q7Z3H4 446 aa28.75■■■□□ 2.19
CAPNS1-205ENST00000588780 CCDC102AQ96A19 550 aa28.75■■■□□ 2.19
CAPNS1-205ENST00000588780 GBA2Q9HCG7 927 aaPredicted RBP28.75■■■□□ 2.19
CAPNS1-205ENST00000588780 TRPA1O75762 1119 aa28.74■■■□□ 2.19
CAPNS1-205ENST00000588780 ZNF157P51786 506 aaPredicted RBP28.74■■■□□ 2.19
CAPNS1-205ENST00000588780 KIF23Q02241 960 aaPredicted RBP28.74■■■□□ 2.19
CAPNS1-205ENST00000588780 TBC1D10BQ4KMP7 808 aaPredicted RBP28.74■■■□□ 2.19
CAPNS1-205ENST00000588780 RBM26Q5T8P6 1007 aaKnown RBP28.74■■■□□ 2.19
CAPNS1-205ENST00000588780 ERBB4Q15303 1308 aa28.73■■■□□ 2.19
CAPNS1-205ENST00000588780 YDJCA8MPS7 323 aa28.73■■■□□ 2.19
CAPNS1-205ENST00000588780 DCPSQ96C86 337 aaKnown RBP28.73■■■□□ 2.19
CAPNS1-205ENST00000588780 SAGE1Q9NXZ1 904 aa28.73■■■□□ 2.19
CAPNS1-205ENST00000588780 KDM3BQ7LBC6 1761 aa28.73■■■□□ 2.19
CAPNS1-205ENST00000588780 GRAPQ13588 217 aa28.72■■■□□ 2.19
CAPNS1-205ENST00000588780 GRAPLQ8TC17 118 aaPredicted RBP28.72■■■□□ 2.19
CAPNS1-205ENST00000588780 RNF186Q9NXI6 227 aa28.7■■■□□ 2.18
CAPNS1-205ENST00000588780 TRMT112Q9UI30 125 aaKnown RBP28.7■■■□□ 2.18
CAPNS1-205ENST00000588780 FAM155AB1AL88 458 aaPredicted RBP28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 ADM5C9JUS6 153 aa28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 PSMD14O00487 310 aa28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 ANXA1P04083 346 aa28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 AIMP1Q12904 312 aaKnown RBP28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 WASHC4Q2M389 1173 aa28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 HSP90AB3PQ58FF7 597 aa28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 DPF2Q92785 391 aa28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 DBNDD1Q9H9R9 158 aa28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 TSPYL4Q9UJ04 414 aa28.69■■■□□ 2.18
CAPNS1-205ENST00000588780 RIMBP2O15034 1052 aa28.68■■■□□ 2.18
CAPNS1-205ENST00000588780 NSFL1CQ9UNZ2 370 aaKnown RBP28.67■■■□□ 2.18
CAPNS1-205ENST00000588780 C6orf229H3BNL8 230 aa28.66■■■□□ 2.18
CAPNS1-205ENST00000588780 NFE2L2Q16236 605 aa28.66■■■□□ 2.18
CAPNS1-205ENST00000588780 TMC4Q7Z404 712 aa28.66■■■□□ 2.18
CAPNS1-205ENST00000588780 NLRP10Q86W26 655 aa28.66■■■□□ 2.18
CAPNS1-205ENST00000588780 ZNF428Q96B54 188 aa28.66■■■□□ 2.18
CAPNS1-205ENST00000588780 TNRC18O15417 2968 aaPredicted RBP28.66■■■□□ 2.18
CAPNS1-205ENST00000588780 SH3TC1Q8TE82 1336 aa28.66■■■□□ 2.18
CAPNS1-205ENST00000588780 DLG5Q8TDM6 1919 aa28.65■■■□□ 2.18
CAPNS1-205ENST00000588780 CTU1Q7Z7A3 348 aaKnown RBP28.65■■■□□ 2.18
CAPNS1-205ENST00000588780 NECTIN2Q92692 538 aa28.65■■■□□ 2.18
CAPNS1-205ENST00000588780 MAPK8IP3Q9UPT6 1336 aa28.65■■■□□ 2.18
CAPNS1-205ENST00000588780 EGFRP00533 1210 aa28.64■■■□□ 2.18
CAPNS1-205ENST00000588780 PROSER3Q2NL68 480 aa28.64■■■□□ 2.18
CAPNS1-205ENST00000588780 PRPF38BQ5VTL8 546 aaKnown RBP28.64■■■□□ 2.18
CAPNS1-205ENST00000588780 SULF1Q8IWU6 871 aa28.64■■■□□ 2.18
CAPNS1-205ENST00000588780 PDIA6Q15084 440 aa28.63■■■□□ 2.17
CAPNS1-205ENST00000588780 COPS6Q7L5N1 327 aa28.63■■■□□ 2.17
CAPNS1-205ENST00000588780 RPS12P25398 132 aaKnown RBP28.62■■■□□ 2.17
CAPNS1-205ENST00000588780 LAMB2P55268 1798 aa28.62■■■□□ 2.17
CAPNS1-205ENST00000588780 AKAP11Q9UKA4 1901 aa28.61■■■□□ 2.17
CAPNS1-205ENST00000588780 SLC10A3P09131 477 aa28.61■■■□□ 2.17
CAPNS1-205ENST00000588780 DOK7Q18PE1 504 aa28.61■■■□□ 2.17
CAPNS1-205ENST00000588780 KIF4BQ2VIQ3 1234 aa28.61■■■□□ 2.17
CAPNS1-205ENST00000588780 XAGE3Q8WTP9 111 aa28.61■■■□□ 2.17
CAPNS1-205ENST00000588780 CSRNP1Q96S65 589 aa28.61■■■□□ 2.17
CAPNS1-205ENST00000588780 POLR2AP24928 1970 aaKnown RBP28.61■■■□□ 2.17
CAPNS1-205ENST00000588780 ANKRD36CQ5JPF3 1778 aa28.6■■■□□ 2.17
CAPNS1-205ENST00000588780 G3V3G9 751 aa28.6■■■□□ 2.17
CAPNS1-205ENST00000588780 ECE2O60344 883 aa28.6■■■□□ 2.17
CAPNS1-205ENST00000588780 TCIRG1Q13488 830 aa28.6■■■□□ 2.17
CAPNS1-205ENST00000588780 DCAF8Q5TAQ9 597 aa28.6■■■□□ 2.17
CAPNS1-205ENST00000588780 LRP10Q7Z4F1 713 aa28.6■■■□□ 2.17
CAPNS1-205ENST00000588780 EYA3Q99504 573 aa28.6■■■□□ 2.17
CAPNS1-205ENST00000588780 GGA3Q9NZ52 723 aa28.6■■■□□ 2.17
CAPNS1-205ENST00000588780 HDAC9Q9UKV0 1011 aa28.59■■■□□ 2.17
CAPNS1-205ENST00000588780 TAF1P21675 1872 aa28.59■■■□□ 2.17
CAPNS1-205ENST00000588780 PNNQ9H307 717 aaKnown RBP28.58■■■□□ 2.17
CAPNS1-205ENST00000588780 KCNQ5Q9NR82 932 aa28.58■■■□□ 2.17
CAPNS1-205ENST00000588780 PLEKHF1Q96S99 279 aa28.57■■■□□ 2.16
CAPNS1-205ENST00000588780 DUOX1Q9NRD9 1551 aa28.57■■■□□ 2.16
CAPNS1-205ENST00000588780 GPSM2P81274 684 aa28.56■■■□□ 2.16
CAPNS1-205ENST00000588780 REM2Q8IYK8 340 aaPredicted RBP28.56■■■□□ 2.16
CAPNS1-205ENST00000588780 CELF1Q92879 486 aaKnown RBP28.56■■■□□ 2.16
CAPNS1-205ENST00000588780 CDCA5Q96FF9 252 aa28.56■■■□□ 2.16
CAPNS1-205ENST00000588780 POLLQ9UGP5 575 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms