RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 DDX46Q7L014 1031 aaKnown RBP19.55■□□□□ 0.72
GHDC-209ENST00000588762 CRAMP1Q96RY5 1269 aa19.55■□□□□ 0.72
GHDC-209ENST00000588762 UTYO14607 1347 aa19.54■□□□□ 0.72
GHDC-209ENST00000588762 PLA2G12BQ9BX93 195 aa19.54■□□□□ 0.72
GHDC-209ENST00000588762 USP44Q9H0E7 712 aa19.54■□□□□ 0.72
GHDC-209ENST00000588762 PLIN1O60240 522 aa19.53■□□□□ 0.72
GHDC-209ENST00000588762 NBPF7P0C2Y1 421 aaPredicted RBP19.53■□□□□ 0.72
GHDC-209ENST00000588762 PRPF40BQ6NWY9 871 aaKnown RBP19.53■□□□□ 0.72
GHDC-209ENST00000588762 TMEM57Q8N5G2 664 aa19.53■□□□□ 0.72
GHDC-209ENST00000588762 HDAC5Q9UQL6 1122 aa19.53■□□□□ 0.72
GHDC-209ENST00000588762 UBTFL1P0CB47 393 aaPredicted RBP19.52■□□□□ 0.72
GHDC-209ENST00000588762 YBX3P16989 372 aaKnown RBP eCLIP19.52■□□□□ 0.724e-6■■□□□ 13.6
GHDC-209ENST00000588762 TTLL11Q8NHH1 800 aa19.52■□□□□ 0.72
GHDC-209ENST00000588762 GRIN3BO60391 1043 aa19.51■□□□□ 0.71
GHDC-209ENST00000588762 GNAI3P08754 354 aa19.51■□□□□ 0.71
GHDC-209ENST00000588762 ITPRIPQ8IWB1 547 aa19.51■□□□□ 0.71
GHDC-209ENST00000588762 RLBP1P12271 317 aa19.5■□□□□ 0.71
GHDC-209ENST00000588762 FOXO4P98177 505 aa19.5■□□□□ 0.71
GHDC-209ENST00000588762 PANK1Q8TE04 598 aa19.5■□□□□ 0.71
GHDC-209ENST00000588762 SUCLG2Q96I99 432 aa19.5■□□□□ 0.71
GHDC-209ENST00000588762 CCDC85AQ96PX6 553 aaPredicted RBP19.5■□□□□ 0.71
GHDC-209ENST00000588762 ZNF219Q9P2Y4 722 aaPredicted RBP19.5■□□□□ 0.71
GHDC-209ENST00000588762 GOLGB1Q14789 3259 aaKnown RBP19.49■□□□□ 0.71
GHDC-209ENST00000588762 SPEF2Q9C093 1822 aa19.49■□□□□ 0.71
GHDC-209ENST00000588762 BBOX1O75936 387 aa19.49■□□□□ 0.71
GHDC-209ENST00000588762 CSF1RP07333 972 aa19.49■□□□□ 0.71
GHDC-209ENST00000588762 GRAPQ13588 217 aa19.49■□□□□ 0.71
GHDC-209ENST00000588762 GRAPLQ8TC17 118 aaPredicted RBP19.49■□□□□ 0.71
GHDC-209ENST00000588762 MEIS3Q99687 375 aa19.49■□□□□ 0.71
GHDC-209ENST00000588762 TMX4Q9H1E5 349 aaPredicted RBP19.49■□□□□ 0.71
GHDC-209ENST00000588762 CHMP3Q9Y3E7 222 aa19.49■□□□□ 0.71
GHDC-209ENST00000588762 RTL9Q8NET4 1388 aa19.48■□□□□ 0.71
GHDC-209ENST00000588762 PPEF1O14829 653 aaPredicted RBP19.48■□□□□ 0.71
GHDC-209ENST00000588762 C21orf2O43822 256 aa19.48■□□□□ 0.71
GHDC-209ENST00000588762 PDE3AQ14432 1141 aa19.48■□□□□ 0.71
GHDC-209ENST00000588762 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
GHDC-209ENST00000588762 LMBR1LQ6UX01 489 aa19.48■□□□□ 0.71
GHDC-209ENST00000588762 CDC5LQ99459 802 aaKnown RBP19.48■□□□□ 0.71
GHDC-209ENST00000588762 GREM2Q9H772 168 aa19.48■□□□□ 0.71
GHDC-209ENST00000588762 RRP1P56182 461 aaKnown RBP19.47■□□□□ 0.71
GHDC-209ENST00000588762 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
GHDC-209ENST00000588762 TMC4Q7Z404 712 aa19.47■□□□□ 0.71
GHDC-209ENST00000588762 BICC1Q9H694 974 aaKnown RBP19.47■□□□□ 0.71
GHDC-209ENST00000588762 SEC31BQ9NQW1 1179 aa19.47■□□□□ 0.71
GHDC-209ENST00000588762 FER1L6Q2WGJ9 1857 aa19.46■□□□□ 0.71
GHDC-209ENST00000588762 RPS8P62241 208 aaKnown RBP19.46■□□□□ 0.71
GHDC-209ENST00000588762 IFIT5Q13325 482 aaKnown RBP19.46■□□□□ 0.71
GHDC-209ENST00000588762 FAM161AQ3B820 660 aa19.46■□□□□ 0.71
GHDC-209ENST00000588762 ARHGAP27Q6ZUM4 889 aa19.46■□□□□ 0.71
GHDC-209ENST00000588762 ANKRD18AQ8IVF6 992 aa19.46■□□□□ 0.71
GHDC-209ENST00000588762 CELF1Q92879 486 aaKnown RBP19.46■□□□□ 0.71
GHDC-209ENST00000588762 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
GHDC-209ENST00000588762 CHD4Q14839 1912 aa19.45■□□□□ 0.7
GHDC-209ENST00000588762 ANKRD18BA2A2Z9 1011 aa19.45■□□□□ 0.7
GHDC-209ENST00000588762 ITGA6P23229 1130 aa19.45■□□□□ 0.7
GHDC-209ENST00000588762 MVPQ14764 893 aaKnown RBP19.45■□□□□ 0.7
GHDC-209ENST00000588762 CCDC57Q2TAC2 916 aa19.45■□□□□ 0.7
GHDC-209ENST00000588762 CC2D2BQ6DHV5 1058 aa19.45■□□□□ 0.7
GHDC-209ENST00000588762 C7orf43Q8WVR3 580 aa19.45■□□□□ 0.7
GHDC-209ENST00000588762 GNAI2P04899 355 aa19.44■□□□□ 0.7
GHDC-209ENST00000588762 RABL6Q3YEC7 729 aaPredicted RBP19.44■□□□□ 0.7
GHDC-209ENST00000588762 CCDC93Q567U6 631 aa19.44■□□□□ 0.7
GHDC-209ENST00000588762 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
GHDC-209ENST00000588762 DDX19BQ9UMR2 479 aa19.44■□□□□ 0.7
GHDC-209ENST00000588762 COG6Q9Y2V7 657 aa19.44■□□□□ 0.7
GHDC-209ENST00000588762 ATP6V0A2Q9Y487 856 aa19.44■□□□□ 0.7
GHDC-209ENST00000588762 LRRFIP2Q9Y608 721 aaKnown RBP19.44■□□□□ 0.7
GHDC-209ENST00000588762 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 LRRC37AA6NMS7 1700 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 IGHMBP2P38935 993 aaKnown RBP19.43■□□□□ 0.7
GHDC-209ENST00000588762 GRIPAP1Q4V328 841 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 TAF7LQ5H9L4 462 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 C20orf194Q5TEA3 1177 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 SP8Q8IXZ3 490 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 RTKN2Q8IZC4 609 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 ANKRD44Q8N8A2 993 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 COL4A1P02462 1669 aa19.43■□□□□ 0.7
GHDC-209ENST00000588762 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
GHDC-209ENST00000588762 SBF1O95248 1867 aa19.41■□□□□ 0.7
GHDC-209ENST00000588762 OLFM4Q6UX06 510 aa19.41■□□□□ 0.7
GHDC-209ENST00000588762 MPHOSPH8Q99549 860 aa19.41■□□□□ 0.7
GHDC-209ENST00000588762 BSDC1Q9NW68 430 aaPredicted RBP19.4■□□□□ 0.7
GHDC-209ENST00000588762 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
GHDC-209ENST00000588762 DPP8Q6V1X1 898 aaPredicted RBP19.38■□□□□ 0.69
GHDC-209ENST00000588762 MPNDQ8N594 471 aa19.38■□□□□ 0.69
GHDC-209ENST00000588762 TAOK3Q9H2K8 898 aa19.38■□□□□ 0.69
GHDC-209ENST00000588762 LTBP3Q9NS15 1303 aa19.37■□□□□ 0.69
GHDC-209ENST00000588762 NFKBIEO00221 500 aa19.37■□□□□ 0.69
GHDC-209ENST00000588762 FKBP4Q02790 459 aaKnown RBP eCLIP19.37■□□□□ 0.69
GHDC-209ENST00000588762 RASSF7Q02833 373 aa19.37■□□□□ 0.69
GHDC-209ENST00000588762 LDHAL6AQ6ZMR3 332 aa19.37■□□□□ 0.69
GHDC-209ENST00000588762 ZNF594Q96JF6 807 aaPredicted RBP19.37■□□□□ 0.69
GHDC-209ENST00000588762 ANKIB1Q9P2G1 1089 aa19.37■□□□□ 0.69
GHDC-209ENST00000588762 DICER1Q9UPY3 1922 aaKnown RBP19.37■□□□□ 0.69
GHDC-209ENST00000588762 MTX1Q13505 466 aa19.36■□□□□ 0.69
GHDC-209ENST00000588762 SLC51AQ86UW1 340 aa19.36■□□□□ 0.69
GHDC-209ENST00000588762 SUPT20HQ8NEM7 779 aa19.36■□□□□ 0.69
GHDC-209ENST00000588762 PSMD1Q99460 953 aa19.36■□□□□ 0.69
GHDC-209ENST00000588762 C1orf115Q9H7X2 142 aa19.36■□□□□ 0.69
GHDC-209ENST00000588762 CNNM1Q9NRU3 951 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms