RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
RETREG3-206ENST00000588423 BEND3Q5T5X7 828 aa20.43■□□□□ 0.86
RETREG3-206ENST00000588423 SP8Q8IXZ3 490 aa20.43■□□□□ 0.86
RETREG3-206ENST00000588423 SSH1Q8WYL5 1049 aa20.43■□□□□ 0.86
RETREG3-206ENST00000588423 PTPRCP08575 1304 aa20.43■□□□□ 0.86
RETREG3-206ENST00000588423 F6X3S4 739 aa20.42■□□□□ 0.86
RETREG3-206ENST00000588423 CCDC152Q4G0S7 254 aa20.42■□□□□ 0.86
RETREG3-206ENST00000588423 PLA2G12BQ9BX93 195 aa20.41■□□□□ 0.86
RETREG3-206ENST00000588423 TIAM2Q8IVF5 1701 aa20.41■□□□□ 0.86
RETREG3-206ENST00000588423 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
RETREG3-206ENST00000588423 CASP7P55210 303 aa20.4■□□□□ 0.86
RETREG3-206ENST00000588423 CTSWP56202 376 aa20.4■□□□□ 0.86
RETREG3-206ENST00000588423 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
RETREG3-206ENST00000588423 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
RETREG3-206ENST00000588423 ZNF526Q8TF50 670 aaPredicted RBP20.4■□□□□ 0.86
RETREG3-206ENST00000588423 JARID2Q92833 1246 aaPredicted RBP20.4■□□□□ 0.86
RETREG3-206ENST00000588423 DICER1Q9UPY3 1922 aaKnown RBP20.4■□□□□ 0.86
RETREG3-206ENST00000588423 GLTPD2A6NH11 291 aa20.39■□□□□ 0.85
RETREG3-206ENST00000588423 ALDH1L1O75891 902 aa20.39■□□□□ 0.85
RETREG3-206ENST00000588423 CELF1Q92879 486 aaKnown RBP20.39■□□□□ 0.85
RETREG3-206ENST00000588423 VPS33BQ9H267 617 aa20.39■□□□□ 0.85
RETREG3-206ENST00000588423 ZNF277Q9NRM2 450 aaPredicted RBP20.39■□□□□ 0.85
RETREG3-206ENST00000588423 RTL9Q8NET4 1388 aa20.38■□□□□ 0.85
RETREG3-206ENST00000588423 ZBED9Q6R2W3 1325 aa20.38■□□□□ 0.85
RETREG3-206ENST00000588423 IARSP41252 1262 aaKnown RBP20.38■□□□□ 0.85
RETREG3-206ENST00000588423 RPS8P62241 208 aaKnown RBP20.38■□□□□ 0.85
RETREG3-206ENST00000588423 RTFDC1Q9BY42 306 aaPredicted RBP20.38■□□□□ 0.85
RETREG3-206ENST00000588423 SRCIN1Q9C0H9 1055 aa20.38■□□□□ 0.85
RETREG3-206ENST00000588423 SMC4Q9NTJ3 1288 aa20.38■□□□□ 0.85
RETREG3-206ENST00000588423 CCDC88AQ3V6T2 1871 aa20.38■□□□□ 0.85
RETREG3-206ENST00000588423 LRRC37AA6NMS7 1700 aa20.37■□□□□ 0.85
RETREG3-206ENST00000588423 DPY19L2Q6NUT2 758 aa20.37■□□□□ 0.85
RETREG3-206ENST00000588423 SUPT20HQ8NEM7 779 aa20.37■□□□□ 0.85
RETREG3-206ENST00000588423 TTLL11Q8NHH1 800 aa20.37■□□□□ 0.85
RETREG3-206ENST00000588423 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
RETREG3-206ENST00000588423 SLC4A10Q6U841 1118 aa20.36■□□□□ 0.85
RETREG3-206ENST00000588423 SLC51AQ86UW1 340 aa20.36■□□□□ 0.85
RETREG3-206ENST00000588423 MPNDQ8N594 471 aa20.36■□□□□ 0.85
RETREG3-206ENST00000588423 SEC31BQ9NQW1 1179 aa20.36■□□□□ 0.85
RETREG3-206ENST00000588423 KIF3CO14782 793 aa20.35■□□□□ 0.85
RETREG3-206ENST00000588423 RARSP54136 660 aaKnown RBP20.35■□□□□ 0.85
RETREG3-206ENST00000588423 DPP8Q6V1X1 898 aaPredicted RBP20.35■□□□□ 0.85
RETREG3-206ENST00000588423 GRM8O00222 908 aa20.34■□□□□ 0.85
RETREG3-206ENST00000588423 CSF1RP07333 972 aa20.34■□□□□ 0.85
RETREG3-206ENST00000588423 CDC5LQ99459 802 aaKnown RBP20.34■□□□□ 0.85
RETREG3-206ENST00000588423 COL4A1P02462 1669 aa20.34■□□□□ 0.85
RETREG3-206ENST00000588423 TAF1P21675 1872 aa20.33■□□□□ 0.85
RETREG3-206ENST00000588423 FZD9O00144 591 aa20.33■□□□□ 0.85
RETREG3-206ENST00000588423 ANKRD18AQ8IVF6 992 aa20.33■□□□□ 0.85
RETREG3-206ENST00000588423 JDP2Q8WYK2 163 aa20.33■□□□□ 0.85
RETREG3-206ENST00000588423 NMRK2Q9NPI5 230 aa20.33■□□□□ 0.85
RETREG3-206ENST00000588423 C9orf78Q9NZ63 289 aaPredicted RBP20.33■□□□□ 0.85
RETREG3-206ENST00000588423 MYH3P11055 1940 aa20.33■□□□□ 0.84
RETREG3-206ENST00000588423 CCDC85AQ96PX6 553 aaPredicted RBP20.32■□□□□ 0.84
RETREG3-206ENST00000588423 GREM2Q9H772 168 aa20.32■□□□□ 0.84
RETREG3-206ENST00000588423 UTYO14607 1347 aa20.31■□□□□ 0.84
RETREG3-206ENST00000588423 KIF16BQ96L93 1317 aa20.31■□□□□ 0.84
RETREG3-206ENST00000588423 DUOX1Q9NRD9 1551 aa20.31■□□□□ 0.84
RETREG3-206ENST00000588423 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
RETREG3-206ENST00000588423 PODXL2Q9NZ53 605 aa20.31■□□□□ 0.84
RETREG3-206ENST00000588423 WDR90Q96KV7 1748 aa20.3■□□□□ 0.84
RETREG3-206ENST00000588423 PPIP5K2O43314 1243 aa20.3■□□□□ 0.84
RETREG3-206ENST00000588423 C1QTNF8P60827 252 aa20.3■□□□□ 0.84
RETREG3-206ENST00000588423 FOXO4P98177 505 aa20.3■□□□□ 0.84
RETREG3-206ENST00000588423 KIAA2012Q0VF49 1180 aa20.3■□□□□ 0.84
RETREG3-206ENST00000588423 ARHGAP45Q92619 1136 aa20.3■□□□□ 0.84
RETREG3-206ENST00000588423 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
RETREG3-206ENST00000588423 RRAGCQ9HB90 399 aa20.3■□□□□ 0.84
RETREG3-206ENST00000588423 BSDC1Q9NW68 430 aaPredicted RBP20.3■□□□□ 0.84
RETREG3-206ENST00000588423 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
RETREG3-206ENST00000588423 COL4A5P29400 1685 aa20.29■□□□□ 0.84
RETREG3-206ENST00000588423 ITGA6P23229 1130 aa20.29■□□□□ 0.84
RETREG3-206ENST00000588423 GPSM2P81274 684 aa20.29■□□□□ 0.84
RETREG3-206ENST00000588423 AOC3Q16853 763 aa20.29■□□□□ 0.84
RETREG3-206ENST00000588423 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
RETREG3-206ENST00000588423 LTBP1Q14766 1721 aa20.29■□□□□ 0.84
RETREG3-206ENST00000588423 VEGFAP15692 232 aaPredicted RBP20.28■□□□□ 0.84
RETREG3-206ENST00000588423 NIM1KQ8IY84 436 aa20.28■□□□□ 0.84
RETREG3-206ENST00000588423 L3MBTL3Q96JM7 780 aaPredicted RBP20.28■□□□□ 0.84
RETREG3-206ENST00000588423 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.84
RETREG3-206ENST00000588423 TOMM70O94826 608 aa20.27■□□□□ 0.84
RETREG3-206ENST00000588423 DDNO94850 711 aaPredicted RBP20.27■□□□□ 0.84
RETREG3-206ENST00000588423 IGHMBP2P38935 993 aaKnown RBP20.27■□□□□ 0.84
RETREG3-206ENST00000588423 CCT4P50991 539 aaKnown RBP20.27■□□□□ 0.84
RETREG3-206ENST00000588423 EIF6P56537 245 aaKnown RBP20.27■□□□□ 0.84
RETREG3-206ENST00000588423 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
RETREG3-206ENST00000588423 EYA3Q99504 573 aa20.27■□□□□ 0.84
RETREG3-206ENST00000588423 ANKRD18BA2A2Z9 1011 aa20.26■□□□□ 0.83
RETREG3-206ENST00000588423 POTECB2RU33 542 aa20.26■□□□□ 0.83
RETREG3-206ENST00000588423 NBPF7P0C2Y1 421 aaPredicted RBP20.26■□□□□ 0.83
RETREG3-206ENST00000588423 WASHC4Q2M389 1173 aa20.26■□□□□ 0.83
RETREG3-206ENST00000588423 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
RETREG3-206ENST00000588423 GPC2Q8N158 579 aa20.26■□□□□ 0.83
RETREG3-206ENST00000588423 TBC1D16Q8TBP0 767 aa20.26■□□□□ 0.83
RETREG3-206ENST00000588423 POLLQ9UGP5 575 aa20.26■□□□□ 0.83
RETREG3-206ENST00000588423 XDHP47989 1333 aa20.26■□□□□ 0.83
RETREG3-206ENST00000588423 IPO8O15397 1037 aaKnown RBP20.25■□□□□ 0.83
RETREG3-206ENST00000588423 IFIT5Q13325 482 aaKnown RBP20.25■□□□□ 0.83
RETREG3-206ENST00000588423 EPHA10Q5JZY3 1008 aa20.25■□□□□ 0.83
RETREG3-206ENST00000588423 LMBR1LQ6UX01 489 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms