RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-216ENST00000588090 UTYO14607 1347 aa29.55■■■□□ 2.32
CIRBP-216ENST00000588090 SOGA3Q5TF21 947 aa29.54■■■□□ 2.32
CIRBP-216ENST00000588090 INTS3Q68E01 1043 aaKnown RBP29.54■■■□□ 2.32
CIRBP-216ENST00000588090 CHD4Q14839 1912 aa29.53■■■□□ 2.32
CIRBP-216ENST00000588090 TAF1P21675 1872 aa29.53■■■□□ 2.32
CIRBP-216ENST00000588090 C21orf2O43822 256 aa29.52■■■□□ 2.32
CIRBP-216ENST00000588090 NBPF7P0C2Y1 421 aaPredicted RBP29.51■■■□□ 2.31
CIRBP-216ENST00000588090 GRAPQ13588 217 aa29.51■■■□□ 2.31
CIRBP-216ENST00000588090 TTLL11Q8NHH1 800 aa29.51■■■□□ 2.31
CIRBP-216ENST00000588090 GRAPLQ8TC17 118 aaPredicted RBP29.51■■■□□ 2.31
CIRBP-216ENST00000588090 CLUAP1Q96AJ1 413 aa29.51■■■□□ 2.31
CIRBP-216ENST00000588090 FTSJ3Q8IY81 847 aaKnown RBP29.5■■■□□ 2.31
CIRBP-216ENST00000588090 USP44Q9H0E7 712 aa29.5■■■□□ 2.31
CIRBP-216ENST00000588090 RTL9Q8NET4 1388 aa29.5■■■□□ 2.31
CIRBP-216ENST00000588090 FER1L6Q2WGJ9 1857 aa29.5■■■□□ 2.31
CIRBP-216ENST00000588090 PPEF1O14829 653 aaPredicted RBP29.49■■■□□ 2.31
CIRBP-216ENST00000588090 BBOX1O75936 387 aa29.49■■■□□ 2.31
CIRBP-216ENST00000588090 ARHGAP27Q6ZUM4 889 aa29.49■■■□□ 2.31
CIRBP-216ENST00000588090 C7orf43Q8WVR3 580 aa29.49■■■□□ 2.31
CIRBP-216ENST00000588090 ZNF219Q9P2Y4 722 aaPredicted RBP29.49■■■□□ 2.31
CIRBP-216ENST00000588090 TNNQ9UQP3 1299 aa29.49■■■□□ 2.31
CIRBP-216ENST00000588090 DZIP1LQ8IYY4 767 aaKnown RBP29.48■■■□□ 2.31
CIRBP-216ENST00000588090 TMC4Q7Z404 712 aa29.48■■■□□ 2.31
CIRBP-216ENST00000588090 CCDC85AQ96PX6 553 aaPredicted RBP29.48■■■□□ 2.31
CIRBP-216ENST00000588090 CSF1RP07333 972 aa29.47■■■□□ 2.31
CIRBP-216ENST00000588090 MS4A1P11836 297 aa29.47■■■□□ 2.31
CIRBP-216ENST00000588090 CCDC93Q567U6 631 aa29.47■■■□□ 2.31
CIRBP-216ENST00000588090 CC2D2BQ6DHV5 1058 aa29.47■■■□□ 2.31
CIRBP-216ENST00000588090 FOXO4P98177 505 aa29.46■■■□□ 2.31
CIRBP-216ENST00000588090 SUCLG2Q96I99 432 aa29.46■■■□□ 2.31
CIRBP-216ENST00000588090 TMX4Q9H1E5 349 aaPredicted RBP29.46■■■□□ 2.31
CIRBP-216ENST00000588090 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.45■■■□□ 2.31
CIRBP-216ENST00000588090 CELF1Q92879 486 aaKnown RBP29.45■■■□□ 2.31
CIRBP-216ENST00000588090 GREM2Q9H772 168 aa29.45■■■□□ 2.31
CIRBP-216ENST00000588090 SEC31BQ9NQW1 1179 aa29.45■■■□□ 2.31
CIRBP-216ENST00000588090 HDAC5Q9UQL6 1122 aa29.45■■■□□ 2.31
CIRBP-216ENST00000588090 LRRC37AA6NMS7 1700 aa29.45■■■□□ 2.3
CIRBP-216ENST00000588090 UBTFL1P0CB47 393 aaPredicted RBP29.44■■■□□ 2.3
CIRBP-216ENST00000588090 GRIPAP1Q4V328 841 aa29.44■■■□□ 2.3
CIRBP-216ENST00000588090 TMEM57Q8N5G2 664 aa29.44■■■□□ 2.3
CIRBP-216ENST00000588090 CDC5LQ99459 802 aaKnown RBP29.44■■■□□ 2.3
CIRBP-216ENST00000588090 ATP6V0A2Q9Y487 856 aa29.44■■■□□ 2.3
CIRBP-216ENST00000588090 RPS8P62241 208 aaKnown RBP29.43■■■□□ 2.3
CIRBP-216ENST00000588090 RTKN2Q8IZC4 609 aa29.43■■■□□ 2.3
CIRBP-216ENST00000588090 COL4A1P02462 1669 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 FAM161AQ3B820 660 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 EPHA10Q5JZY3 1008 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 KAZALD1Q96I82 304 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 SBF1O95248 1867 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 SPEF2Q9C093 1822 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 GNAI3P08754 354 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 LMBR1LQ6UX01 489 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 ANKRD18AQ8IVF6 992 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 SP8Q8IXZ3 490 aa29.42■■■□□ 2.3
CIRBP-216ENST00000588090 ITGA6P23229 1130 aa29.41■■■□□ 2.3
CIRBP-216ENST00000588090 OLFM4Q6UX06 510 aa29.41■■■□□ 2.3
CIRBP-216ENST00000588090 MEIS3Q99687 375 aa29.41■■■□□ 2.3
CIRBP-216ENST00000588090 CHMP3Q9Y3E7 222 aa29.41■■■□□ 2.3
CIRBP-216ENST00000588090 LTBP3Q9NS15 1303 aa29.4■■■□□ 2.3
CIRBP-216ENST00000588090 NFKBIEO00221 500 aa29.4■■■□□ 2.3
CIRBP-216ENST00000588090 RLBP1P12271 317 aa29.4■■■□□ 2.3
CIRBP-216ENST00000588090 TAOK3Q9H2K8 898 aa29.4■■■□□ 2.3
CIRBP-216ENST00000588090 BICC1Q9H694 974 aaKnown RBP29.4■■■□□ 2.3
CIRBP-216ENST00000588090 SNED1Q8TER0 1413 aa29.4■■■□□ 2.3
CIRBP-216ENST00000588090 ANKRD18BA2A2Z9 1011 aa29.39■■■□□ 2.3
CIRBP-216ENST00000588090 IFIT5Q13325 482 aaKnown RBP29.39■■■□□ 2.3
CIRBP-216ENST00000588090 CCDC88AQ3V6T2 1871 aa29.39■■■□□ 2.3
CIRBP-216ENST00000588090 RABL6Q3YEC7 729 aaPredicted RBP29.39■■■□□ 2.3
CIRBP-216ENST00000588090 ITPRIPQ8IWB1 547 aa29.38■■■□□ 2.29
CIRBP-216ENST00000588090 PLIN1O60240 522 aa29.37■■■□□ 2.29
CIRBP-216ENST00000588090 RASSF7Q02833 373 aa29.37■■■□□ 2.29
CIRBP-216ENST00000588090 CCDC57Q2TAC2 916 aa29.37■■■□□ 2.29
CIRBP-216ENST00000588090 PANK1Q8TE04 598 aa29.37■■■□□ 2.29
CIRBP-216ENST00000588090 IGHMBP2P38935 993 aaKnown RBP29.36■■■□□ 2.29
CIRBP-216ENST00000588090 FKBP4Q02790 459 aaKnown RBP eCLIP29.36■■■□□ 2.29
CIRBP-216ENST00000588090 ANKRD44Q8N8A2 993 aa29.36■■■□□ 2.29
CIRBP-216ENST00000588090 PSMD1Q99460 953 aa29.36■■■□□ 2.29
CIRBP-216ENST00000588090 LMNB1P20700 586 aa29.35■■■□□ 2.29
CIRBP-216ENST00000588090 BSDC1Q9NW68 430 aaPredicted RBP29.35■■■□□ 2.29
CIRBP-216ENST00000588090 DICER1Q9UPY3 1922 aaKnown RBP29.34■■■□□ 2.29
CIRBP-216ENST00000588090 PDE3AQ14432 1141 aa29.34■■■□□ 2.29
CIRBP-216ENST00000588090 MPHOSPH8Q99549 860 aa29.34■■■□□ 2.29
CIRBP-216ENST00000588090 LRRFIP2Q9Y608 721 aaKnown RBP29.34■■■□□ 2.29
CIRBP-216ENST00000588090 DPP8Q6V1X1 898 aaPredicted RBP29.33■■■□□ 2.29
CIRBP-216ENST00000588090 SLC51AQ86UW1 340 aa29.33■■■□□ 2.29
CIRBP-216ENST00000588090 MPNDQ8N594 471 aa29.33■■■□□ 2.29
CIRBP-216ENST00000588090 TAF7LQ5H9L4 462 aa29.32■■■□□ 2.28
CIRBP-216ENST00000588090 LTBP1Q14766 1721 aa29.32■■■□□ 2.28
CIRBP-216ENST00000588090 GNAI2P04899 355 aa29.31■■■□□ 2.28
CIRBP-216ENST00000588090 MVPQ14764 893 aaKnown RBP29.3■■■□□ 2.28
CIRBP-216ENST00000588090 C9orf131Q5VYM1 1079 aa29.3■■■□□ 2.28
CIRBP-216ENST00000588090 SUPT20HQ8NEM7 779 aa29.3■■■□□ 2.28
CIRBP-216ENST00000588090 RNF181Q9P0P0 153 aa29.3■■■□□ 2.28
CIRBP-216ENST00000588090 NSFL1CQ9UNZ2 370 aaKnown RBP29.3■■■□□ 2.28
CIRBP-216ENST00000588090 ZBTB7BO15156 539 aaPredicted RBP29.29■■■□□ 2.28
CIRBP-216ENST00000588090 RTFDC1Q9BY42 306 aaPredicted RBP29.29■■■□□ 2.28
CIRBP-216ENST00000588090 TIAM2Q8IVF5 1701 aa29.29■■■□□ 2.28
CIRBP-216ENST00000588090 RRP1P56182 461 aaKnown RBP29.29■■■□□ 2.28
CIRBP-216ENST00000588090 DDX19BQ9UMR2 479 aa29.29■■■□□ 2.28
CIRBP-216ENST00000588090 DUOX1Q9NRD9 1551 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms