RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CCDC152Q4G0S7 254 aa12.84□□□□□ -0.35
TPM4-207ENST00000588032 BEND3Q5T5X7 828 aa12.84□□□□□ -0.35
TPM4-207ENST00000588032 SP8Q8IXZ3 490 aa12.84□□□□□ -0.35
TPM4-207ENST00000588032 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
TPM4-207ENST00000588032 PSMD1Q99460 953 aa12.84□□□□□ -0.35
TPM4-207ENST00000588032 ABCC4O15439 1325 aa12.84□□□□□ -0.35
TPM4-207ENST00000588032 F6X3S4 739 aa12.83□□□□□ -0.36
TPM4-207ENST00000588032 ALDH1L1O75891 902 aa12.83□□□□□ -0.36
TPM4-207ENST00000588032 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
TPM4-207ENST00000588032 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
TPM4-207ENST00000588032 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
TPM4-207ENST00000588032 UBE3BQ7Z3V4 1068 aa12.82□□□□□ -0.36
TPM4-207ENST00000588032 PLA2G12BQ9BX93 195 aa12.82□□□□□ -0.36
TPM4-207ENST00000588032 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
TPM4-207ENST00000588032 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
TPM4-207ENST00000588032 PRELPP51888 382 aa12.81□□□□□ -0.36
TPM4-207ENST00000588032 CTSWP56202 376 aa12.81□□□□□ -0.36
TPM4-207ENST00000588032 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
TPM4-207ENST00000588032 DPY19L2Q6NUT2 758 aa12.81□□□□□ -0.36
TPM4-207ENST00000588032 SLC4A10Q6U841 1118 aa12.81□□□□□ -0.36
TPM4-207ENST00000588032 SUPT20HQ8NEM7 779 aa12.81□□□□□ -0.36
TPM4-207ENST00000588032 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
TPM4-207ENST00000588032 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
TPM4-207ENST00000588032 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
TPM4-207ENST00000588032 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
TPM4-207ENST00000588032 OLFM4Q6UX06 510 aa12.8□□□□□ -0.36
TPM4-207ENST00000588032 TTLL11Q8NHH1 800 aa12.8□□□□□ -0.36
TPM4-207ENST00000588032 DDX60Q8IY21 1712 aaKnown RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 SBF1O95248 1867 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 GLTPD2A6NH11 291 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 GRM8O00222 908 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 IARSP41252 1262 aaKnown RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 CASP7P55210 303 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 MPNDQ8N594 471 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 JDP2Q8WYK2 163 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 CDC5LQ99459 802 aaKnown RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 BCL2L13Q9BXK5 485 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 RTFDC1Q9BY42 306 aaPredicted RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 ZNF277Q9NRM2 450 aaPredicted RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 C9orf78Q9NZ63 289 aaPredicted RBP12.79□□□□□ -0.36
TPM4-207ENST00000588032 RTL9Q8NET4 1388 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
TPM4-207ENST00000588032 CSF1RP07333 972 aa12.78□□□□□ -0.36
TPM4-207ENST00000588032 DPP8Q6V1X1 898 aaPredicted RBP12.78□□□□□ -0.36
TPM4-207ENST00000588032 ANKRD18AQ8IVF6 992 aa12.78□□□□□ -0.36
TPM4-207ENST00000588032 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
TPM4-207ENST00000588032 API5Q9BZZ5 524 aaKnown RBP12.78□□□□□ -0.36
TPM4-207ENST00000588032 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
TPM4-207ENST00000588032 KIF16BQ96L93 1317 aa12.78□□□□□ -0.36
TPM4-207ENST00000588032 LAMB2P55268 1798 aa12.78□□□□□ -0.36
TPM4-207ENST00000588032 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
TPM4-207ENST00000588032 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.37
TPM4-207ENST00000588032 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
TPM4-207ENST00000588032 FZD9O00144 591 aa12.76□□□□□ -0.37
TPM4-207ENST00000588032 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
TPM4-207ENST00000588032 LARGE2Q8N3Y3 721 aa12.76□□□□□ -0.37
TPM4-207ENST00000588032 GREM2Q9H772 168 aa12.76□□□□□ -0.37
TPM4-207ENST00000588032 BSDC1Q9NW68 430 aaPredicted RBP12.76□□□□□ -0.37
TPM4-207ENST00000588032 NSFL1CQ9UNZ2 370 aaKnown RBP12.76□□□□□ -0.37
TPM4-207ENST00000588032 UTYO14607 1347 aa12.76□□□□□ -0.37
TPM4-207ENST00000588032 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
TPM4-207ENST00000588032 IGHMBP2P38935 993 aaKnown RBP12.75□□□□□ -0.37
TPM4-207ENST00000588032 FOXO4P98177 505 aa12.75□□□□□ -0.37
TPM4-207ENST00000588032 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
TPM4-207ENST00000588032 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
TPM4-207ENST00000588032 HDAC5Q9UQL6 1122 aa12.75□□□□□ -0.37
TPM4-207ENST00000588032 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
TPM4-207ENST00000588032 KIF3CO14782 793 aa12.74□□□□□ -0.37
TPM4-207ENST00000588032 PPIP5K2O43314 1243 aa12.74□□□□□ -0.37
TPM4-207ENST00000588032 ITGA6P23229 1130 aa12.74□□□□□ -0.37
TPM4-207ENST00000588032 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
TPM4-207ENST00000588032 KIAA2012Q0VF49 1180 aa12.74□□□□□ -0.37
TPM4-207ENST00000588032 IFIT5Q13325 482 aaKnown RBP12.74□□□□□ -0.37
TPM4-207ENST00000588032 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
TPM4-207ENST00000588032 EYA3Q99504 573 aa12.74□□□□□ -0.37
TPM4-207ENST00000588032 ANKIB1Q9P2G1 1089 aa12.74□□□□□ -0.37
TPM4-207ENST00000588032 DICER1Q9UPY3 1922 aaKnown RBP12.73□□□□□ -0.37
TPM4-207ENST00000588032 C6orf229H3BNL8 230 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
TPM4-207ENST00000588032 GPSM2P81274 684 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 WASHC4Q2M389 1173 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 CCDC57Q2TAC2 916 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
TPM4-207ENST00000588032 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 USP44Q9H0E7 712 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 RRAGCQ9HB90 399 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 NMRK2Q9NPI5 230 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
TPM4-207ENST00000588032 XDHP47989 1333 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 TOMM70O94826 608 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 DDNO94850 711 aaPredicted RBP12.72□□□□□ -0.37
TPM4-207ENST00000588032 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 AOC3Q16853 763 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms