RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 SMARCA2P51531 1590 aa8.9□□□□□ -0.98
RPRD1A-205ENST00000587563 HMGXB3Q12766 1538 aa8.9□□□□□ -0.98
RPRD1A-205ENST00000587563 PERM1Q5SV97 790 aa8.9□□□□□ -0.98
RPRD1A-205ENST00000587563 INTS5Q6P9B9 1019 aaKnown RBP8.9□□□□□ -0.98
RPRD1A-205ENST00000587563 GAS2L2Q8NHY3 880 aa8.9□□□□□ -0.98
RPRD1A-205ENST00000587563 TRPM4Q8TD43 1214 aa8.9□□□□□ -0.98
RPRD1A-205ENST00000587563 C11orf16Q9NQ32 467 aa8.9□□□□□ -0.98
RPRD1A-205ENST00000587563 RAXQ9Y2V3 346 aa8.9□□□□□ -0.98
RPRD1A-205ENST00000587563 BAZ1AQ9NRL2 1556 aaPredicted RBP8.9□□□□□ -0.99
RPRD1A-205ENST00000587563 BAZ1BQ9UIG0 1483 aaKnown RBP8.89□□□□□ -0.99
RPRD1A-205ENST00000587563 USP17L5A8MUK1 530 aa8.89□□□□□ -0.99
RPRD1A-205ENST00000587563 IGLV1-40P01703 118 aa8.89□□□□□ -0.99
RPRD1A-205ENST00000587563 GRIK1P39086 918 aa8.89□□□□□ -0.99
RPRD1A-205ENST00000587563 RBM19Q9Y4C8 960 aaKnown RBP8.89□□□□□ -0.99
RPRD1A-205ENST00000587563 DEAF1O75398 565 aaPredicted RBP8.88□□□□□ -0.99
RPRD1A-205ENST00000587563 MAP4K3Q8IVH8 894 aa8.88□□□□□ -0.99
RPRD1A-205ENST00000587563 F8W735 103 aaPredicted RBP8.87□□□□□ -0.99
RPRD1A-205ENST00000587563 TGFBR3LH3BV60 316 aa8.87□□□□□ -0.99
RPRD1A-205ENST00000587563 GPLD1P80108 840 aa8.87□□□□□ -0.99
RPRD1A-205ENST00000587563 DHX32Q7L7V1 743 aaKnown RBP8.87□□□□□ -0.99
RPRD1A-205ENST00000587563 CUX2O14529 1486 aa8.87□□□□□ -0.99
RPRD1A-205ENST00000587563 ZBTB7BO15156 539 aaPredicted RBP8.86□□□□□ -0.99
RPRD1A-205ENST00000587563 Q6ZS46 218 aa8.86□□□□□ -0.99
RPRD1A-205ENST00000587563 DEPDC4Q8N2C3 294 aa8.86□□□□□ -0.99
RPRD1A-205ENST00000587563 STOML1Q9UBI4 398 aa8.86□□□□□ -0.99
RPRD1A-205ENST00000587563 RTN1Q16799 776 aa8.85□□□□□ -0.99
RPRD1A-205ENST00000587563 WWC1Q8IX03 1113 aa8.85□□□□□ -0.99
RPRD1A-205ENST00000587563 LARGE2Q8N3Y3 721 aa8.85□□□□□ -0.99
RPRD1A-205ENST00000587563 C2orf49Q9BVC5 232 aaPredicted RBP8.85□□□□□ -0.99
RPRD1A-205ENST00000587563 ALG2Q9H553 416 aa8.85□□□□□ -0.99
RPRD1A-205ENST00000587563 PEG3Q9GZU2 1588 aa8.85□□□□□ -0.99
RPRD1A-205ENST00000587563 PALM3A6NDB9 673 aaPredicted RBP8.84□□□□□ -0.99
RPRD1A-205ENST00000587563 ALX3O95076 343 aa8.84□□□□□ -0.99
RPRD1A-205ENST00000587563 MED26O95402 600 aa8.84□□□□□ -0.99
RPRD1A-205ENST00000587563 TGFB1P01137 390 aa8.84□□□□□ -0.99
RPRD1A-205ENST00000587563 PLEKHM2Q8IWE5 1019 aa8.84□□□□□ -0.99
RPRD1A-205ENST00000587563 SMG9Q9H0W8 520 aaKnown RBP8.84□□□□□ -0.99
RPRD1A-205ENST00000587563 DHX15O43143 795 aaKnown RBP8.83□□□□□ -1
RPRD1A-205ENST00000587563 GLB1P16278 677 aa8.83□□□□□ -1
RPRD1A-205ENST00000587563 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
RPRD1A-205ENST00000587563 ATAD2Q6PL18 1390 aa8.83□□□□□ -1
RPRD1A-205ENST00000587563 ZBTB42B2RXF5 422 aa8.82□□□□□ -1
RPRD1A-205ENST00000587563 RARAP10276 462 aa8.82□□□□□ -1
RPRD1A-205ENST00000587563 NRLP54845 237 aa8.82□□□□□ -1
RPRD1A-205ENST00000587563 NGLY1Q96IV0 654 aa8.82□□□□□ -1
RPRD1A-205ENST00000587563 KIF21AQ7Z4S6 1674 aa8.81□□□□□ -1
RPRD1A-205ENST00000587563 C21orf2O43822 256 aa8.81□□□□□ -1
RPRD1A-205ENST00000587563 WNT11O96014 354 aa8.81□□□□□ -1
RPRD1A-205ENST00000587563 EIF2AK2P19525 551 aaKnown RBP8.81□□□□□ -1
RPRD1A-205ENST00000587563 SPINK2P20155 84 aa8.81□□□□□ -1
RPRD1A-205ENST00000587563 CACTIN-AS1Q8N1I8 211 aa8.81□□□□□ -1
RPRD1A-205ENST00000587563 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
RPRD1A-205ENST00000587563 CEP41Q9BYV8 373 aa8.81□□□□□ -1
RPRD1A-205ENST00000587563 DMGDHQ9UI17 866 aaKnown RBP8.81□□□□□ -1
RPRD1A-205ENST00000587563 WIZO95785 1651 aa8.81□□□□□ -1
RPRD1A-205ENST00000587563 CLDN10P78369 228 aa8.8□□□□□ -1
RPRD1A-205ENST00000587563 PLAURQ03405 335 aa8.8□□□□□ -1
RPRD1A-205ENST00000587563 SIX5Q8N196 739 aa8.8□□□□□ -1
RPRD1A-205ENST00000587563 OGFOD1Q8N543 542 aa8.8□□□□□ -1
RPRD1A-205ENST00000587563 MUC3BQ9H195 1237 aa8.8□□□□□ -1
RPRD1A-205ENST00000587563 THOC2Q8NI27 1593 aaKnown RBP8.8□□□□□ -1
RPRD1A-205ENST00000587563 MLLT1Q03111 559 aaPredicted RBP8.79□□□□□ -1
RPRD1A-205ENST00000587563 UVSSAQ2YD98 709 aa8.79□□□□□ -1
RPRD1A-205ENST00000587563 KRT25Q7Z3Z0 450 aa8.79□□□□□ -1
RPRD1A-205ENST00000587563 ZDHHC13Q8IUH4 622 aa8.79□□□□□ -1
RPRD1A-205ENST00000587563 RBSNQ9H1K0 784 aa8.79□□□□□ -1
RPRD1A-205ENST00000587563 ZFATQ9P243 1243 aa8.79□□□□□ -1
RPRD1A-205ENST00000587563 USP17L3A6NCW0 530 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 USP17L4A6NCW7 530 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 TARSP26639 723 aaKnown RBP8.78□□□□□ -1
RPRD1A-205ENST00000587563 INPP5BP32019 993 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 ARSDP51689 593 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 NFIAQ12857 509 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 USP17L2Q6R6M4 530 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 USP17L1Q7RTZ2 530 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 DTX1Q86Y01 620 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 CHMP7Q8WUX9 453 aaPredicted RBP8.78□□□□□ -1
RPRD1A-205ENST00000587563 SCG3Q8WXD2 468 aaKnown RBP8.78□□□□□ -1
RPRD1A-205ENST00000587563 PLD4Q96BZ4 506 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 IFT43Q96FT9 208 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 BCANQ96GW7 911 aa8.78□□□□□ -1
RPRD1A-205ENST00000587563 IDH3AP50213 366 aa8.77□□□□□ -1.01
RPRD1A-205ENST00000587563 CADPSQ9ULU8 1353 aa8.76□□□□□ -1.01
RPRD1A-205ENST00000587563 GHRHP01286 108 aa8.76□□□□□ -1.01
RPRD1A-205ENST00000587563 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.76□□□□□ -1.01
RPRD1A-205ENST00000587563 IL22RA1Q8N6P7 574 aa8.76□□□□□ -1.01
RPRD1A-205ENST00000587563 DBNDD2Q9BQY9 259 aa8.76□□□□□ -1.01
RPRD1A-205ENST00000587563 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
RPRD1A-205ENST00000587563 LAMC3Q9Y6N6 1575 aa8.76□□□□□ -1.01
RPRD1A-205ENST00000587563 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
RPRD1A-205ENST00000587563 SASH3O75995 380 aa8.75□□□□□ -1.01
RPRD1A-205ENST00000587563 SETDB1Q15047 1291 aa8.75□□□□□ -1.01
RPRD1A-205ENST00000587563 RNF43Q68DV7 783 aa8.75□□□□□ -1.01
RPRD1A-205ENST00000587563 GDF6Q6KF10 455 aaPredicted RBP8.75□□□□□ -1.01
RPRD1A-205ENST00000587563 HFE2Q6ZVN8 426 aa8.75□□□□□ -1.01
RPRD1A-205ENST00000587563 BCS1LQ9Y276 419 aa8.75□□□□□ -1.01
RPRD1A-205ENST00000587563 LOC102724428A0A0B4J2F2 783 aa8.74□□□□□ -1.01
RPRD1A-205ENST00000587563 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
RPRD1A-205ENST00000587563 SIK1P57059 783 aa8.74□□□□□ -1.01
RPRD1A-205ENST00000587563 AGGF1Q8N302 714 aaeCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms