RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 API5Q9BZZ5 524 aaKnown RBP21.42■■□□□ 1.02
VAT1-204ENST00000587147 PPEF1O14829 653 aaPredicted RBP21.41■■□□□ 1.02
VAT1-204ENST00000587147 LMNB1P20700 586 aa21.41■■□□□ 1.02
VAT1-204ENST00000587147 CASP7P55210 303 aa21.41■■□□□ 1.02
VAT1-204ENST00000587147 UBE3BQ7Z3V4 1068 aa21.41■■□□□ 1.02
VAT1-204ENST00000587147 BCL2L13Q9BXK5 485 aa21.41■■□□□ 1.02
VAT1-204ENST00000587147 TMX4Q9H1E5 349 aaPredicted RBP21.41■■□□□ 1.02
VAT1-204ENST00000587147 TAOK3Q9H2K8 898 aa21.41■■□□□ 1.02
VAT1-204ENST00000587147 NFKBIEO00221 500 aa21.4■■□□□ 1.02
VAT1-204ENST00000587147 IPO8O15397 1037 aaKnown RBP21.4■■□□□ 1.02
VAT1-204ENST00000587147 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
VAT1-204ENST00000587147 PSMD1Q99460 953 aa21.4■■□□□ 1.02
VAT1-204ENST00000587147 ATP6V0A2Q9Y487 856 aa21.4■■□□□ 1.02
VAT1-204ENST00000587147 LRRC37AA6NMS7 1700 aa21.4■■□□□ 1.02
VAT1-204ENST00000587147 DICER1Q9UPY3 1922 aaKnown RBP21.39■■□□□ 1.02
VAT1-204ENST00000587147 UTYO14607 1347 aa21.39■■□□□ 1.01
VAT1-204ENST00000587147 GRM8O00222 908 aa21.39■■□□□ 1.01
VAT1-204ENST00000587147 CTSWP56202 376 aa21.39■■□□□ 1.01
VAT1-204ENST00000587147 SLC4A10Q6U841 1118 aa21.39■■□□□ 1.01
VAT1-204ENST00000587147 CCT4P50991 539 aaKnown RBP21.38■■□□□ 1.01
VAT1-204ENST00000587147 FKBP4Q02790 459 aaKnown RBP eCLIP21.38■■□□□ 1.01
VAT1-204ENST00000587147 SP8Q8IXZ3 490 aa21.38■■□□□ 1.01
VAT1-204ENST00000587147 NOB1Q9ULX3 412 aaKnown RBP21.38■■□□□ 1.01
VAT1-204ENST00000587147 TTLL11Q8NHH1 800 aa21.37■■□□□ 1.01
VAT1-204ENST00000587147 VPS33BQ9H267 617 aa21.37■■□□□ 1.01
VAT1-204ENST00000587147 C9orf78Q9NZ63 289 aaPredicted RBP21.37■■□□□ 1.01
VAT1-204ENST00000587147 C9orf131Q5VYM1 1079 aa21.36■■□□□ 1.01
VAT1-204ENST00000587147 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
VAT1-204ENST00000587147 CSF1RP07333 972 aa21.35■■□□□ 1.01
VAT1-204ENST00000587147 RPS8P62241 208 aaKnown RBP21.35■■□□□ 1.01
VAT1-204ENST00000587147 RASSF7Q02833 373 aa21.35■■□□□ 1.01
VAT1-204ENST00000587147 CDC5LQ99459 802 aaKnown RBP21.35■■□□□ 1.01
VAT1-204ENST00000587147 ZNF219Q9P2Y4 722 aaPredicted RBP21.35■■□□□ 1.01
VAT1-204ENST00000587147 SUPT20HQ8NEM7 779 aa21.34■■□□□ 1.01
VAT1-204ENST00000587147 RNF181Q9P0P0 153 aa21.34■■□□□ 1.01
VAT1-204ENST00000587147 TIAM2Q8IVF5 1701 aa21.34■■□□□ 1.01
VAT1-204ENST00000587147 JARID2Q92833 1246 aaPredicted RBP21.33■■□□□ 1.01
VAT1-204ENST00000587147 CELF1Q92879 486 aaKnown RBP21.33■■□□□ 1.01
VAT1-204ENST00000587147 RTFDC1Q9BY42 306 aaPredicted RBP21.33■■□□□ 1.01
VAT1-204ENST00000587147 HDAC5Q9UQL6 1122 aa21.33■■□□□ 1.01
VAT1-204ENST00000587147 TAF1P21675 1872 aa21.32■■□□□ 1
VAT1-204ENST00000587147 ATF7IPQ6VMQ6 1270 aa21.32■■□□□ 1
VAT1-204ENST00000587147 BCAR3O75815 825 aa21.31■■□□□ 1
VAT1-204ENST00000587147 INTS3Q68E01 1043 aaKnown RBP21.31■■□□□ 1
VAT1-204ENST00000587147 ANKRD18AQ8IVF6 992 aa21.31■■□□□ 1
VAT1-204ENST00000587147 ZNF784Q8NCA9 323 aaPredicted RBP21.31■■□□□ 1
VAT1-204ENST00000587147 PRELPP51888 382 aa21.3■■□□□ 1
VAT1-204ENST00000587147 FOXO4P98177 505 aa21.3■■□□□ 1
VAT1-204ENST00000587147 ZKSCAN2Q63HK3 967 aa21.3■■□□□ 1
VAT1-204ENST00000587147 GREM2Q9H772 168 aa21.3■■□□□ 1
VAT1-204ENST00000587147 LTBP1Q14766 1721 aa21.29■■□□□ 1
VAT1-204ENST00000587147 IARSP41252 1262 aaKnown RBP21.29■■□□□ 1
VAT1-204ENST00000587147 OLFM4Q6UX06 510 aa21.29■■□□□ 1
VAT1-204ENST00000587147 DPP8Q6V1X1 898 aaPredicted RBP21.29■■□□□ 1
VAT1-204ENST00000587147 MPNDQ8N594 471 aa21.29■■□□□ 1
VAT1-204ENST00000587147 USP44Q9H0E7 712 aa21.29■■□□□ 1
VAT1-204ENST00000587147 SEC31BQ9NQW1 1179 aa21.29■■□□□ 1
VAT1-204ENST00000587147 BSDC1Q9NW68 430 aaPredicted RBP21.29■■□□□ 1
VAT1-204ENST00000587147 PODXL2Q9NZ53 605 aa21.29■■□□□ 1
VAT1-204ENST00000587147 NBPF7P0C2Y1 421 aaPredicted RBP21.28■■□□□ 1
VAT1-204ENST00000587147 TRIM27P14373 513 aa21.28■■□□□ 1
VAT1-204ENST00000587147 RABL6Q3YEC7 729 aaPredicted RBP21.28■■□□□ 1
VAT1-204ENST00000587147 COL4A1P02462 1669 aa21.28■■□□□ 1
VAT1-204ENST00000587147 ITGA6P23229 1130 aa21.27■■□□□ 1
VAT1-204ENST00000587147 IGHMBP2P38935 993 aaKnown RBP21.27■■□□□ 1
VAT1-204ENST00000587147 ANKRD18BA2A2Z9 1011 aa21.26■□□□□ 0.99
VAT1-204ENST00000587147 IFIT5Q13325 482 aaKnown RBP21.26■□□□□ 0.99
VAT1-204ENST00000587147 FAM161AQ3B820 660 aa21.26■□□□□ 0.99
VAT1-204ENST00000587147 FRAT1Q92837 279 aaPredicted RBP21.26■□□□□ 0.99
VAT1-204ENST00000587147 ZNF277Q9NRM2 450 aaPredicted RBP21.26■□□□□ 0.99
VAT1-204ENST00000587147 DUOX1Q9NRD9 1551 aa21.26■□□□□ 0.99
VAT1-204ENST00000587147 KDM2BQ8NHM5 1336 aa21.26■□□□□ 0.99
VAT1-204ENST00000587147 LMBR1LQ6UX01 489 aa21.25■□□□□ 0.99
VAT1-204ENST00000587147 JDP2Q8WYK2 163 aa21.25■□□□□ 0.99
VAT1-204ENST00000587147 KAZALD1Q96I82 304 aa21.25■□□□□ 0.99
VAT1-204ENST00000587147 SUCLG2Q96I99 432 aa21.25■□□□□ 0.99
VAT1-204ENST00000587147 CCDC85AQ96PX6 553 aaPredicted RBP21.25■□□□□ 0.99
VAT1-204ENST00000587147 MS4A1P11836 297 aa21.24■□□□□ 0.99
VAT1-204ENST00000587147 CCDC57Q2TAC2 916 aa21.24■□□□□ 0.99
VAT1-204ENST00000587147 DPY19L2Q6NUT2 758 aa21.24■□□□□ 0.99
VAT1-204ENST00000587147 XDHP47989 1333 aa21.24■□□□□ 0.99
VAT1-204ENST00000587147 GLTPD2A6NH11 291 aa21.23■□□□□ 0.99
VAT1-204ENST00000587147 GNAI3P08754 354 aa21.23■□□□□ 0.99
VAT1-204ENST00000587147 UBTFL1P0CB47 393 aaPredicted RBP21.23■□□□□ 0.99
VAT1-204ENST00000587147 KIAA2012Q0VF49 1180 aa21.23■□□□□ 0.99
VAT1-204ENST00000587147 EPHA10Q5JZY3 1008 aa21.23■□□□□ 0.99
VAT1-204ENST00000587147 EYA3Q99504 573 aa21.23■□□□□ 0.99
VAT1-204ENST00000587147 MPHOSPH8Q99549 860 aa21.23■□□□□ 0.99
VAT1-204ENST00000587147 GPBP1L1Q9HC44 474 aaPredicted RBP21.23■□□□□ 0.99
VAT1-204ENST00000587147 NSFL1CQ9UNZ2 370 aaKnown RBP21.23■□□□□ 0.99
VAT1-204ENST00000587147 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
VAT1-204ENST00000587147 FZD9O00144 591 aa21.22■□□□□ 0.99
VAT1-204ENST00000587147 ANKRD2Q9GZV1 360 aa21.22■□□□□ 0.99
VAT1-204ENST00000587147 BICC1Q9H694 974 aaKnown RBP21.22■□□□□ 0.99
VAT1-204ENST00000587147 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
VAT1-204ENST00000587147 MINPP1Q9UNW1 487 aa21.22■□□□□ 0.99
VAT1-204ENST00000587147 PPIP5K2O43314 1243 aa21.21■□□□□ 0.99
VAT1-204ENST00000587147 GPSM2P81274 684 aa21.21■□□□□ 0.99
VAT1-204ENST00000587147 LARGE2Q8N3Y3 721 aa21.21■□□□□ 0.99
VAT1-204ENST00000587147 ANKIB1Q9P2G1 1089 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms