RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 TOMM70O94826 608 aa28.42■■■□□ 2.14
DDX39A-205ENST00000586993 CC2D2BQ6DHV5 1058 aa28.42■■■□□ 2.14
DDX39A-205ENST00000586993 ATP6V0A2Q9Y487 856 aa28.42■■■□□ 2.14
DDX39A-205ENST00000586993 CDHR2Q9BYE9 1310 aa28.42■■■□□ 2.14
DDX39A-205ENST00000586993 MRPL50Q8N5N7 158 aaKnown RBP28.41■■■□□ 2.14
DDX39A-205ENST00000586993 LINS1Q8NG48 757 aa28.41■■■□□ 2.14
DDX39A-205ENST00000586993 COL4A5P29400 1685 aa28.41■■■□□ 2.14
DDX39A-205ENST00000586993 MYH3P11055 1940 aa28.41■■■□□ 2.14
DDX39A-205ENST00000586993 GCKRQ14397 625 aa28.4■■■□□ 2.14
DDX39A-205ENST00000586993 SSH1Q8WYL5 1049 aa28.4■■■□□ 2.14
DDX39A-205ENST00000586993 CELF1Q92879 486 aaKnown RBP28.4■■■□□ 2.14
DDX39A-205ENST00000586993 PSMD1Q99460 953 aa28.4■■■□□ 2.14
DDX39A-205ENST00000586993 BBOX1O75936 387 aa28.39■■■□□ 2.14
DDX39A-205ENST00000586993 H7C1W4 665 aa28.38■■■□□ 2.13
DDX39A-205ENST00000586993 PDE8AO60658 829 aa28.38■■■□□ 2.13
DDX39A-205ENST00000586993 BEND3Q5T5X7 828 aa28.38■■■□□ 2.13
DDX39A-205ENST00000586993 UBE3BQ7Z3V4 1068 aa28.38■■■□□ 2.13
DDX39A-205ENST00000586993 SEC31BQ9NQW1 1179 aa28.38■■■□□ 2.13
DDX39A-205ENST00000586993 KDM2BQ8NHM5 1336 aa28.38■■■□□ 2.13
DDX39A-205ENST00000586993 BCL2L13Q9BXK5 485 aa28.37■■■□□ 2.13
DDX39A-205ENST00000586993 DUOX1Q9NRD9 1551 aa28.37■■■□□ 2.13
DDX39A-205ENST00000586993 HSP90B1P14625 803 aaKnown RBP28.36■■■□□ 2.13
DDX39A-205ENST00000586993 IARSP41252 1262 aaKnown RBP28.36■■■□□ 2.13
DDX39A-205ENST00000586993 CASP7P55210 303 aa28.36■■■□□ 2.13
DDX39A-205ENST00000586993 HNRNPUQ00839 825 aaKnown RBP eCLIP28.36■■■□□ 2.13
DDX39A-205ENST00000586993 SP8Q8IXZ3 490 aa28.36■■■□□ 2.13
DDX39A-205ENST00000586993 CCDC85AQ96PX6 553 aaPredicted RBP28.36■■■□□ 2.13
DDX39A-205ENST00000586993 GLTPD2A6NH11 291 aa28.35■■■□□ 2.13
DDX39A-205ENST00000586993 CTSWP56202 376 aa28.34■■■□□ 2.13
DDX39A-205ENST00000586993 GRIPAP1Q4V328 841 aa28.34■■■□□ 2.13
DDX39A-205ENST00000586993 C16orf71Q8IYS4 520 aaPredicted RBP28.34■■■□□ 2.13
DDX39A-205ENST00000586993 LTBP1Q14766 1721 aa28.33■■■□□ 2.13
DDX39A-205ENST00000586993 CCDC152Q4G0S7 254 aa28.33■■■□□ 2.13
DDX39A-205ENST00000586993 TMC4Q7Z404 712 aa28.32■■■□□ 2.12
DDX39A-205ENST00000586993 RBM46Q8TBY0 533 aaKnown RBP28.32■■■□□ 2.12
DDX39A-205ENST00000586993 RRAGCQ9HB90 399 aa28.32■■■□□ 2.12
DDX39A-205ENST00000586993 APLP1P51693 650 aa28.31■■■□□ 2.12
DDX39A-205ENST00000586993 RPS8P62241 208 aaKnown RBP28.31■■■□□ 2.12
DDX39A-205ENST00000586993 ALDH1L2Q3SY69 923 aa28.31■■■□□ 2.12
DDX39A-205ENST00000586993 TTLL11Q8NHH1 800 aa28.31■■■□□ 2.12
DDX39A-205ENST00000586993 RTFDC1Q9BY42 306 aaPredicted RBP28.31■■■□□ 2.12
DDX39A-205ENST00000586993 ZNF541Q9H0D2 1346 aa28.31■■■□□ 2.12
DDX39A-205ENST00000586993 WDR90Q96KV7 1748 aa28.31■■■□□ 2.12
DDX39A-205ENST00000586993 SPEF2Q9C093 1822 aa28.3■■■□□ 2.12
DDX39A-205ENST00000586993 SLC4A10Q6U841 1118 aa28.3■■■□□ 2.12
DDX39A-205ENST00000586993 DPP8Q6V1X1 898 aaPredicted RBP28.3■■■□□ 2.12
DDX39A-205ENST00000586993 MPNDQ8N594 471 aa28.3■■■□□ 2.12
DDX39A-205ENST00000586993 TMX4Q9H1E5 349 aaPredicted RBP28.3■■■□□ 2.12
DDX39A-205ENST00000586993 CT47B1P0C2W7 299 aaPredicted RBP28.29■■■□□ 2.12
DDX39A-205ENST00000586993 PLA2G12BQ9BX93 195 aa28.29■■■□□ 2.12
DDX39A-205ENST00000586993 GREM2Q9H772 168 aa28.29■■■□□ 2.12
DDX39A-205ENST00000586993 SMC4Q9NTJ3 1288 aa28.29■■■□□ 2.12
DDX39A-205ENST00000586993 PTPRCP08575 1304 aa28.28■■■□□ 2.12
DDX39A-205ENST00000586993 DDNO94850 711 aaPredicted RBP28.28■■■□□ 2.12
DDX39A-205ENST00000586993 RTL9Q8NET4 1388 aa28.27■■■□□ 2.12
DDX39A-205ENST00000586993 POTECB2RU33 542 aa28.27■■■□□ 2.12
DDX39A-205ENST00000586993 FZD9O00144 591 aa28.27■■■□□ 2.12
DDX39A-205ENST00000586993 AOC3Q16853 763 aa28.27■■■□□ 2.12
DDX39A-205ENST00000586993 DPY19L2Q6NUT2 758 aa28.27■■■□□ 2.12
DDX39A-205ENST00000586993 LARGE2Q8N3Y3 721 aa28.27■■■□□ 2.12
DDX39A-205ENST00000586993 ALDH1L1O75891 902 aa28.26■■■□□ 2.11
DDX39A-205ENST00000586993 GPSM2P81274 684 aa28.26■■■□□ 2.11
DDX39A-205ENST00000586993 SRCIN1Q9C0H9 1055 aa28.26■■■□□ 2.11
DDX39A-205ENST00000586993 GRM8O00222 908 aa28.25■■■□□ 2.11
DDX39A-205ENST00000586993 PPIP5K2O43314 1243 aa28.25■■■□□ 2.11
DDX39A-205ENST00000586993 RARSP54136 660 aaKnown RBP28.24■■■□□ 2.11
DDX39A-205ENST00000586993 FSTL1Q12841 308 aa28.24■■■□□ 2.11
DDX39A-205ENST00000586993 FAM161AQ3B820 660 aa28.24■■■□□ 2.11
DDX39A-205ENST00000586993 SUPT20HQ8NEM7 779 aa28.24■■■□□ 2.11
DDX39A-205ENST00000586993 JDP2Q8WYK2 163 aa28.24■■■□□ 2.11
DDX39A-205ENST00000586993 NSFL1CQ9UNZ2 370 aaKnown RBP28.24■■■□□ 2.11
DDX39A-205ENST00000586993 CSF1RP07333 972 aa28.23■■■□□ 2.11
DDX39A-205ENST00000586993 FOXO4P98177 505 aa28.23■■■□□ 2.11
DDX39A-205ENST00000586993 ANKRD18AQ8IVF6 992 aa28.23■■■□□ 2.11
DDX39A-205ENST00000586993 KIAA2012Q0VF49 1180 aa28.22■■■□□ 2.11
DDX39A-205ENST00000586993 EPHA10Q5JZY3 1008 aa28.22■■■□□ 2.11
DDX39A-205ENST00000586993 POLLQ9UGP5 575 aa28.22■■■□□ 2.11
DDX39A-205ENST00000586993 VEGFAP15692 232 aaPredicted RBP28.21■■■□□ 2.11
DDX39A-205ENST00000586993 CDC5LQ99459 802 aaKnown RBP28.21■■■□□ 2.11
DDX39A-205ENST00000586993 ZBED9Q6R2W3 1325 aa28.2■■■□□ 2.11
DDX39A-205ENST00000586993 BRPF1P55201 1214 aaPredicted RBP28.2■■■□□ 2.1
DDX39A-205ENST00000586993 NIM1KQ8IY84 436 aa28.2■■■□□ 2.1
DDX39A-205ENST00000586993 L3MBTL3Q96JM7 780 aaPredicted RBP28.2■■■□□ 2.1
DDX39A-205ENST00000586993 GPR101Q96P66 508 aaPredicted RBP28.2■■■□□ 2.1
DDX39A-205ENST00000586993 VPS33BQ9H267 617 aa28.2■■■□□ 2.1
DDX39A-205ENST00000586993 C9orf78Q9NZ63 289 aaPredicted RBP28.2■■■□□ 2.1
DDX39A-205ENST00000586993 NOB1Q9ULX3 412 aaKnown RBP28.2■■■□□ 2.1
DDX39A-205ENST00000586993 ITGA6P23229 1130 aa28.19■■■□□ 2.1
DDX39A-205ENST00000586993 SCN4AP35499 1836 aa28.18■■■□□ 2.1
DDX39A-205ENST00000586993 NBPF7P0C2Y1 421 aaPredicted RBP28.18■■■□□ 2.1
DDX39A-205ENST00000586993 DNAJC5GQ8N7S2 189 aa28.18■■■□□ 2.1
DDX39A-205ENST00000586993 TBC1D16Q8TBP0 767 aa28.18■■■□□ 2.1
DDX39A-205ENST00000586993 PODXL2Q9NZ53 605 aa28.18■■■□□ 2.1
DDX39A-205ENST00000586993 UTYO14607 1347 aa28.18■■■□□ 2.1
DDX39A-205ENST00000586993 SMC1BQ8NDV3 1235 aa28.17■■■□□ 2.1
DDX39A-205ENST00000586993 KAZALD1Q96I82 304 aa28.17■■■□□ 2.1
DDX39A-205ENST00000586993 SUCLG2Q96I99 432 aa28.17■■■□□ 2.1
DDX39A-205ENST00000586993 C6orf229H3BNL8 230 aa28.16■■■□□ 2.1
DDX39A-205ENST00000586993 EIF6P56537 245 aaKnown RBP28.16■■■□□ 2.1
DDX39A-205ENST00000586993 GPC2Q8N158 579 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms