RNA–Protein interactions for RNA: ENST00000586539.5

ABCA8-208, Transcript of ATP binding cassette subfamily A member 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCA8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-208ENST00000586539 RBM26Q5T8P6 1007 aaKnown RBP12.85□□□□□ -0.35
ABCA8-208ENST00000586539 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 ZSCAN29Q8IWY8 852 aaPredicted RBP12.85□□□□□ -0.35
ABCA8-208ENST00000586539 RMDN2Q96LZ7 410 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 EMILIN1Q9Y6C2 1016 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
ABCA8-208ENST00000586539 PDE1CQ14123 709 aaPredicted RBP12.85□□□□□ -0.35
ABCA8-208ENST00000586539 NEDD9Q14511 834 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 CACNA2D3Q8IZS8 1091 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 A6NNZ2 444 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 PPP1R12BO60237 982 aaPredicted RBP12.85□□□□□ -0.35
ABCA8-208ENST00000586539 TUBB4BP68371 445 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 TUBB8Q3ZCM7 444 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.35
ABCA8-208ENST00000586539 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
ABCA8-208ENST00000586539 SYCE3A1L190 88 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 CCDC83Q8IWF9 413 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 CEP57L1Q8IYX8 460 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 ZNF513Q8N8E2 541 aaPredicted RBP12.84□□□□□ -0.35
ABCA8-208ENST00000586539 CTNNBL1Q8WYA6 563 aaPredicted RBP12.84□□□□□ -0.35
ABCA8-208ENST00000586539 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 ME1P48163 572 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 INF2Q27J81 1249 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 CWC27Q6UX04 472 aaKnown RBP12.84□□□□□ -0.35
ABCA8-208ENST00000586539 IL1RAPL2Q9NP60 686 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
ABCA8-208ENST00000586539 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 SH3GL3Q99963 347 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 RNF41Q9H4P4 317 aaPredicted RBP12.84□□□□□ -0.35
ABCA8-208ENST00000586539 OPA1O60313 960 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 PPP1R12CQ9BZL4 782 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
ABCA8-208ENST00000586539 ACEP12821 1306 aa12.83□□□□□ -0.35
ABCA8-208ENST00000586539 POLD1P28340 1107 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 BICDL1Q6ZP65 573 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 NGLY1Q96IV0 654 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 NCAPGQ9BPX3 1015 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 ADAMTS12P58397 1594 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 TUBBP07437 444 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 ZSCAN26Q16670 478 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 VCX3BQ9H321 246 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 VCX3AQ9NNX9 186 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 SHANK2Q9UPX8 1470 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 PPFIA2O75334 1257 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 GSDMDP57764 484 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
ABCA8-208ENST00000586539 ARMC9Q7Z3E5 817 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
ABCA8-208ENST00000586539 VPS18Q9P253 973 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.36
ABCA8-208ENST00000586539 CEBPAP49715 358 aaPredicted RBP12.83□□□□□ -0.36
ABCA8-208ENST00000586539 MAP3K7CLP57077 242 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 SNW1Q13573 536 aaKnown RBP12.83□□□□□ -0.36
ABCA8-208ENST00000586539 MORC4Q8TE76 937 aa12.83□□□□□ -0.36
ABCA8-208ENST00000586539 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
ABCA8-208ENST00000586539 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.36
ABCA8-208ENST00000586539 RIMS2Q9UQ26 1411 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
ABCA8-208ENST00000586539 CDC5LQ99459 802 aaKnown RBP12.82□□□□□ -0.36
ABCA8-208ENST00000586539 EPB41L2O43491 1005 aaKnown RBP12.82□□□□□ -0.36
ABCA8-208ENST00000586539 SREK1Q8WXA9 508 aaKnown RBP12.82□□□□□ -0.36
ABCA8-208ENST00000586539 TBC1D31Q96DN5 1066 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 KIAA0556O60303 1618 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 SMTNL1A8MU46 457 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 PPFIA3O75145 1194 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 LUC7L3O95232 432 aaKnown RBP12.82□□□□□ -0.36
ABCA8-208ENST00000586539 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
ABCA8-208ENST00000586539 STK3Q13188 491 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 MCM6Q14566 821 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 ARFGAP2Q8N6H7 521 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
ABCA8-208ENST00000586539 GBP5Q96PP8 586 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 SLC8A1P32418 973 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 PSMC4P43686 418 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 IRX1P78414 480 aaPredicted RBP12.82□□□□□ -0.36
ABCA8-208ENST00000586539 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
ABCA8-208ENST00000586539 MAP4K4O95819 1239 aaPredicted RBP12.81□□□□□ -0.36
ABCA8-208ENST00000586539 LDHCP07864 332 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 USP5P45974 858 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 TNIP1Q15025 636 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 SPECC1Q5M775 1068 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 SPATA32Q96LK8 384 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 LOC102724159A0A0B4J2E5 919 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 PWP2Q15269 919 aaKnown RBP12.81□□□□□ -0.36
ABCA8-208ENST00000586539 ZFYVE27Q5T4F4 411 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 MYRIPQ8NFW9 859 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 ANAPC4Q9UJX5 808 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 EXOC6BQ9Y2D4 811 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 MXRA7P84157 204 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 FLIIQ13045 1269 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 MPRIPQ6WCQ1 1025 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.81□□□□□ -0.364e-7■■■■■ 57.7
ABCA8-208ENST00000586539 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
ABCA8-208ENST00000586539 SEC63Q9UGP8 760 aaKnown RBP12.81□□□□□ -0.36
ABCA8-208ENST00000586539 USH1CQ9Y6N9 552 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms