RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 L3MBTL3Q96JM7 780 aaPredicted RBP24.01■■□□□ 1.43
ATG4D-203ENST00000585752 VPS33BQ9H267 617 aa24.01■■□□□ 1.43
ATG4D-203ENST00000585752 WDR63Q8IWG1 891 aa24■■□□□ 1.43
ATG4D-203ENST00000585752 CEP350Q5VT06 3117 aa24■■□□□ 1.43
ATG4D-203ENST00000585752 IRS4O14654 1257 aaPredicted RBP23.99■■□□□ 1.43
ATG4D-203ENST00000585752 TRIM28Q13263 835 aaKnown RBP23.99■■□□□ 1.43
ATG4D-203ENST00000585752 TWISTNBQ3B726 338 aaPredicted RBP23.99■■□□□ 1.43
ATG4D-203ENST00000585752 TAF1DQ9H5J8 278 aaPredicted RBP23.99■■□□□ 1.43
ATG4D-203ENST00000585752 IL16Q14005 1332 aa23.99■■□□□ 1.43
ATG4D-203ENST00000585752 HTRA3P83110 453 aa23.98■■□□□ 1.43
ATG4D-203ENST00000585752 NEXNQ0ZGT2 675 aa23.98■■□□□ 1.43
ATG4D-203ENST00000585752 PNMA8AQ86V59 439 aaPredicted RBP23.98■■□□□ 1.43
ATG4D-203ENST00000585752 LDHDQ86WU2 507 aa23.98■■□□□ 1.43
ATG4D-203ENST00000585752 CACNA1FO60840 1977 aa23.97■■□□□ 1.43
ATG4D-203ENST00000585752 EPHX2P34913 555 aa23.97■■□□□ 1.43
ATG4D-203ENST00000585752 TSPYL6Q8N831 410 aa23.97■■□□□ 1.43
ATG4D-203ENST00000585752 ZBTB38Q8NAP3 1195 aaPredicted RBP23.97■■□□□ 1.43
ATG4D-203ENST00000585752 CCDC191Q8NCU4 936 aa23.97■■□□□ 1.43
ATG4D-203ENST00000585752 CWC25Q9NXE8 425 aaPredicted RBP23.97■■□□□ 1.43
ATG4D-203ENST00000585752 SNED1Q8TER0 1413 aa23.96■■□□□ 1.43
ATG4D-203ENST00000585752 SF3B3Q15393 1217 aaKnown RBP23.96■■□□□ 1.43
ATG4D-203ENST00000585752 AOC3Q16853 763 aa23.96■■□□□ 1.43
ATG4D-203ENST00000585752 KLRG1Q96E93 195 aa23.96■■□□□ 1.43
ATG4D-203ENST00000585752 DNAJC5GQ8N7S2 189 aa23.95■■□□□ 1.42
ATG4D-203ENST00000585752 METTL22Q9BUU2 404 aaPredicted RBP23.95■■□□□ 1.42
ATG4D-203ENST00000585752 MAP3K2Q9Y2U5 619 aa23.95■■□□□ 1.42
ATG4D-203ENST00000585752 KSR2Q6VAB6 950 aa23.94■■□□□ 1.42
ATG4D-203ENST00000585752 MYH16Q9H6N6 1097 aa23.94■■□□□ 1.42
ATG4D-203ENST00000585752 SLC4A2P04920 1241 aa23.93■■□□□ 1.42
ATG4D-203ENST00000585752 ZNRF3Q9ULT6 936 aa23.93■■□□□ 1.42
ATG4D-203ENST00000585752 NSFL1CQ9UNZ2 370 aaKnown RBP23.93■■□□□ 1.42
ATG4D-203ENST00000585752 POTEIP0CG38 1075 aa23.92■■□□□ 1.42
ATG4D-203ENST00000585752 POTEJP0CG39 1038 aa23.92■■□□□ 1.42
ATG4D-203ENST00000585752 CCDC152Q4G0S7 254 aa23.92■■□□□ 1.42
ATG4D-203ENST00000585752 RTFDC1Q9BY42 306 aaPredicted RBP23.92■■□□□ 1.42
ATG4D-203ENST00000585752 PI4KAP2A4QPH2 592 aa23.91■■□□□ 1.42
ATG4D-203ENST00000585752 PDE8AO60658 829 aa23.91■■□□□ 1.42
ATG4D-203ENST00000585752 PCCAP05165 728 aaPredicted RBP23.91■■□□□ 1.42
ATG4D-203ENST00000585752 PI4KAP1Q8N8J0 262 aa23.91■■□□□ 1.42
ATG4D-203ENST00000585752 C6orf229H3BNL8 230 aa23.9■■□□□ 1.42
ATG4D-203ENST00000585752 RPS8P62241 208 aaKnown RBP23.9■■□□□ 1.42
ATG4D-203ENST00000585752 SLC51AQ86UW1 340 aa23.9■■□□□ 1.42
ATG4D-203ENST00000585752 CELF1Q92879 486 aaKnown RBP23.9■■□□□ 1.42
ATG4D-203ENST00000585752 EYA3Q99504 573 aa23.9■■□□□ 1.42
ATG4D-203ENST00000585752 MYH3P11055 1940 aa23.9■■□□□ 1.42
ATG4D-203ENST00000585752 TNIP1Q15025 636 aa23.89■■□□□ 1.41
ATG4D-203ENST00000585752 WASHC4Q2M389 1173 aa23.89■■□□□ 1.41
ATG4D-203ENST00000585752 BCL2L13Q9BXK5 485 aa23.89■■□□□ 1.41
ATG4D-203ENST00000585752 FANCIQ9NVI1 1328 aa23.88■■□□□ 1.41
ATG4D-203ENST00000585752 G3V3G9 751 aa23.88■■□□□ 1.41
ATG4D-203ENST00000585752 HNRNPUQ00839 825 aaKnown RBP eCLIP23.88■■□□□ 1.41
ATG4D-203ENST00000585752 KIAA2012Q0VF49 1180 aa23.88■■□□□ 1.41
ATG4D-203ENST00000585752 DCAF8Q5TAQ9 597 aa23.88■■□□□ 1.41
ATG4D-203ENST00000585752 COL4A5P29400 1685 aa23.88■■□□□ 1.41
ATG4D-203ENST00000585752 LRRC37AA6NMS7 1700 aa23.87■■□□□ 1.41
ATG4D-203ENST00000585752 FKBP5Q13451 457 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-203ENST00000585752 CIAPIN1Q6FI81 312 aa23.87■■□□□ 1.41
ATG4D-203ENST00000585752 JARID2Q92833 1246 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-203ENST00000585752 CREBZFQ9NS37 354 aa23.87■■□□□ 1.41
ATG4D-203ENST00000585752 CXCL9Q07325 125 aa23.86■■□□□ 1.41
ATG4D-203ENST00000585752 CCDC85AQ96PX6 553 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-203ENST00000585752 ANKIB1Q9P2G1 1089 aa23.86■■□□□ 1.41
ATG4D-203ENST00000585752 E9PSI1 815 aa23.85■■□□□ 1.41
ATG4D-203ENST00000585752 RIMBP2O15034 1052 aa23.85■■□□□ 1.41
ATG4D-203ENST00000585752 USP50Q70EL3 339 aaPredicted RBP23.85■■□□□ 1.41
ATG4D-203ENST00000585752 CNTROBQ8N137 903 aa23.85■■□□□ 1.41
ATG4D-203ENST00000585752 ZNF521Q96K83 1311 aa23.84■■□□□ 1.41
ATG4D-203ENST00000585752 CDHR2Q9BYE9 1310 aa23.84■■□□□ 1.41
ATG4D-203ENST00000585752 RAD17O75943 681 aa23.84■■□□□ 1.41
ATG4D-203ENST00000585752 EPS15P42566 896 aa23.84■■□□□ 1.41
ATG4D-203ENST00000585752 EXOSC9Q06265 439 aaKnown RBP23.84■■□□□ 1.41
ATG4D-203ENST00000585752 FLIIQ13045 1269 aa23.84■■□□□ 1.41
ATG4D-203ENST00000585752 MAP1SQ66K74 1059 aaPredicted RBP23.84■■□□□ 1.41
ATG4D-203ENST00000585752 ANKRD18AQ8IVF6 992 aa23.84■■□□□ 1.41
ATG4D-203ENST00000585752 TMEM88BA6NKF7 163 aa23.83■■□□□ 1.41
ATG4D-203ENST00000585752 SCNN1DP51172 638 aa23.83■■□□□ 1.41
ATG4D-203ENST00000585752 GPSM2P81274 684 aa23.83■■□□□ 1.41
ATG4D-203ENST00000585752 G2E3Q7L622 706 aa23.83■■□□□ 1.41
ATG4D-203ENST00000585752 CDC5LQ99459 802 aaKnown RBP23.83■■□□□ 1.41
ATG4D-203ENST00000585752 ZC3H12CQ9C0D7 883 aaKnown RBP23.83■■□□□ 1.41
ATG4D-203ENST00000585752 SEC31BQ9NQW1 1179 aa23.83■■□□□ 1.41
ATG4D-203ENST00000585752 ADARB2Q9NS39 739 aaKnown RBP23.83■■□□□ 1.41
ATG4D-203ENST00000585752 VAMP4O75379 141 aa23.82■■□□□ 1.4
ATG4D-203ENST00000585752 CWF19L2Q2TBE0 894 aaKnown RBP23.82■■□□□ 1.4
ATG4D-203ENST00000585752 JMYQ8N9B5 988 aa23.82■■□□□ 1.4
ATG4D-203ENST00000585752 GPRC5DQ9NZD1 345 aa23.82■■□□□ 1.4
ATG4D-203ENST00000585752 NEURL1BA8MQ27 555 aa23.81■■□□□ 1.4
ATG4D-203ENST00000585752 IGKV5-2P06315 115 aa23.81■■□□□ 1.4
ATG4D-203ENST00000585752 SPEF2Q9C093 1822 aa23.81■■□□□ 1.4
ATG4D-203ENST00000585752 PASKQ96RG2 1323 aa23.81■■□□□ 1.4
ATG4D-203ENST00000585752 ADAMTSL1Q8N6G6 1762 aa23.8■■□□□ 1.4
ATG4D-203ENST00000585752 GMPSP49915 693 aaPredicted RBP23.8■■□□□ 1.4
ATG4D-203ENST00000585752 DNAAF4Q8WXU2 420 aa23.8■■□□□ 1.4
ATG4D-203ENST00000585752 DBNDD1Q9H9R9 158 aa23.8■■□□□ 1.4
ATG4D-203ENST00000585752 SPINK5Q9NQ38 1064 aaPredicted RBP23.8■■□□□ 1.4
ATG4D-203ENST00000585752 POLLQ9UGP5 575 aa23.8■■□□□ 1.4
ATG4D-203ENST00000585752 MKRN1Q9UHC7 482 aaKnown RBP23.8■■□□□ 1.4
ATG4D-203ENST00000585752 GGA1Q9UJY5 639 aa23.8■■□□□ 1.4
ATG4D-203ENST00000585752 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
ATG4D-203ENST00000585752 H7C1D1 291 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms