RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 NFKBIEO00221 500 aa17.5■□□□□ 0.39
PRKCSH-202ENST00000585540 ARHGAP45Q92619 1136 aa17.5■□□□□ 0.39
PRKCSH-202ENST00000585540 API5Q9BZZ5 524 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-202ENST00000585540 SRCIN1Q9C0H9 1055 aa17.5■□□□□ 0.39
PRKCSH-202ENST00000585540 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
PRKCSH-202ENST00000585540 LRRC37AA6NMS7 1700 aa17.5■□□□□ 0.39
PRKCSH-202ENST00000585540 RARSP54136 660 aaKnown RBP17.49■□□□□ 0.39
PRKCSH-202ENST00000585540 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
PRKCSH-202ENST00000585540 SUPT20HQ8NEM7 779 aa17.49■□□□□ 0.39
PRKCSH-202ENST00000585540 UTRNP46939 3433 aa17.48■□□□□ 0.39
PRKCSH-202ENST00000585540 IPO8O15397 1037 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-202ENST00000585540 CTSWP56202 376 aa17.48■□□□□ 0.39
PRKCSH-202ENST00000585540 C9orf131Q5VYM1 1079 aa17.48■□□□□ 0.39
PRKCSH-202ENST00000585540 C3orf67Q6ZVT6 689 aa17.48■□□□□ 0.39
PRKCSH-202ENST00000585540 SP8Q8IXZ3 490 aa17.48■□□□□ 0.39
PRKCSH-202ENST00000585540 CDC5LQ99459 802 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-202ENST00000585540 RNF181Q9P0P0 153 aa17.48■□□□□ 0.39
PRKCSH-202ENST00000585540 F6X3S4 739 aa17.47■□□□□ 0.39
PRKCSH-202ENST00000585540 GRM8O00222 908 aa17.47■□□□□ 0.39
PRKCSH-202ENST00000585540 SYNE4Q8N205 404 aa17.47■□□□□ 0.39
PRKCSH-202ENST00000585540 HDAC5Q9UQL6 1122 aa17.47■□□□□ 0.39
PRKCSH-202ENST00000585540 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-202ENST00000585540 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
PRKCSH-202ENST00000585540 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-202ENST00000585540 CASP7P55210 303 aa17.46■□□□□ 0.39
PRKCSH-202ENST00000585540 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
PRKCSH-202ENST00000585540 ZNF784Q8NCA9 323 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-202ENST00000585540 UTYO14607 1347 aa17.46■□□□□ 0.38
PRKCSH-202ENST00000585540 RASSF7Q02833 373 aa17.45■□□□□ 0.38
PRKCSH-202ENST00000585540 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
PRKCSH-202ENST00000585540 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-202ENST00000585540 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
PRKCSH-202ENST00000585540 CCDC88AQ3V6T2 1871 aa17.44■□□□□ 0.38
PRKCSH-202ENST00000585540 RPS8P62241 208 aaKnown RBP17.44■□□□□ 0.38
PRKCSH-202ENST00000585540 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-202ENST00000585540 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
PRKCSH-202ENST00000585540 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-202ENST00000585540 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-202ENST00000585540 CSF1RP07333 972 aa17.43■□□□□ 0.38
PRKCSH-202ENST00000585540 ANKRD18AQ8IVF6 992 aa17.43■□□□□ 0.38
PRKCSH-202ENST00000585540 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
PRKCSH-202ENST00000585540 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
PRKCSH-202ENST00000585540 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
PRKCSH-202ENST00000585540 MPNDQ8N594 471 aa17.42■□□□□ 0.38
PRKCSH-202ENST00000585540 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
PRKCSH-202ENST00000585540 DPP8Q6V1X1 898 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-202ENST00000585540 JDP2Q8WYK2 163 aa17.41■□□□□ 0.38
PRKCSH-202ENST00000585540 CELF1Q92879 486 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-202ENST00000585540 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-202ENST00000585540 IGHMBP2P38935 993 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-202ENST00000585540 EYA3Q99504 573 aa17.4■□□□□ 0.38
PRKCSH-202ENST00000585540 BSDC1Q9NW68 430 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-202ENST00000585540 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
PRKCSH-202ENST00000585540 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
PRKCSH-202ENST00000585540 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
PRKCSH-202ENST00000585540 ATF7IPQ6VMQ6 1270 aa17.39■□□□□ 0.37
PRKCSH-202ENST00000585540 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
PRKCSH-202ENST00000585540 ITGA6P23229 1130 aa17.38■□□□□ 0.37
PRKCSH-202ENST00000585540 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-202ENST00000585540 GREM2Q9H772 168 aa17.38■□□□□ 0.37
PRKCSH-202ENST00000585540 XDHP47989 1333 aa17.38■□□□□ 0.37
PRKCSH-202ENST00000585540 MS4A1P11836 297 aa17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 PRELPP51888 382 aa17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 IFIT5Q13325 482 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 ZKSCAN2Q63HK3 967 aa17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 MPHOSPH8Q99549 860 aa17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 WDR90Q96KV7 1748 aa17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 TAF1P21675 1872 aa17.37■□□□□ 0.37
PRKCSH-202ENST00000585540 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 FZD9O00144 591 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 FOXO4P98177 505 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 CCDC57Q2TAC2 916 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 FAM161AQ3B820 660 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 RABL6Q3YEC7 729 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 NIM1KQ8IY84 436 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 LARGE2Q8N3Y3 721 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 ANKRD2Q9GZV1 360 aa17.36■□□□□ 0.37
PRKCSH-202ENST00000585540 GNAI3P08754 354 aa17.35■□□□□ 0.37
PRKCSH-202ENST00000585540 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-202ENST00000585540 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
PRKCSH-202ENST00000585540 GGA1Q9UJY5 639 aa17.35■□□□□ 0.37
PRKCSH-202ENST00000585540 NSFL1CQ9UNZ2 370 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-202ENST00000585540 BCAR3O75815 825 aa17.34■□□□□ 0.37
PRKCSH-202ENST00000585540 NBPF7P0C2Y1 421 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-202ENST00000585540 UBTFL1P0CB47 393 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-202ENST00000585540 TRIM27P14373 513 aa17.34■□□□□ 0.37
PRKCSH-202ENST00000585540 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
PRKCSH-202ENST00000585540 SUCLG2Q96I99 432 aa17.34■□□□□ 0.37
PRKCSH-202ENST00000585540 USP44Q9H0E7 712 aa17.34■□□□□ 0.37
PRKCSH-202ENST00000585540 IQCA1LA6NCM1 817 aa17.33■□□□□ 0.36
PRKCSH-202ENST00000585540 WASHC4Q2M389 1173 aa17.33■□□□□ 0.36
PRKCSH-202ENST00000585540 TAF7LQ5H9L4 462 aa17.33■□□□□ 0.36
PRKCSH-202ENST00000585540 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.36
PRKCSH-202ENST00000585540 CCDC85AQ96PX6 553 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms