RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 VPS33BQ9H267 617 aa18.71■□□□□ 0.59
CCDC57-214ENST00000582040 ATP5J2-PTCD1G3V325 749 aa18.7■□□□□ 0.58
CCDC57-214ENST00000582040 VEGFBP49765 207 aa18.7■□□□□ 0.58
CCDC57-214ENST00000582040 ANKRD13DQ6ZTN6 518 aa18.7■□□□□ 0.58
CCDC57-214ENST00000582040 ISCA1Q9BUE6 129 aa18.7■□□□□ 0.58
CCDC57-214ENST00000582040 ZNRF3Q9ULT6 936 aa18.7■□□□□ 0.58
CCDC57-214ENST00000582040 COL4A1P02462 1669 aa18.69■□□□□ 0.58
CCDC57-214ENST00000582040 CAPN15O75808 1086 aa18.69■□□□□ 0.58
CCDC57-214ENST00000582040 CXCL9Q07325 125 aa18.69■□□□□ 0.58
CCDC57-214ENST00000582040 KIAA2012Q0VF49 1180 aa18.69■□□□□ 0.58
CCDC57-214ENST00000582040 FAM89AQ96GI7 184 aa18.69■□□□□ 0.58
CCDC57-214ENST00000582040 HYPKQ9NX55 129 aa18.69■□□□□ 0.58
CCDC57-214ENST00000582040 RASSF10A6NK89 507 aa18.68■□□□□ 0.58
CCDC57-214ENST00000582040 APAF1O14727 1248 aa18.68■□□□□ 0.58
CCDC57-214ENST00000582040 FOXN1O15353 648 aa18.68■□□□□ 0.58
CCDC57-214ENST00000582040 ZNF853P0CG23 659 aa18.68■□□□□ 0.58
CCDC57-214ENST00000582040 USP50Q70EL3 339 aaPredicted RBP18.68■□□□□ 0.58
CCDC57-214ENST00000582040 GPRC5DQ9NZD1 345 aa18.68■□□□□ 0.58
CCDC57-214ENST00000582040 FMR1Q06787 632 aaKnown RBP eCLIP18.67■□□□□ 0.58
CCDC57-214ENST00000582040 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
CCDC57-214ENST00000582040 TMC4Q7Z404 712 aa18.67■□□□□ 0.58
CCDC57-214ENST00000582040 ADARB2Q9NS39 739 aaKnown RBP18.67■□□□□ 0.58
CCDC57-214ENST00000582040 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
CCDC57-214ENST00000582040 ABT1Q9ULW3 272 aaKnown RBP18.67■□□□□ 0.58
CCDC57-214ENST00000582040 RAD17O75943 681 aa18.66■□□□□ 0.58
CCDC57-214ENST00000582040 GMPSP49915 693 aaPredicted RBP18.66■□□□□ 0.58
CCDC57-214ENST00000582040 DEFB115Q30KQ5 88 aa18.66■□□□□ 0.58
CCDC57-214ENST00000582040 CIAPIN1Q6FI81 312 aa18.66■□□□□ 0.58
CCDC57-214ENST00000582040 CELF1Q92879 486 aaKnown RBP18.66■□□□□ 0.58
CCDC57-214ENST00000582040 TRPM7Q96QT4 1865 aa18.65■□□□□ 0.58
CCDC57-214ENST00000582040 THSD7BQ9C0I4 1608 aa18.65■□□□□ 0.58
CCDC57-214ENST00000582040 GNAI1P63096 354 aa18.65■□□□□ 0.58
CCDC57-214ENST00000582040 CALD1Q05682 793 aaKnown RBP18.65■□□□□ 0.58
CCDC57-214ENST00000582040 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
CCDC57-214ENST00000582040 SF3B3Q15393 1217 aaKnown RBP18.65■□□□□ 0.58
CCDC57-214ENST00000582040 AIDAQ96BJ3 306 aa18.65■□□□□ 0.58
CCDC57-214ENST00000582040 CDHR2Q9BYE9 1310 aa18.65■□□□□ 0.58
CCDC57-214ENST00000582040 TRAF5O00463 557 aa18.64■□□□□ 0.57
CCDC57-214ENST00000582040 ELL2O00472 640 aaPredicted RBP18.64■□□□□ 0.57
CCDC57-214ENST00000582040 IRS4O14654 1257 aaPredicted RBP18.64■□□□□ 0.57
CCDC57-214ENST00000582040 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.57
CCDC57-214ENST00000582040 PHAXQ9H814 394 aaKnown RBP18.64■□□□□ 0.57
CCDC57-214ENST00000582040 YDJCA8MPS7 323 aa18.63■□□□□ 0.57
CCDC57-214ENST00000582040 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
CCDC57-214ENST00000582040 TNIP1Q15025 636 aa18.63■□□□□ 0.57
CCDC57-214ENST00000582040 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
CCDC57-214ENST00000582040 NSFL1CQ9UNZ2 370 aaKnown RBP18.62■□□□□ 0.57
CCDC57-214ENST00000582040 WDR33Q9C0J8 1336 aaKnown RBP18.62■□□□□ 0.57
CCDC57-214ENST00000582040 CTCFP49711 727 aaPredicted RBP18.61■□□□□ 0.57
CCDC57-214ENST00000582040 PAXIP1Q6ZW49 1069 aaPredicted RBP18.61■□□□□ 0.57
CCDC57-214ENST00000582040 C8orf58Q8NAV2 365 aa18.61■□□□□ 0.57
CCDC57-214ENST00000582040 TRPM4Q8TD43 1214 aa18.61■□□□□ 0.57
CCDC57-214ENST00000582040 MYD88Q99836 296 aa18.61■□□□□ 0.57
CCDC57-214ENST00000582040 WBP1LQ9NX94 342 aa18.61■□□□□ 0.57
CCDC57-214ENST00000582040 SHTN1A0MZ66 631 aa18.6■□□□□ 0.57
CCDC57-214ENST00000582040 GPSM2P81274 684 aa18.6■□□□□ 0.57
CCDC57-214ENST00000582040 WASHC4Q2M389 1173 aa18.6■□□□□ 0.57
CCDC57-214ENST00000582040 ZBTB38Q8NAP3 1195 aaPredicted RBP18.6■□□□□ 0.57
CCDC57-214ENST00000582040 GLIS2Q9BZE0 524 aaPredicted RBP18.6■□□□□ 0.57
CCDC57-214ENST00000582040 DBNDD1Q9H9R9 158 aa18.6■□□□□ 0.57
CCDC57-214ENST00000582040 PRDM10Q9NQV6 1147 aa18.6■□□□□ 0.57
CCDC57-214ENST00000582040 C6orf229H3BNL8 230 aa18.59■□□□□ 0.57
CCDC57-214ENST00000582040 RIMBP2O15034 1052 aa18.59■□□□□ 0.57
CCDC57-214ENST00000582040 GRM1Q13255 1194 aa18.59■□□□□ 0.57
CCDC57-214ENST00000582040 CST9Q5W186 159 aa18.59■□□□□ 0.57
CCDC57-214ENST00000582040 CAPNS2Q96L46 248 aa18.59■□□□□ 0.57
CCDC57-214ENST00000582040 HIRAP54198 1017 aaPredicted RBP18.58■□□□□ 0.56
CCDC57-214ENST00000582040 CYP4F22Q6NT55 531 aa18.58■□□□□ 0.56
CCDC57-214ENST00000582040 GPR101Q96P66 508 aaPredicted RBP18.58■□□□□ 0.56
CCDC57-214ENST00000582040 SEC31BQ9NQW1 1179 aa18.58■□□□□ 0.56
CCDC57-214ENST00000582040 POLLQ9UGP5 575 aa18.58■□□□□ 0.56
CCDC57-214ENST00000582040 CNOT7Q9UIV1 285 aaKnown RBP18.58■□□□□ 0.56
CCDC57-214ENST00000582040 TLL2Q9Y6L7 1015 aa18.58■□□□□ 0.56
CCDC57-214ENST00000582040 PSMD14O00487 310 aa18.57■□□□□ 0.56
CCDC57-214ENST00000582040 CELF2O95319 508 aaKnown RBP18.57■□□□□ 0.56
CCDC57-214ENST00000582040 PCCAP05165 728 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-214ENST00000582040 ECE1P42892 770 aa18.57■□□□□ 0.56
CCDC57-214ENST00000582040 RPS8P62241 208 aaKnown RBP18.57■□□□□ 0.56
CCDC57-214ENST00000582040 MAP2K1Q02750 393 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-214ENST00000582040 MICALL2Q8IY33 904 aa18.57■□□□□ 0.56
CCDC57-214ENST00000582040 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
CCDC57-214ENST00000582040 EYA3Q99504 573 aa18.57■□□□□ 0.56
CCDC57-214ENST00000582040 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-214ENST00000582040 ECE2O60344 883 aa18.56■□□□□ 0.56
CCDC57-214ENST00000582040 DDX58O95786 925 aaKnown RBP18.56■□□□□ 0.56
CCDC57-214ENST00000582040 HSPA8P11142 646 aaKnown RBP18.56■□□□□ 0.56
CCDC57-214ENST00000582040 HSP90B1P14625 803 aaKnown RBP18.56■□□□□ 0.56
CCDC57-214ENST00000582040 LBX1P52954 281 aa18.56■□□□□ 0.56
CCDC57-214ENST00000582040 CCDC30Q5VVM6 783 aa18.56■□□□□ 0.56
CCDC57-214ENST00000582040 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
CCDC57-214ENST00000582040 TBC1D16Q8TBP0 767 aa18.56■□□□□ 0.56
CCDC57-214ENST00000582040 ZC3H15Q8WU90 426 aaKnown RBP18.56■□□□□ 0.56
CCDC57-214ENST00000582040 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
CCDC57-214ENST00000582040 METTL22Q9BUU2 404 aaPredicted RBP18.56■□□□□ 0.56
CCDC57-214ENST00000582040 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
CCDC57-214ENST00000582040 PGAP2Q9UHJ9 254 aa18.56■□□□□ 0.56
CCDC57-214ENST00000582040 RTL9Q8NET4 1388 aa18.55■□□□□ 0.56
CCDC57-214ENST00000582040 H7C1D1 291 aa18.55■□□□□ 0.56
CCDC57-214ENST00000582040 DOK7Q18PE1 504 aa18.55■□□□□ 0.56
CCDC57-214ENST00000582040 CCDC184Q52MB2 194 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms