RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 C21orf2O43822 256 aa11.08□□□□□ -0.64
CDK5RAP3-221ENST00000581662 CDHR5Q9HBB8 845 aa11.08□□□□□ -0.64
CDK5RAP3-221ENST00000581662 COL6A3P12111 3177 aa11.08□□□□□ -0.64
CDK5RAP3-221ENST00000581662 RNF123Q5XPI4 1314 aa11.08□□□□□ -0.64
CDK5RAP3-221ENST00000581662 CTU1Q7Z7A3 348 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-221ENST00000581662 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
CDK5RAP3-221ENST00000581662 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
CDK5RAP3-221ENST00000581662 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-221ENST00000581662 SAGE1Q9NXZ1 904 aa11.07□□□□□ -0.64
CDK5RAP3-221ENST00000581662 SMAPO00193 183 aa11.06□□□□□ -0.64
CDK5RAP3-221ENST00000581662 TRAF5O00463 557 aa11.06□□□□□ -0.64
CDK5RAP3-221ENST00000581662 NFIXQ14938 502 aa11.06□□□□□ -0.64
CDK5RAP3-221ENST00000581662 AFDNP55196 1824 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-221ENST00000581662 NCAPD2Q15021 1401 aa11.06□□□□□ -0.64
CDK5RAP3-221ENST00000581662 H0YIN7 160 aa11.05□□□□□ -0.64
CDK5RAP3-221ENST00000581662 AMPHP49418 695 aa11.05□□□□□ -0.64
CDK5RAP3-221ENST00000581662 NBPF26B4DH59 902 aa11.04□□□□□ -0.64
CDK5RAP3-221ENST00000581662 FBLN1P23142 703 aa11.04□□□□□ -0.64
CDK5RAP3-221ENST00000581662 MLLT3P42568 568 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-221ENST00000581662 CRKLP46109 303 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-221ENST00000581662 PNMA3Q9UL41 463 aa11.04□□□□□ -0.64
CDK5RAP3-221ENST00000581662 COL11A2P13942 1736 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-221ENST00000581662 NOGQ13253 232 aa11.03□□□□□ -0.64
CDK5RAP3-221ENST00000581662 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
CDK5RAP3-221ENST00000581662 TATDN2Q93075 761 aa11.03□□□□□ -0.64
CDK5RAP3-221ENST00000581662 FAM198AQ9UFP1 575 aa11.03□□□□□ -0.64
CDK5RAP3-221ENST00000581662 TRPM7Q96QT4 1865 aa11.03□□□□□ -0.64
CDK5RAP3-221ENST00000581662 RANBP2P49792 3224 aaKnown RBP11.02□□□□□ -0.64
CDK5RAP3-221ENST00000581662 SERPINB2P05120 415 aa11.02□□□□□ -0.65
CDK5RAP3-221ENST00000581662 A0A1W2PP64 1363 aa11.02□□□□□ -0.65
CDK5RAP3-221ENST00000581662 TSR3Q9UJK0 312 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-221ENST00000581662 ANKRD26Q9UPS8 1709 aa11.01□□□□□ -0.65
CDK5RAP3-221ENST00000581662 ANKRD31Q8N7Z5 1873 aa11□□□□□ -0.65
CDK5RAP3-221ENST00000581662 FZD9O00144 591 aa11□□□□□ -0.65
CDK5RAP3-221ENST00000581662 PKN2Q16513 984 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-221ENST00000581662 AKAP4Q5JQC9 854 aa11□□□□□ -0.65
CDK5RAP3-221ENST00000581662 NYAP1Q6ZVC0 841 aa11□□□□□ -0.65
CDK5RAP3-221ENST00000581662 NUDT18Q6ZVK8 323 aa11□□□□□ -0.65
CDK5RAP3-221ENST00000581662 GPC2Q8N158 579 aa11□□□□□ -0.65
CDK5RAP3-221ENST00000581662 ZNF622Q969S3 477 aaKnown RBP eCLIP11□□□□□ -0.652e-12■□□□□ 9.9
CDK5RAP3-221ENST00000581662 CELF2O95319 508 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 PHKG2P15735 406 aa10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 PPP4CP60510 307 aa10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 SOGA3Q5TF21 947 aa10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 INTS5Q6P9B9 1019 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 SAMD7Q7Z3H4 446 aa10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 RNF186Q9NXI6 227 aa10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 PDZRN3Q9UPQ7 1066 aa10.99□□□□□ -0.65
CDK5RAP3-221ENST00000581662 TJP1Q07157 1748 aa10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 HTTP42858 3142 aa10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 BCORQ6W2J9 1755 aa10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 SCN11AQ9UI33 1791 aa10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 FAM155AB1AL88 458 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 ZPR1O75312 459 aa10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 RRS1Q15050 365 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 PADI6Q6TGC4 694 aa10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 HDGFL2Q7Z4V5 671 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 C7orf43Q8WVR3 580 aa10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 RBM27Q9P2N5 1060 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 SPG7Q9UQ90 795 aa10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 SOS1Q07889 1333 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-221ENST00000581662 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 SCNN1DP51172 638 aa10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 BRIP1Q9BX63 1249 aa10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 NPDC1Q9NQX5 325 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 ZNF277Q9NRM2 450 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 TONSLQ96HA7 1378 aa10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 SLX4Q8IY92 1834 aa10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 CEP290O15078 2479 aa10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 BRCA2P51587 3418 aa10.97□□□□□ -0.65
CDK5RAP3-221ENST00000581662 KIF20BQ96Q89 1820 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 ARFGEF2Q9Y6D5 1785 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 RNF40O75150 1001 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 TRPA1O75762 1119 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 EPS15P42566 896 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 FKBP4Q02790 459 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 HSP90AB2PQ58FF8 381 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 BICDL1Q6ZP65 573 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 USP50Q70EL3 339 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 IFNL2Q8IZJ0 200 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 COG3Q96JB2 828 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 NARFQ9UHQ1 456 aa10.96□□□□□ -0.65
CDK5RAP3-221ENST00000581662 SEMA3EO15041 775 aa10.95□□□□□ -0.66
CDK5RAP3-221ENST00000581662 PDE6BP35913 854 aa10.95□□□□□ -0.66
CDK5RAP3-221ENST00000581662 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
CDK5RAP3-221ENST00000581662 CNKSR1Q969H4 720 aa10.95□□□□□ -0.66
CDK5RAP3-221ENST00000581662 L3MBTL2Q969R5 705 aa10.95□□□□□ -0.66
CDK5RAP3-221ENST00000581662 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
CDK5RAP3-221ENST00000581662 COL4A5P29400 1685 aa10.95□□□□□ -0.66
CDK5RAP3-221ENST00000581662 FLT4P35916 1363 aa10.94□□□□□ -0.66
CDK5RAP3-221ENST00000581662 ERVV-2B6SEH9 535 aa10.94□□□□□ -0.66
CDK5RAP3-221ENST00000581662 CCDC93Q567U6 631 aa10.94□□□□□ -0.66
CDK5RAP3-221ENST00000581662 SNED1Q8TER0 1413 aa10.93□□□□□ -0.66
CDK5RAP3-221ENST00000581662 COL15A1P39059 1388 aa10.93□□□□□ -0.66
CDK5RAP3-221ENST00000581662 KIF24Q5T7B8 1368 aa10.93□□□□□ -0.66
CDK5RAP3-221ENST00000581662 UNC80Q8N2C7 3258 aa10.93□□□□□ -0.66
CDK5RAP3-221ENST00000581662 SRGNP10124 158 aa10.93□□□□□ -0.66
CDK5RAP3-221ENST00000581662 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-221ENST00000581662 KIF23Q02241 960 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms