RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 PCDHGC3Q9UN70 934 aa10.79□□□□□ -0.68
SRSF1-203ENST00000581497 H3BM21 787 aa10.78□□□□□ -0.68
SRSF1-203ENST00000581497 TATP17735 454 aaPredicted RBP10.78□□□□□ -0.68
SRSF1-203ENST00000581497 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
SRSF1-203ENST00000581497 SYTL4Q96C24 671 aaPredicted RBP10.78□□□□□ -0.68
SRSF1-203ENST00000581497 FAM208AQ9UK61 1670 aaKnown RBP10.78□□□□□ -0.68
SRSF1-203ENST00000581497 HSPA5P11021 654 aaKnown RBP10.77□□□□□ -0.69
SRSF1-203ENST00000581497 USHBP1Q8N6Y0 703 aa10.77□□□□□ -0.69
SRSF1-203ENST00000581497 EMILIN1Q9Y6C2 1016 aa10.77□□□□□ -0.69
SRSF1-203ENST00000581497 NHSQ6T4R5 1651 aa10.76□□□□□ -0.69
SRSF1-203ENST00000581497 MEGF6O75095 1541 aa10.76□□□□□ -0.69
SRSF1-203ENST00000581497 PPM1GO15355 546 aaPredicted RBP10.76□□□□□ -0.69
SRSF1-203ENST00000581497 ZBTB7AO95365 584 aa10.76□□□□□ -0.69
SRSF1-203ENST00000581497 PTPRNQ16849 979 aa10.76□□□□□ -0.69
SRSF1-203ENST00000581497 SLC27A3Q5K4L6 730 aa10.76□□□□□ -0.69
SRSF1-203ENST00000581497 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
SRSF1-203ENST00000581497 ZFP42Q96MM3 310 aa10.76□□□□□ -0.69
SRSF1-203ENST00000581497 PDGFDQ9GZP0 370 aaPredicted RBP10.76□□□□□ -0.69
SRSF1-203ENST00000581497 UNC93B1Q9H1C4 597 aa10.76□□□□□ -0.69
SRSF1-203ENST00000581497 TLL2Q9Y6L7 1015 aa10.76□□□□□ -0.69
SRSF1-203ENST00000581497 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
SRSF1-203ENST00000581497 MTFR1LQ9H019 292 aa10.75□□□□□ -0.69
SRSF1-203ENST00000581497 LRRC4BQ9NT99 713 aa10.75□□□□□ -0.69
SRSF1-203ENST00000581497 ERBB4Q15303 1308 aa10.75□□□□□ -0.69
SRSF1-203ENST00000581497 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
SRSF1-203ENST00000581497 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
SRSF1-203ENST00000581497 EVA1BQ9NVM1 165 aa10.74□□□□□ -0.69
SRSF1-203ENST00000581497 WASHC2AQ641Q2 1341 aa10.74□□□□□ -0.69
SRSF1-203ENST00000581497 HMGB2P26583 209 aaKnown RBP10.73□□□□□ -0.69
SRSF1-203ENST00000581497 ZNF827Q17R98 1081 aa10.73□□□□□ -0.69
SRSF1-203ENST00000581497 BAP1Q92560 729 aa10.73□□□□□ -0.69
SRSF1-203ENST00000581497 PANK3Q9H999 370 aa10.73□□□□□ -0.69
SRSF1-203ENST00000581497 POLKQ9UBT6 870 aa10.73□□□□□ -0.69
SRSF1-203ENST00000581497 MYOM1P52179 1685 aa10.73□□□□□ -0.69
SRSF1-203ENST00000581497 KCNH2Q12809 1159 aa10.72□□□□□ -0.69
SRSF1-203ENST00000581497 SPG7Q9UQ90 795 aa10.72□□□□□ -0.69
SRSF1-203ENST00000581497 NSD2O96028 1365 aa10.72□□□□□ -0.69
SRSF1-203ENST00000581497 CYP27B1O15528 508 aa10.71□□□□□ -0.69
SRSF1-203ENST00000581497 VARSP26640 1264 aaKnown RBP10.71□□□□□ -0.69
SRSF1-203ENST00000581497 TNNT2P45379 298 aaPredicted RBP10.71□□□□□ -0.69
SRSF1-203ENST00000581497 NNTQ13423 1086 aa10.71□□□□□ -0.69
SRSF1-203ENST00000581497 CASZ1Q86V15 1759 aa10.71□□□□□ -0.69
SRSF1-203ENST00000581497 ZNF511Q8NB15 262 aa10.71□□□□□ -0.69
SRSF1-203ENST00000581497 KIF20BQ96Q89 1820 aa10.71□□□□□ -0.69
SRSF1-203ENST00000581497 TFCP2L1Q9NZI6 479 aa10.71□□□□□ -0.69
SRSF1-203ENST00000581497 CCNL1Q9UK58 526 aaPredicted RBP10.71□□□□□ -0.69
SRSF1-203ENST00000581497 BTAF1O14981 1849 aa10.7□□□□□ -0.7
SRSF1-203ENST00000581497 KCNQ4P56696 695 aa10.7□□□□□ -0.7
SRSF1-203ENST00000581497 MRPL14Q6P1L8 145 aaKnown RBP10.7□□□□□ -0.7
SRSF1-203ENST00000581497 MPNDQ8N594 471 aa10.7□□□□□ -0.7
SRSF1-203ENST00000581497 SPIRE2Q8WWL2 714 aa10.7□□□□□ -0.7
SRSF1-203ENST00000581497 NCAPD2Q15021 1401 aa10.69□□□□□ -0.7
SRSF1-203ENST00000581497 SCARF1Q14162 830 aa10.69□□□□□ -0.7
SRSF1-203ENST00000581497 MPRIPQ6WCQ1 1025 aa10.69□□□□□ -0.7
SRSF1-203ENST00000581497 PRR7Q8TB68 274 aa10.69□□□□□ -0.7
SRSF1-203ENST00000581497 ARXQ96QS3 562 aa10.69□□□□□ -0.7
SRSF1-203ENST00000581497 FHDC1Q9C0D6 1143 aaPredicted RBP10.69□□□□□ -0.7
SRSF1-203ENST00000581497 KNSTRNQ9Y448 316 aa10.69□□□□□ -0.7
SRSF1-203ENST00000581497 PAPPAQ13219 1627 aa10.69□□□□□ -0.7
SRSF1-203ENST00000581497 PNPLA7Q6ZV29 1317 aa10.68□□□□□ -0.7
SRSF1-203ENST00000581497 NDUFV2P19404 249 aa10.68□□□□□ -0.7
SRSF1-203ENST00000581497 POLD1P28340 1107 aa10.68□□□□□ -0.7
SRSF1-203ENST00000581497 SSTR3P32745 418 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-203ENST00000581497 EIF4A2Q14240 407 aaKnown RBP10.68□□□□□ -0.7
SRSF1-203ENST00000581497 MORC1Q86VD1 984 aa10.68□□□□□ -0.7
SRSF1-203ENST00000581497 SMARCC1Q92922 1105 aaPredicted RBP10.68□□□□□ -0.7
SRSF1-203ENST00000581497 SYT17Q9BSW7 474 aa10.68□□□□□ -0.7
SRSF1-203ENST00000581497 RGPD2P0DJD1 1756 aa10.67□□□□□ -0.7
SRSF1-203ENST00000581497 MOXD2PA6NHM9 499 aa10.67□□□□□ -0.7
SRSF1-203ENST00000581497 TIMP2P16035 220 aa10.67□□□□□ -0.7
SRSF1-203ENST00000581497 YY1P25490 414 aa10.67□□□□□ -0.7
SRSF1-203ENST00000581497 WDR4P57081 412 aaKnown RBP10.67□□□□□ -0.7
SRSF1-203ENST00000581497 IFNL2Q8IZJ0 200 aa10.67□□□□□ -0.7
SRSF1-203ENST00000581497 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
SRSF1-203ENST00000581497 PALLDQ8WX93 1383 aa10.66□□□□□ -0.7
SRSF1-203ENST00000581497 PLEKHG2Q9H7P9 1386 aa10.66□□□□□ -0.7
SRSF1-203ENST00000581497 ADH1CP00326 375 aa10.66□□□□□ -0.7
SRSF1-203ENST00000581497 MTMR2Q13614 643 aa10.66□□□□□ -0.7
SRSF1-203ENST00000581497 DESI1Q6ICB0 168 aa10.66□□□□□ -0.7
SRSF1-203ENST00000581497 PIGBQ92521 554 aa10.66□□□□□ -0.7
SRSF1-203ENST00000581497 DOT1LQ8TEK3 1739 aa10.66□□□□□ -0.7
SRSF1-203ENST00000581497 SHANK3Q9BYB0 1731 aa10.66□□□□□ -0.7
SRSF1-203ENST00000581497 KAT6BQ8WYB5 2073 aa10.65□□□□□ -0.7
SRSF1-203ENST00000581497 IGSF1Q8N6C5 1336 aa10.65□□□□□ -0.7
SRSF1-203ENST00000581497 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
SRSF1-203ENST00000581497 PHKG2P15735 406 aa10.65□□□□□ -0.7
SRSF1-203ENST00000581497 FLAD1Q8NFF5 587 aa10.65□□□□□ -0.7
SRSF1-203ENST00000581497 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.7
SRSF1-203ENST00000581497 MAP3K5Q99683 1374 aa10.65□□□□□ -0.71
SRSF1-203ENST00000581497 ANKRD26Q9UPS8 1709 aa10.64□□□□□ -0.71
SRSF1-203ENST00000581497 SOBPA7XYQ1 873 aa10.64□□□□□ -0.71
SRSF1-203ENST00000581497 PLEKHO1Q53GL0 409 aaPredicted RBP10.64□□□□□ -0.71
SRSF1-203ENST00000581497 COL23A1Q86Y22 540 aaPredicted RBP10.64□□□□□ -0.71
SRSF1-203ENST00000581497 KIF7Q2M1P5 1343 aa10.63□□□□□ -0.71
SRSF1-203ENST00000581497 HSP90AB1P08238 724 aaKnown RBP10.63□□□□□ -0.71
SRSF1-203ENST00000581497 VSIG8P0DPA2 414 aa10.63□□□□□ -0.71
SRSF1-203ENST00000581497 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
SRSF1-203ENST00000581497 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
SRSF1-203ENST00000581497 AK7Q96M32 723 aa10.63□□□□□ -0.71
SRSF1-203ENST00000581497 KLF16Q9BXK1 252 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms