RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 POTEB2H3BUK9 544 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 ZSCAN12O43309 604 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 GMNNO75496 209 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 ZBTB9Q96C00 473 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 PFDN4Q9NQP4 134 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 PPME1Q9Y570 386 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 ARHGEF12Q9NZN5 1544 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 NUTM2BA6NNL0 878 aaPredicted RBP8.51□□□□□ -1.05
CMTM4-205ENST00000581487 SMTNL1A8MU46 457 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 NUTM2EB1AL46 878 aaPredicted RBP8.51□□□□□ -1.05
CMTM4-205ENST00000581487 UBE2HP62256 183 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 CDR2Q01850 454 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 TTC39AQ5SRH9 613 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 NUTM2AQ8IVF1 878 aaPredicted RBP8.51□□□□□ -1.05
CMTM4-205ENST00000581487 MEIS3Q99687 375 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 ANO10Q9NW15 660 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 DACH1Q9UI36 760 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 CEP83Q9Y592 693 aa8.51□□□□□ -1.05
CMTM4-205ENST00000581487 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
CMTM4-205ENST00000581487 STMN1P16949 149 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 PIP4K2AP48426 406 aaPredicted RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 SMC1BQ8NDV3 1235 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 VPS18Q9P253 973 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 HMGB3O15347 200 aaKnown RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 RFC1P35251 1148 aaPredicted RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 SNW1Q13573 536 aaKnown RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 TAF7Q15545 349 aaPredicted RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 KIF4BQ2VIQ3 1234 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 ARHGAP29Q52LW3 1261 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 TRIM22Q8IYM9 498 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 HYPKQ9NX55 129 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 ZSCAN22P10073 491 aaPredicted RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 PPP1R14CQ8TAE6 165 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 ZSCAN32Q9NX65 697 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 BTBD11A6QL63 1104 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 U2AF2P26368 475 aaKnown RBP eCLIP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 C16orf71Q8IYS4 520 aaPredicted RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 KIF14Q15058 1648 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 IDI1Q13907 227 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 TTLL12Q14166 644 aaPredicted RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 PRR16Q569H4 304 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 ESCO1Q5FWF5 840 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 CCDC110Q8TBZ0 833 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 DCTPP1Q9H773 170 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 KIF5BP33176 963 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 AP1ARQ63HQ0 302 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 C8orf58Q8NAV2 365 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 ZNF397Q8NF99 534 aaPredicted RBP8.5□□□□□ -1.05
CMTM4-205ENST00000581487 ECHDC1Q9NTX5 307 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 CTNNA3Q9UI47 895 aa8.5□□□□□ -1.05
CMTM4-205ENST00000581487 GSTTP1A0A1W2PQM5 241 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 NEMFO60524 1076 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 ZNF853P0CG23 659 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 USP48Q86UV5 1035 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 ZGPATQ8N5A5 531 aaKnown RBP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 ESYT1Q9BSJ8 1104 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 IQCGQ9H095 443 aaKnown RBP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 BOLA2Q9H3K6 86 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 BLMP54132 1417 aaPredicted RBP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 SPATA31E1Q6ZUB1 1445 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 FBLN1P23142 703 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 NAA16Q6N069 864 aaPredicted RBP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 SEPT14Q6ZU15 432 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 CTNNBL1Q8WYA6 563 aaPredicted RBP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 VTI1AQ96AJ9 217 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 GOPCQ9HD26 462 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 WASLO00401 505 aaPredicted RBP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 MYL6BP14649 208 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 CTNNA2P26232 953 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 GIMAP6Q6P9H5 292 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 GTF3C6Q969F1 213 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 IFFO1Q0D2I5 559 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 CFAP100Q494V2 611 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 CNPY2Q9Y2B0 182 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 GCOM1H8Y6P7 765 aaPredicted RBP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 VAMP4O75379 141 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 MYZAPP0CAP1 466 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 RBM5P52756 815 aaKnown RBP eCLIP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 TSPYL6Q8N831 410 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 ALS2CR12Q96Q35 445 aa8.49□□□□□ -1.05
CMTM4-205ENST00000581487 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.49□□□□□ -1.05
CMTM4-205ENST00000581487 BICDL2A1A5D9 508 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 CNPY4Q8N129 248 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
CMTM4-205ENST00000581487 NPC1L1Q9UHC9 1359 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 RNF8O76064 485 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 ZNF165P49910 485 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 MCM6Q14566 821 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 SLC9A5Q14940 896 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 LARP1Q6PKG0 1096 aaKnown RBP8.48□□□□□ -1.05
CMTM4-205ENST00000581487 CCDC117Q8IWD4 279 aaPredicted RBP8.48□□□□□ -1.05
CMTM4-205ENST00000581487 MGEA5O60502 916 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 CDKL5O76039 1030 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 SSBP05455 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
CMTM4-205ENST00000581487 SPECC1LQ69YQ0 1117 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 TATP17735 454 aaPredicted RBP8.48□□□□□ -1.05
CMTM4-205ENST00000581487 CCDC50Q8IVM0 306 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 PLEKHM2Q8IWE5 1019 aa8.48□□□□□ -1.05
CMTM4-205ENST00000581487 ARFGAP3Q9NP61 516 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms