RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 CDK11BP21127 795 aaKnown RBP9.08□□□□□ -0.96
TVP23C-208ENST00000581273 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
TVP23C-208ENST00000581273 RABEP1Q15276 862 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 FTSJ3Q8IY81 847 aaKnown RBP9.08□□□□□ -0.96
TVP23C-208ENST00000581273 PIGBQ92521 554 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 PUS7Q96PZ0 661 aaKnown RBP9.08□□□□□ -0.96
TVP23C-208ENST00000581273 RTL1A6NKG5 1358 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 GNPATO15228 680 aa9.07□□□□□ -0.96
TVP23C-208ENST00000581273 GALR2O43603 387 aaPredicted RBP9.07□□□□□ -0.96
TVP23C-208ENST00000581273 BAG4O95429 457 aaKnown RBP9.07□□□□□ -0.96
TVP23C-208ENST00000581273 HMGB2P26583 209 aaKnown RBP9.07□□□□□ -0.96
TVP23C-208ENST00000581273 DNTTIP2Q5QJE6 756 aaKnown RBP9.07□□□□□ -0.96
TVP23C-208ENST00000581273 LINC00116Q8NCU8 138 aa9.07□□□□□ -0.96
TVP23C-208ENST00000581273 PANK1Q8TE04 598 aa9.07□□□□□ -0.96
TVP23C-208ENST00000581273 KIF3AQ9Y496 699 aa9.07□□□□□ -0.96
TVP23C-208ENST00000581273 WDR33Q9C0J8 1336 aaKnown RBP9.06□□□□□ -0.96
TVP23C-208ENST00000581273 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 TTLL13PA6NNM8 815 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 IPO8O15397 1037 aaKnown RBP9.06□□□□□ -0.96
TVP23C-208ENST00000581273 MMP10P09238 476 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 ZSCAN20P17040 1043 aaPredicted RBP9.06□□□□□ -0.96
TVP23C-208ENST00000581273 SIK1P57059 783 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 TGFB2P61812 414 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 RASSF7Q02833 373 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 GABPB1Q06547 395 aaPredicted RBP9.06□□□□□ -0.96
TVP23C-208ENST00000581273 BMP2KLQ5H9B9 411 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 TAF7LQ5H9L4 462 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 DZIP1LQ8IYY4 767 aaKnown RBP9.06□□□□□ -0.96
TVP23C-208ENST00000581273 IPO4Q8TEX9 1081 aaKnown RBP9.06□□□□□ -0.96
TVP23C-208ENST00000581273 RUNDC1Q96C34 613 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 TMOD3Q9NYL9 352 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 ASAP1Q9ULH1 1129 aa9.06□□□□□ -0.96
TVP23C-208ENST00000581273 MAP2P11137 1827 aaKnown RBP9.05□□□□□ -0.96
TVP23C-208ENST00000581273 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 ATP6V1AP38606 617 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 ITPK1Q13572 414 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 SYCP1Q15431 976 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 DEFB115Q30KQ5 88 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 ZSCAN23Q3MJ62 389 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 LRSAM1Q6UWE0 723 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 WWC1Q8IX03 1113 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 MPNDQ8N594 471 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 CFAP53Q96M91 514 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 BMP2KQ9NSY1 1161 aaPredicted RBP9.05□□□□□ -0.96
TVP23C-208ENST00000581273 SPG7Q9UQ90 795 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 EMILIN1Q9Y6C2 1016 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 NSD3Q9BZ95 1437 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 PASKQ96RG2 1323 aa9.05□□□□□ -0.96
TVP23C-208ENST00000581273 FLT4P35916 1363 aa9.04□□□□□ -0.96
TVP23C-208ENST00000581273 PDIA4P13667 645 aaKnown RBP9.04□□□□□ -0.96
TVP23C-208ENST00000581273 SSFA2P28290 1259 aa9.04□□□□□ -0.96
TVP23C-208ENST00000581273 POTEHQ6S545 545 aa9.04□□□□□ -0.96
TVP23C-208ENST00000581273 DCAF5Q96JK2 942 aa9.04□□□□□ -0.96
TVP23C-208ENST00000581273 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
TVP23C-208ENST00000581273 CCDC88AQ3V6T2 1871 aa9.04□□□□□ -0.96
TVP23C-208ENST00000581273 KCNA3P22001 575 aa9.03□□□□□ -0.96
TVP23C-208ENST00000581273 SLC20A2Q08357 652 aa9.03□□□□□ -0.96
TVP23C-208ENST00000581273 CASC1Q6TDU7 716 aa9.03□□□□□ -0.96
TVP23C-208ENST00000581273 PIBF1Q8WXW3 757 aa9.03□□□□□ -0.96
TVP23C-208ENST00000581273 ZNF428Q96B54 188 aa9.03□□□□□ -0.96
TVP23C-208ENST00000581273 LTBP1Q14766 1721 aa9.02□□□□□ -0.96
TVP23C-208ENST00000581273 RASSF10A6NK89 507 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 GOLGA6L6A8MZA4 724 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 ST18O60284 1047 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 PPP1R37O75864 691 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 MCM2P49736 904 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 NUCB1Q02818 461 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 GRM1Q13255 1194 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 TRAPPC3LQ5T215 181 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 CAVIN1Q6NZI2 390 aaKnown RBP9.02□□□□□ -0.97
TVP23C-208ENST00000581273 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 MS4A4AQ96JQ5 239 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 TSPY26PQ9H489 355 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 ATG3Q9NT62 314 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 OGFRQ9NZT2 677 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 ZHX1Q9UKY1 873 aaPredicted RBP9.02□□□□□ -0.97
TVP23C-208ENST00000581273 TIAM2Q8IVF5 1701 aa9.02□□□□□ -0.97
TVP23C-208ENST00000581273 CDC45O75419 566 aa9.01□□□□□ -0.97
TVP23C-208ENST00000581273 DALRD3Q5D0E6 543 aaKnown RBP9.01□□□□□ -0.97
TVP23C-208ENST00000581273 EYA1Q99502 592 aa9.01□□□□□ -0.97
TVP23C-208ENST00000581273 DNAJC2Q99543 621 aaKnown RBP9.01□□□□□ -0.97
TVP23C-208ENST00000581273 RTCBQ9Y3I0 505 aaKnown RBP9.01□□□□□ -0.97
TVP23C-208ENST00000581273 COL6A3P12111 3177 aa9.01□□□□□ -0.97
TVP23C-208ENST00000581273 ADAMTS7Q9UKP4 1686 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 PHKG2P15735 406 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 RFC4P35249 363 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 MCTP1Q6DN14 999 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 CCDC146Q8IYE0 955 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 IFNL2Q8IZJ0 200 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 NLGN1Q8N2Q7 840 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 CARD14Q9BXL6 1004 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 RBSNQ9H1K0 784 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 LMBRD1Q9NUN5 540 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 CCDC87Q9NVE4 849 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 PIM2Q9P1W9 311 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 NAP1L2Q9ULW6 460 aaPredicted RBP9□□□□□ -0.97
TVP23C-208ENST00000581273 PARP3Q9Y6F1 533 aa9□□□□□ -0.97
TVP23C-208ENST00000581273 MYH14Q7Z406 1995 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms