RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PTGER2P43116 358 aa13.1□□□□□ -0.31
CCDC47-203ENST00000580986 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
CCDC47-203ENST00000580986 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
CCDC47-203ENST00000580986 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
CCDC47-203ENST00000580986 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
CCDC47-203ENST00000580986 ZBTB7BO15156 539 aaPredicted RBP13.09□□□□□ -0.31
CCDC47-203ENST00000580986 ST5P78524 1137 aa13.09□□□□□ -0.31
CCDC47-203ENST00000580986 MSL1Q68DK7 614 aa13.09□□□□□ -0.31
CCDC47-203ENST00000580986 PRR5LQ6MZQ0 368 aa13.09□□□□□ -0.31
CCDC47-203ENST00000580986 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
CCDC47-203ENST00000580986 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
CCDC47-203ENST00000580986 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
CCDC47-203ENST00000580986 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
CCDC47-203ENST00000580986 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
CCDC47-203ENST00000580986 BRIP1Q9BX63 1249 aa13.08□□□□□ -0.32
CCDC47-203ENST00000580986 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
CCDC47-203ENST00000580986 ABCC12Q96J65 1359 aa13.07□□□□□ -0.32
CCDC47-203ENST00000580986 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
CCDC47-203ENST00000580986 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
CCDC47-203ENST00000580986 UBTFL1P0CB47 393 aaPredicted RBP13.07□□□□□ -0.32
CCDC47-203ENST00000580986 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
CCDC47-203ENST00000580986 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
CCDC47-203ENST00000580986 MEIS3Q99687 375 aa13.07□□□□□ -0.32
CCDC47-203ENST00000580986 ZBTB40Q9NUA8 1239 aa13.07□□□□□ -0.32
CCDC47-203ENST00000580986 COG6Q9Y2V7 657 aa13.07□□□□□ -0.32
CCDC47-203ENST00000580986 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
CCDC47-203ENST00000580986 KIAA1551Q9HCM1 1747 aa13.06□□□□□ -0.32
CCDC47-203ENST00000580986 IRS4O14654 1257 aaPredicted RBP13.06□□□□□ -0.32
CCDC47-203ENST00000580986 PDE8AO60658 829 aa13.06□□□□□ -0.32
CCDC47-203ENST00000580986 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
CCDC47-203ENST00000580986 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
CCDC47-203ENST00000580986 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
CCDC47-203ENST00000580986 CRY2Q49AN0 593 aa13.06□□□□□ -0.32
CCDC47-203ENST00000580986 ERFEQ4G0M1 354 aa13.06□□□□□ -0.32
CCDC47-203ENST00000580986 CD2APQ9Y5K6 639 aa13.06□□□□□ -0.32
CCDC47-203ENST00000580986 NPHP1O15259 732 aa13.05□□□□□ -0.32
CCDC47-203ENST00000580986 GNAI2P04899 355 aa13.05□□□□□ -0.32
CCDC47-203ENST00000580986 PDE6BP35913 854 aa13.05□□□□□ -0.32
CCDC47-203ENST00000580986 MTX1Q13505 466 aa13.05□□□□□ -0.32
CCDC47-203ENST00000580986 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
CCDC47-203ENST00000580986 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
CCDC47-203ENST00000580986 CSF1RP07333 972 aa13.04□□□□□ -0.32
CCDC47-203ENST00000580986 CTSWP56202 376 aa13.04□□□□□ -0.32
CCDC47-203ENST00000580986 TGFB2P61812 414 aa13.04□□□□□ -0.32
CCDC47-203ENST00000580986 KAZALD1Q96I82 304 aa13.04□□□□□ -0.32
CCDC47-203ENST00000580986 COL11A2P13942 1736 aaPredicted RBP13.04□□□□□ -0.32
CCDC47-203ENST00000580986 FAM177BA6PVY3 158 aa13.03□□□□□ -0.32
CCDC47-203ENST00000580986 FOXO4P98177 505 aa13.03□□□□□ -0.32
CCDC47-203ENST00000580986 SUCLG2Q96I99 432 aa13.03□□□□□ -0.32
CCDC47-203ENST00000580986 BRCA1P38398 1863 aaKnown RBP13.02□□□□□ -0.32
CCDC47-203ENST00000580986 HOXA10P31260 410 aaPredicted RBP13.02□□□□□ -0.33
CCDC47-203ENST00000580986 CCDC152Q4G0S7 254 aa13.02□□□□□ -0.33
CCDC47-203ENST00000580986 ERICH6BQ5W0A0 696 aa13.02□□□□□ -0.33
CCDC47-203ENST00000580986 SYNE4Q8N205 404 aa13.02□□□□□ -0.33
CCDC47-203ENST00000580986 TTLL11Q8NHH1 800 aa13.02□□□□□ -0.33
CCDC47-203ENST00000580986 CRBNQ96SW2 442 aa13.02□□□□□ -0.33
CCDC47-203ENST00000580986 BICC1Q9H694 974 aaKnown RBP13.02□□□□□ -0.33
CCDC47-203ENST00000580986 SRGNP10124 158 aa13.01□□□□□ -0.33
CCDC47-203ENST00000580986 HCLS1P14317 486 aaPredicted RBP13.01□□□□□ -0.33
CCDC47-203ENST00000580986 RPAP2Q8IXW5 612 aaPredicted RBP13.01□□□□□ -0.33
CCDC47-203ENST00000580986 LRRFIP2Q9Y608 721 aaKnown RBP13.01□□□□□ -0.33
CCDC47-203ENST00000580986 NEFLP07196 543 aa13□□□□□ -0.33
CCDC47-203ENST00000580986 NPR1P16066 1061 aa13□□□□□ -0.33
CCDC47-203ENST00000580986 RTL5Q5HYW3 569 aaPredicted RBP13□□□□□ -0.33
CCDC47-203ENST00000580986 STYK1Q6J9G0 422 aa13□□□□□ -0.33
CCDC47-203ENST00000580986 ANKRD44Q8N8A2 993 aa13□□□□□ -0.33
CCDC47-203ENST00000580986 MASTLQ96GX5 879 aa13□□□□□ -0.33
CCDC47-203ENST00000580986 CRAMP1Q96RY5 1269 aa13□□□□□ -0.33
CCDC47-203ENST00000580986 H0YIN7 160 aa12.99□□□□□ -0.33
CCDC47-203ENST00000580986 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
CCDC47-203ENST00000580986 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
CCDC47-203ENST00000580986 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
CCDC47-203ENST00000580986 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
CCDC47-203ENST00000580986 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
CCDC47-203ENST00000580986 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
CCDC47-203ENST00000580986 CEP85Q6P2H3 762 aa12.98□□□□□ -0.33
CCDC47-203ENST00000580986 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
CCDC47-203ENST00000580986 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
CCDC47-203ENST00000580986 JARID2Q92833 1246 aaPredicted RBP12.98□□□□□ -0.33
CCDC47-203ENST00000580986 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
CCDC47-203ENST00000580986 CDC5LQ99459 802 aaKnown RBP12.98□□□□□ -0.33
CCDC47-203ENST00000580986 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
CCDC47-203ENST00000580986 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 HMMRO75330 724 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 KCNA3P22001 575 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 ITGA6P23229 1130 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 ATP8B2P98198 1209 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
CCDC47-203ENST00000580986 CCDC57Q2TAC2 916 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
CCDC47-203ENST00000580986 C2CD5Q86YS7 1000 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 CCDC24Q8N4L8 307 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 EXOC6Q8TAG9 804 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 MS4A3Q96HJ5 214 aa12.97□□□□□ -0.33
CCDC47-203ENST00000580986 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
CCDC47-203ENST00000580986 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
CCDC47-203ENST00000580986 GREM2Q9H772 168 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms