RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 NBPF5PQ86XG9 351 aaPredicted RBP7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PI4K2BQ8TCG2 481 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PDGFDQ9GZP0 370 aaPredicted RBP7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 TFCP2L1Q9NZI6 479 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ZBTB47Q9UFB7 747 aaPredicted RBP7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 HDAC5Q9UQL6 1122 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 COL4A1P02462 1669 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RIC1Q4ADV7 1423 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 BRWD3Q6RI45 1802 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 CARMIL3Q8ND23 1372 aa7.59□□□□□ -1.2
RNU4ATAC-201ENST00000580972 WTIPA6NIX2 430 aaPredicted RBP7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 EYA2O00167 538 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SDSP20132 328 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SSFA2P28290 1259 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 ADORA1P30542 326 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 IFIT5Q13325 482 aaKnown RBP7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CCDC57Q2TAC2 916 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TNNI3KQ59H18 835 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 HELBQ8NG08 1087 aaPredicted RBP7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 DBNDD2Q9BQY9 259 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 STAP2Q9UGK3 403 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 DBNLQ9UJU6 430 aaKnown RBP7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 NDUFB9Q9Y6M9 179 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 FPGT-TNNI3KV9GXZ4 949 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 C4BP0C0L5 1744 aa7.58□□□□□ -1.2
RNU4ATAC-201ENST00000580972 ANKRD18BA2A2Z9 1011 aa7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 ADRA2BP18089 450 aa7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 HSP90AB4PQ58FF6 505 aa7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 BMP2KLQ5H9B9 411 aa7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TAF7LQ5H9L4 462 aa7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 PRR5LQ6MZQ0 368 aa7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 EDC3Q96F86 508 aaKnown RBP7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 COL5A3P25940 1745 aaPredicted RBP7.57□□□□□ -1.2
RNU4ATAC-201ENST00000580972 N4BP2Q86UW6 1770 aaPredicted RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 POLRMTO00411 1230 aaKnown RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CHGBP05060 677 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SERPINB2P05120 415 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 IFIT2P09913 472 aaKnown RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 GTF2E1P29083 439 aaPredicted RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TM4SF1P30408 202 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 IL15P40933 162 aaPredicted RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 MFAP1P55081 439 aaKnown RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TIMM10P62072 90 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 METTL24Q5JXM2 366 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 ERC1Q8IUD2 1116 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CLASRPQ8N2M8 674 aaKnown RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CELF1Q92879 486 aaKnown RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 IL25Q9H293 177 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 OSBPL3Q9H4L5 887 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 RIPOR2Q9Y4F9 1068 aa7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 MYH14Q7Z406 1995 aaKnown RBP7.56□□□□□ -1.2
RNU4ATAC-201ENST00000580972 ZNF609O15014 1411 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TAF5LO75529 589 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CIAO1O76071 339 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SLC15A2Q16348 729 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CCDC152Q4G0S7 254 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SLC10A5Q5PT55 438 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 LDHAL6AQ6ZMR3 332 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 VGLL2Q8N8G2 317 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CNBD1Q8NA66 436 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 RILPL2Q969X0 211 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 NEUROD6Q96NK8 337 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 BOLA2Q9H3K6 86 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CNNM1Q9NRU3 951 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 LY75O60449 1722 aa7.55□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SCN7AQ01118 1682 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 ZNF831Q5JPB2 1677 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 A0A1B0GUL7 405 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TRIM6-TRIM34B2RNG4 842 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 RGL2O15211 777 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 NPHP1O15259 732 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CDC45O75419 566 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 MMP10P09238 476 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 KLRK1P26718 216 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 BAG6P46379 1132 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SCARF1Q14162 830 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SF3B3Q15393 1217 aaKnown RBP7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SLFNL1Q499Z3 407 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 PI16Q6UXB8 463 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 NYXQ9GZU5 481 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 ECHDC1Q9NTX5 307 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 STK32BQ9NY57 414 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CEP126Q9P2H0 1117 aa7.54□□□□□ -1.2
RNU4ATAC-201ENST00000580972 AOX1Q06278 1338 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 LRP5O75197 1615 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SBF2Q86WG5 1849 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 CHRNDQ07001 517 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SF3B2Q13435 895 aaKnown RBP7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 ATP2B3Q16720 1220 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TPTE2Q6XPS3 522 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 XAGE2Q96GT9 111 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 GPR101Q96P66 508 aaPredicted RBP7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 SNRKQ9NRH2 765 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 RTL9Q8NET4 1388 aa7.53□□□□□ -1.2
RNU4ATAC-201ENST00000580972 TNS1Q9HBL0 1735 aaKnown RBP7.52□□□□□ -1.2
RNU4ATAC-201ENST00000580972 GLRX3O76003 335 aaKnown RBP7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 FGFR2P21802 821 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms