RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 ATP6V0A2Q9Y487 856 aa16.88■□□□□ 0.29
NUP85-215ENST00000580879 CDHR2Q9BYE9 1310 aa16.88■□□□□ 0.29
NUP85-215ENST00000580879 TAF1P21675 1872 aa16.88■□□□□ 0.29
NUP85-215ENST00000580879 COL4A1P02462 1669 aa16.88■□□□□ 0.29
NUP85-215ENST00000580879 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
NUP85-215ENST00000580879 CCDC88AQ3V6T2 1871 aa16.87■□□□□ 0.29
NUP85-215ENST00000580879 H7C1W4 665 aa16.87■□□□□ 0.29
NUP85-215ENST00000580879 BBOX1O75936 387 aa16.87■□□□□ 0.29
NUP85-215ENST00000580879 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
NUP85-215ENST00000580879 CC2D2BQ6DHV5 1058 aa16.87■□□□□ 0.29
NUP85-215ENST00000580879 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
NUP85-215ENST00000580879 TMX4Q9H1E5 349 aaPredicted RBP16.86■□□□□ 0.29
NUP85-215ENST00000580879 NMRK2Q9NPI5 230 aa16.86■□□□□ 0.29
NUP85-215ENST00000580879 CTSWP56202 376 aa16.85■□□□□ 0.29
NUP85-215ENST00000580879 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
NUP85-215ENST00000580879 CCDC152Q4G0S7 254 aa16.85■□□□□ 0.29
NUP85-215ENST00000580879 SP8Q8IXZ3 490 aa16.85■□□□□ 0.29
NUP85-215ENST00000580879 PSMD1Q99460 953 aa16.85■□□□□ 0.29
NUP85-215ENST00000580879 TIAM2Q8IVF5 1701 aa16.84■□□□□ 0.29
NUP85-215ENST00000580879 IARSP41252 1262 aaKnown RBP16.84■□□□□ 0.29
NUP85-215ENST00000580879 CASP7P55210 303 aa16.84■□□□□ 0.29
NUP85-215ENST00000580879 ZC3H4Q9UPT8 1303 aaKnown RBP16.84■□□□□ 0.29
NUP85-215ENST00000580879 PTPRCP08575 1304 aa16.83■□□□□ 0.28
NUP85-215ENST00000580879 CT47B1P0C2W7 299 aaPredicted RBP16.83■□□□□ 0.28
NUP85-215ENST00000580879 RPS8P62241 208 aaKnown RBP16.83■□□□□ 0.28
NUP85-215ENST00000580879 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.28
NUP85-215ENST00000580879 TTLL11Q8NHH1 800 aa16.83■□□□□ 0.28
NUP85-215ENST00000580879 KDM2BQ8NHM5 1336 aa16.83■□□□□ 0.28
NUP85-215ENST00000580879 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.28
NUP85-215ENST00000580879 GREM2Q9H772 168 aa16.83■□□□□ 0.28
NUP85-215ENST00000580879 GLTPD2A6NH11 291 aa16.82■□□□□ 0.28
NUP85-215ENST00000580879 KIF3CO14782 793 aa16.82■□□□□ 0.28
NUP85-215ENST00000580879 RARSP54136 660 aaKnown RBP16.82■□□□□ 0.28
NUP85-215ENST00000580879 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
NUP85-215ENST00000580879 MPNDQ8N594 471 aa16.82■□□□□ 0.28
NUP85-215ENST00000580879 RRAGCQ9HB90 399 aa16.82■□□□□ 0.28
NUP85-215ENST00000580879 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
NUP85-215ENST00000580879 GRM8O00222 908 aa16.81■□□□□ 0.28
NUP85-215ENST00000580879 ALDH1L1O75891 902 aa16.81■□□□□ 0.28
NUP85-215ENST00000580879 AOC3Q16853 763 aa16.81■□□□□ 0.28
NUP85-215ENST00000580879 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
NUP85-215ENST00000580879 LARGE2Q8N3Y3 721 aa16.81■□□□□ 0.28
NUP85-215ENST00000580879 NOB1Q9ULX3 412 aaKnown RBP16.81■□□□□ 0.28
NUP85-215ENST00000580879 COL4A5P29400 1685 aa16.81■□□□□ 0.28
NUP85-215ENST00000580879 DICER1Q9UPY3 1922 aaKnown RBP16.8■□□□□ 0.28
NUP85-215ENST00000580879 ZNF541Q9H0D2 1346 aa16.8■□□□□ 0.28
NUP85-215ENST00000580879 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
NUP85-215ENST00000580879 GPSM2P81274 684 aa16.8■□□□□ 0.28
NUP85-215ENST00000580879 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
NUP85-215ENST00000580879 PLA2G12BQ9BX93 195 aa16.8■□□□□ 0.28
NUP85-215ENST00000580879 C9orf78Q9NZ63 289 aaPredicted RBP16.8■□□□□ 0.28
NUP85-215ENST00000580879 NSFL1CQ9UNZ2 370 aaKnown RBP16.8■□□□□ 0.28
NUP85-215ENST00000580879 DDNO94850 711 aaPredicted RBP16.79■□□□□ 0.28
NUP85-215ENST00000580879 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
NUP85-215ENST00000580879 ANKRD18AQ8IVF6 992 aa16.79■□□□□ 0.28
NUP85-215ENST00000580879 JDP2Q8WYK2 163 aa16.79■□□□□ 0.28
NUP85-215ENST00000580879 RTFDC1Q9BY42 306 aaPredicted RBP16.79■□□□□ 0.28
NUP85-215ENST00000580879 C1QTNF8P60827 252 aa16.78■□□□□ 0.28
NUP85-215ENST00000580879 FOXO4P98177 505 aa16.78■□□□□ 0.28
NUP85-215ENST00000580879 EPHA10Q5JZY3 1008 aa16.78■□□□□ 0.28
NUP85-215ENST00000580879 SUPT20HQ8NEM7 779 aa16.78■□□□□ 0.28
NUP85-215ENST00000580879 GPR101Q96P66 508 aaPredicted RBP16.78■□□□□ 0.28
NUP85-215ENST00000580879 CDC5LQ99459 802 aaKnown RBP16.78■□□□□ 0.28
NUP85-215ENST00000580879 LRRC37AA6NMS7 1700 aa16.78■□□□□ 0.28
NUP85-215ENST00000580879 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.28
NUP85-215ENST00000580879 FZD9O00144 591 aa16.77■□□□□ 0.28
NUP85-215ENST00000580879 CSF1RP07333 972 aa16.77■□□□□ 0.28
NUP85-215ENST00000580879 NBPF7P0C2Y1 421 aaPredicted RBP16.77■□□□□ 0.28
NUP85-215ENST00000580879 ITGA6P23229 1130 aa16.77■□□□□ 0.28
NUP85-215ENST00000580879 SUCLG2Q96I99 432 aa16.77■□□□□ 0.28
NUP85-215ENST00000580879 POLLQ9UGP5 575 aa16.77■□□□□ 0.28
NUP85-215ENST00000580879 CHMP3Q9Y3E7 222 aa16.77■□□□□ 0.28
NUP85-215ENST00000580879 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
NUP85-215ENST00000580879 MYH3P11055 1940 aa16.76■□□□□ 0.27
NUP85-215ENST00000580879 C6orf229H3BNL8 230 aa16.76■□□□□ 0.27
NUP85-215ENST00000580879 BCAR3O75815 825 aa16.76■□□□□ 0.27
NUP85-215ENST00000580879 LMBR1LQ6UX01 489 aa16.76■□□□□ 0.27
NUP85-215ENST00000580879 NIM1KQ8IY84 436 aa16.76■□□□□ 0.27
NUP85-215ENST00000580879 ANKIB1Q9P2G1 1089 aa16.76■□□□□ 0.27
NUP85-215ENST00000580879 POTECB2RU33 542 aa16.75■□□□□ 0.27
NUP85-215ENST00000580879 RIMBP2O15034 1052 aa16.75■□□□□ 0.27
NUP85-215ENST00000580879 BRPF1P55201 1214 aaPredicted RBP16.75■□□□□ 0.27
NUP85-215ENST00000580879 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
NUP85-215ENST00000580879 TBC1D16Q8TBP0 767 aa16.75■□□□□ 0.27
NUP85-215ENST00000580879 API5Q9BZZ5 524 aaKnown RBP16.75■□□□□ 0.27
NUP85-215ENST00000580879 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
NUP85-215ENST00000580879 UFL1O94874 794 aa16.74■□□□□ 0.27
NUP85-215ENST00000580879 VEGFAP15692 232 aaPredicted RBP16.74■□□□□ 0.27
NUP85-215ENST00000580879 IGHMBP2P38935 993 aaKnown RBP16.74■□□□□ 0.27
NUP85-215ENST00000580879 EIF6P56537 245 aaKnown RBP16.74■□□□□ 0.27
NUP85-215ENST00000580879 C16orf71Q8IYS4 520 aaPredicted RBP16.74■□□□□ 0.27
NUP85-215ENST00000580879 FRAT1Q92837 279 aaPredicted RBP16.74■□□□□ 0.27
NUP85-215ENST00000580879 KAZALD1Q96I82 304 aa16.74■□□□□ 0.27
NUP85-215ENST00000580879 BSDC1Q9NW68 430 aaPredicted RBP16.74■□□□□ 0.27
NUP85-215ENST00000580879 UTYO14607 1347 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 ANKRD18BA2A2Z9 1011 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
NUP85-215ENST00000580879 IFIT5Q13325 482 aaKnown RBP16.73■□□□□ 0.27
NUP85-215ENST00000580879 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms