RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 EPS15P42566 896 aa11.9□□□□□ -0.5
CDK5RAP3-211ENST00000578996 SCNN1DP51172 638 aa11.9□□□□□ -0.5
CDK5RAP3-211ENST00000578996 CNTROBQ8N137 903 aa11.9□□□□□ -0.5
CDK5RAP3-211ENST00000578996 C8orf58Q8NAV2 365 aa11.9□□□□□ -0.5
CDK5RAP3-211ENST00000578996 MYD88Q99836 296 aa11.9□□□□□ -0.5
CDK5RAP3-211ENST00000578996 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
CDK5RAP3-211ENST00000578996 IRS4O14654 1257 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
CDK5RAP3-211ENST00000578996 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
CDK5RAP3-211ENST00000578996 DDX60Q8IY21 1712 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-211ENST00000578996 RAD17O75943 681 aa11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ZEB1P37275 1124 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 COL13A1Q5TAT6 717 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CELF1Q92879 486 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 RTFDC1Q9BY42 306 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 VPS33BQ9H267 617 aa11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 PCNTO95613 3336 aa11.88□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ADAMTSL1Q8N6G6 1762 aa11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ANP32CO43423 234 aa11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 DDX58O95786 925 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CXCL9Q07325 125 aa11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 SF3B3Q15393 1217 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CIAPIN1Q6FI81 312 aa11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 USP50Q70EL3 339 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ZBTB38Q8NAP3 1195 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 JARID2Q92833 1246 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 MRS2Q9HD23 443 aa11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ABT1Q9ULW3 272 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CNTNAP1P78357 1384 aa11.87□□□□□ -0.51
CDK5RAP3-211ENST00000578996 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 RIMBP2O15034 1052 aa11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 PAXIP1Q6ZW49 1069 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ADARB2Q9NS39 739 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CWC25Q9NXE8 425 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 GPRC5DQ9NZD1 345 aa11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TAF1P21675 1872 aa11.86□□□□□ -0.51
CDK5RAP3-211ENST00000578996 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 GPSM2P81274 684 aa11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TRIM28Q13263 835 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TNIP1Q15025 636 aa11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CCDC191Q8NCU4 936 aa11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 GPR101Q96P66 508 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 DBNDD1Q9H9R9 158 aa11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 MAP3K2Q9Y2U5 619 aa11.85□□□□□ -0.51
CDK5RAP3-211ENST00000578996 DUOX1Q9NRD9 1551 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 YDJCA8MPS7 323 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TRAF5O00463 557 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CAPN15O75808 1086 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 VEGFBP49765 207 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 GRM1Q13255 1194 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 DEFB115Q30KQ5 88 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TWISTNBQ3B726 338 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 CCDC152Q4G0S7 254 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 METTL22Q9BUU2 404 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 COL4A1P02462 1669 aa11.84□□□□□ -0.51
CDK5RAP3-211ENST00000578996 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 G3V3G9 751 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 PDE8AO60658 829 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 PCCAP05165 728 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CCDC27Q2M243 656 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 EYA3Q99504 573 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 ANKIB1Q9P2G1 1089 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-211ENST00000578996 SHTN1A0MZ66 631 aa11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 PSMD14O00487 310 aa11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 ECE2O60344 883 aa11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 UFL1O94874 794 aa11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 KSR2Q6VAB6 950 aa11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 ZNF408Q9H9D4 720 aa11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CDHR2Q9BYE9 1310 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms