RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 CHMP3Q9Y3E7 222 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 ZKSCAN1P17029 563 aaPredicted RBP11.56□□□□□ -0.56
BPTF-211ENST00000578307 ATP5JP18859 108 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 KCNJ4P48050 445 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 PTH1RQ03431 593 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 TTC14Q96N46 770 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 TEX13AQ9BXU3 409 aaPredicted RBP11.56□□□□□ -0.56
BPTF-211ENST00000578307 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 BTG4Q9NY30 223 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 ITGB4P16144 1822 aa11.55□□□□□ -0.56
BPTF-211ENST00000578307 CASTP20810 708 aaKnown RBP11.55□□□□□ -0.56
BPTF-211ENST00000578307 FOXO4P98177 505 aa11.55□□□□□ -0.56
BPTF-211ENST00000578307 PRPF40BQ6NWY9 871 aaKnown RBP11.55□□□□□ -0.56
BPTF-211ENST00000578307 TRIM44Q96DX7 344 aaPredicted RBP11.55□□□□□ -0.56
BPTF-211ENST00000578307 FAM227BQ96M60 508 aa11.55□□□□□ -0.56
BPTF-211ENST00000578307 SNRKQ9NRH2 765 aa11.55□□□□□ -0.56
BPTF-211ENST00000578307 BCCIPQ9P287 314 aaKnown RBP eCLIP11.55□□□□□ -0.56
BPTF-211ENST00000578307 DBNLQ9UJU6 430 aaKnown RBP11.55□□□□□ -0.56
BPTF-211ENST00000578307 BRD1O95696 1058 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 AK2P54819 239 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 KCNB2Q92953 911 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 LMBRD1Q9NUN5 540 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 LIMCH1Q9UPQ0 1083 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 MAP4K1Q92918 833 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 JAKMIP1Q96N16 626 aaKnown RBP11.54□□□□□ -0.56
BPTF-211ENST00000578307 GRPEL1Q9HAV7 217 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 RBM8AQ9Y5S9 174 aaKnown RBP11.54□□□□□ -0.56
BPTF-211ENST00000578307 CYP46A1Q9Y6A2 500 aa11.54□□□□□ -0.56
BPTF-211ENST00000578307 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 DYNC1I1O14576 645 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 SLC20A2Q08357 652 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 VPS53Q5VIR6 699 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 RNF20Q5VTR2 975 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
BPTF-211ENST00000578307 MED23Q9ULK4 1368 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 A0A0D9SFI3 127 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 PRPF40AO75400 957 aaKnown RBP11.53□□□□□ -0.56
BPTF-211ENST00000578307 IL15P40933 162 aaPredicted RBP11.53□□□□□ -0.56
BPTF-211ENST00000578307 FOXD4L5Q5VV16 416 aaPredicted RBP11.53□□□□□ -0.56
BPTF-211ENST00000578307 CREB3L3Q68CJ9 461 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 KIF6Q6ZMV9 814 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 FOXD4L4Q8WXT5 416 aaPredicted RBP11.53□□□□□ -0.56
BPTF-211ENST00000578307 DBNDD2Q9BQY9 259 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
BPTF-211ENST00000578307 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
BPTF-211ENST00000578307 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.56
BPTF-211ENST00000578307 PLCH1Q4KWH8 1693 aa11.52□□□□□ -0.56
BPTF-211ENST00000578307 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.56
BPTF-211ENST00000578307 STARD3NLO95772 234 aa11.52□□□□□ -0.57
BPTF-211ENST00000578307 ZSCAN20P17040 1043 aaPredicted RBP11.52□□□□□ -0.57
BPTF-211ENST00000578307 PSMA5P28066 241 aa11.52□□□□□ -0.57
BPTF-211ENST00000578307 RUFY3Q7L099 469 aa11.52□□□□□ -0.57
BPTF-211ENST00000578307 PIGBQ92521 554 aa11.52□□□□□ -0.57
BPTF-211ENST00000578307 ZSCAN31Q96LW9 406 aaPredicted RBP11.52□□□□□ -0.57
BPTF-211ENST00000578307 ISCA1Q9BUE6 129 aa11.52□□□□□ -0.57
BPTF-211ENST00000578307 GPR108Q9NPR9 543 aa11.52□□□□□ -0.57
BPTF-211ENST00000578307 ATG3Q9NT62 314 aa11.52□□□□□ -0.57
BPTF-211ENST00000578307 TCIRG1Q13488 830 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 ADCK5Q3MIX3 580 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 DNAJC10Q8IXB1 793 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 DNAJC2Q99543 621 aaKnown RBP11.51□□□□□ -0.57
BPTF-211ENST00000578307 HAUS7Q99871 368 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 CCDC94Q9BW85 323 aaPredicted RBP11.51□□□□□ -0.57
BPTF-211ENST00000578307 ZHX1Q9UKY1 873 aaPredicted RBP11.51□□□□□ -0.57
BPTF-211ENST00000578307 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 LRP6O75581 1613 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 COL22A1Q8NFW1 1626 aaPredicted RBP11.51□□□□□ -0.57
BPTF-211ENST00000578307 DISP2A7MBM2 1401 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 SLC27A2O14975 620 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 CPA1P15085 419 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 ZFP91Q96JP5 570 aaPredicted RBP11.51□□□□□ -0.57
BPTF-211ENST00000578307 NEUROD6Q96NK8 337 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 SH2B1Q9NRF2 756 aaPredicted RBP11.51□□□□□ -0.57
BPTF-211ENST00000578307 HMG20BQ9P0W2 317 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 WNK3Q9BYP7 1800 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 JCADQ9P266 1359 aa11.51□□□□□ -0.57
BPTF-211ENST00000578307 EYA2O00167 538 aa11.5□□□□□ -0.57
BPTF-211ENST00000578307 CIAO1O76071 339 aa11.5□□□□□ -0.57
BPTF-211ENST00000578307 EDC3Q96F86 508 aaKnown RBP11.5□□□□□ -0.57
BPTF-211ENST00000578307 SMC3Q9UQE7 1217 aa11.5□□□□□ -0.57
BPTF-211ENST00000578307 AHDC1Q5TGY3 1603 aaPredicted RBP11.5□□□□□ -0.57
BPTF-211ENST00000578307 RPAP1Q9BWH6 1393 aaPredicted RBP11.5□□□□□ -0.57
BPTF-211ENST00000578307 TRIM28Q13263 835 aaKnown RBP11.5□□□□□ -0.57
BPTF-211ENST00000578307 CAVIN1Q6NZI2 390 aaKnown RBP11.5□□□□□ -0.57
BPTF-211ENST00000578307 HOMEZQ8IX15 550 aa11.5□□□□□ -0.57
BPTF-211ENST00000578307 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
BPTF-211ENST00000578307 EXOC5O00471 708 aa11.49□□□□□ -0.57
BPTF-211ENST00000578307 MBD3O95983 291 aa11.49□□□□□ -0.57
BPTF-211ENST00000578307 CCDC57Q2TAC2 916 aa11.49□□□□□ -0.57
BPTF-211ENST00000578307 ZNF589Q86UQ0 364 aaPredicted RBP11.49□□□□□ -0.57
BPTF-211ENST00000578307 GAS2L3Q86XJ1 694 aa11.49□□□□□ -0.57
BPTF-211ENST00000578307 PANK2Q9BZ23 570 aa11.49□□□□□ -0.57
BPTF-211ENST00000578307 ZNF609O15014 1411 aa11.49□□□□□ -0.57
BPTF-211ENST00000578307 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.49□□□□□ -0.57
BPTF-211ENST00000578307 TAF5LO75529 589 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms