RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
SMARCD2-207ENST00000578234 CTCFP49711 727 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-207ENST00000578234 DPP8Q6V1X1 898 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-207ENST00000578234 ANKRD13DQ6ZTN6 518 aa16.35■□□□□ 0.21
SMARCD2-207ENST00000578234 MPNDQ8N594 471 aa16.35■□□□□ 0.21
SMARCD2-207ENST00000578234 LTBP1Q14766 1721 aa16.35■□□□□ 0.21
SMARCD2-207ENST00000578234 LAMB2P55268 1798 aa16.35■□□□□ 0.21
SMARCD2-207ENST00000578234 LBX1P52954 281 aa16.34■□□□□ 0.21
SMARCD2-207ENST00000578234 GRAPQ13588 217 aa16.34■□□□□ 0.21
SMARCD2-207ENST00000578234 TMC4Q7Z404 712 aa16.34■□□□□ 0.21
SMARCD2-207ENST00000578234 GRAPLQ8TC17 118 aaPredicted RBP16.34■□□□□ 0.21
SMARCD2-207ENST00000578234 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
SMARCD2-207ENST00000578234 GPRC5DQ9NZD1 345 aa16.34■□□□□ 0.21
SMARCD2-207ENST00000578234 FMR1Q06787 632 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMARCD2-207ENST00000578234 CXCL9Q07325 125 aa16.33■□□□□ 0.2
SMARCD2-207ENST00000578234 KIAA2012Q0VF49 1180 aa16.33■□□□□ 0.2
SMARCD2-207ENST00000578234 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
SMARCD2-207ENST00000578234 BEGAINQ9BUH8 593 aa16.33■□□□□ 0.2
SMARCD2-207ENST00000578234 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
SMARCD2-207ENST00000578234 PRKRIP1Q9H875 184 aaPredicted RBP16.33■□□□□ 0.2
SMARCD2-207ENST00000578234 DUSP27Q5VZP5 1158 aa16.32■□□□□ 0.2
SMARCD2-207ENST00000578234 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
SMARCD2-207ENST00000578234 ADARB2Q9NS39 739 aaKnown RBP16.32■□□□□ 0.2
SMARCD2-207ENST00000578234 TRIM28Q13263 835 aaKnown RBP16.31■□□□□ 0.2
SMARCD2-207ENST00000578234 TNIP1Q15025 636 aa16.31■□□□□ 0.2
SMARCD2-207ENST00000578234 SF3B3Q15393 1217 aaKnown RBP16.31■□□□□ 0.2
SMARCD2-207ENST00000578234 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
SMARCD2-207ENST00000578234 ZNF408Q9H9D4 720 aa16.31■□□□□ 0.2
SMARCD2-207ENST00000578234 PRDM10Q9NQV6 1147 aa16.31■□□□□ 0.2
SMARCD2-207ENST00000578234 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
SMARCD2-207ENST00000578234 WBP1LQ9NX94 342 aa16.31■□□□□ 0.2
SMARCD2-207ENST00000578234 CDHR2Q9BYE9 1310 aa16.3■□□□□ 0.2
SMARCD2-207ENST00000578234 TRAF5O00463 557 aa16.3■□□□□ 0.2
SMARCD2-207ENST00000578234 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
SMARCD2-207ENST00000578234 CIAPIN1Q6FI81 312 aa16.3■□□□□ 0.2
SMARCD2-207ENST00000578234 TAF1P21675 1872 aa16.3■□□□□ 0.2
SMARCD2-207ENST00000578234 ATP5J2-PTCD1G3V325 749 aa16.29■□□□□ 0.2
SMARCD2-207ENST00000578234 RAD17O75943 681 aa16.29■□□□□ 0.2
SMARCD2-207ENST00000578234 GMPSP49915 693 aaPredicted RBP16.29■□□□□ 0.2
SMARCD2-207ENST00000578234 DDX60Q8IY21 1712 aaKnown RBP16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 GNAI1P63096 354 aa16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 MAP2K1Q02750 393 aaPredicted RBP16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 CALD1Q05682 793 aaKnown RBP16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 CST9Q5W186 159 aa16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 CYP4F22Q6NT55 531 aa16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 CAPNS2Q96L46 248 aa16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 PGAP2Q9UHJ9 254 aa16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 LRRC37AA6NMS7 1700 aa16.28■□□□□ 0.2
SMARCD2-207ENST00000578234 TRPM7Q96QT4 1865 aa16.27■□□□□ 0.2
SMARCD2-207ENST00000578234 APAF1O14727 1248 aa16.27■□□□□ 0.2
SMARCD2-207ENST00000578234 ECE1P42892 770 aa16.27■□□□□ 0.2
SMARCD2-207ENST00000578234 WASHC4Q2M389 1173 aa16.27■□□□□ 0.2
SMARCD2-207ENST00000578234 ZC3H15Q8WU90 426 aaKnown RBP16.27■□□□□ 0.2
SMARCD2-207ENST00000578234 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
SMARCD2-207ENST00000578234 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 YDJCA8MPS7 323 aa16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 IRS4O14654 1257 aaPredicted RBP16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 RIMBP2O15034 1052 aa16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 RIC3Q7Z5B4 369 aa16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 GPR101Q96P66 508 aaPredicted RBP16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 CNOT7Q9UIV1 285 aaKnown RBP16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 TSKSQ9UJT2 592 aa16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
SMARCD2-207ENST00000578234 ANP32CO43423 234 aa16.25■□□□□ 0.19
SMARCD2-207ENST00000578234 CELF2O95319 508 aaKnown RBP16.25■□□□□ 0.19
SMARCD2-207ENST00000578234 HSP90B1P14625 803 aaKnown RBP16.25■□□□□ 0.19
SMARCD2-207ENST00000578234 RPS8P62241 208 aaKnown RBP16.25■□□□□ 0.19
SMARCD2-207ENST00000578234 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
SMARCD2-207ENST00000578234 CHMP4AQ9BY43 222 aa16.25■□□□□ 0.19
SMARCD2-207ENST00000578234 PHAXQ9H814 394 aaKnown RBP16.25■□□□□ 0.19
SMARCD2-207ENST00000578234 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
SMARCD2-207ENST00000578234 G3V3G9 751 aa16.24■□□□□ 0.19
SMARCD2-207ENST00000578234 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
SMARCD2-207ENST00000578234 ELL2O00472 640 aaPredicted RBP16.24■□□□□ 0.19
SMARCD2-207ENST00000578234 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
SMARCD2-207ENST00000578234 HIRAP54198 1017 aaPredicted RBP16.24■□□□□ 0.19
SMARCD2-207ENST00000578234 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
SMARCD2-207ENST00000578234 DPF2Q92785 391 aa16.24■□□□□ 0.19
SMARCD2-207ENST00000578234 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
SMARCD2-207ENST00000578234 H7C1D1 291 aa16.23■□□□□ 0.19
SMARCD2-207ENST00000578234 AOC2O75106 756 aa16.23■□□□□ 0.19
SMARCD2-207ENST00000578234 GPSM2P81274 684 aa16.23■□□□□ 0.19
SMARCD2-207ENST00000578234 RBM26Q5T8P6 1007 aaKnown RBP16.23■□□□□ 0.19
SMARCD2-207ENST00000578234 CDC37L1Q7L3B6 337 aa16.23■□□□□ 0.19
SMARCD2-207ENST00000578234 SAPCD2Q86UD0 394 aa16.23■□□□□ 0.19
SMARCD2-207ENST00000578234 CCDC191Q8NCU4 936 aa16.23■□□□□ 0.19
SMARCD2-207ENST00000578234 POLLQ9UGP5 575 aa16.23■□□□□ 0.19
SMARCD2-207ENST00000578234 CCDC85CA6NKD9 419 aa16.22■□□□□ 0.19
SMARCD2-207ENST00000578234 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
SMARCD2-207ENST00000578234 TRPM4Q8TD43 1214 aa16.22■□□□□ 0.19
SMARCD2-207ENST00000578234 HHIPL1Q96JK4 782 aa16.22■□□□□ 0.19
SMARCD2-207ENST00000578234 EYA3Q99504 573 aa16.22■□□□□ 0.19
SMARCD2-207ENST00000578234 PODXL2Q9NZ53 605 aa16.22■□□□□ 0.19
SMARCD2-207ENST00000578234 PSMD14O00487 310 aa16.21■□□□□ 0.19
SMARCD2-207ENST00000578234 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
SMARCD2-207ENST00000578234 MAP2K2P36507 400 aa16.21■□□□□ 0.19
SMARCD2-207ENST00000578234 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms