RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
CDK5RAP3-205ENST00000577802 NOP58Q9Y2X3 529 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-205ENST00000577802 ANKRD18BA2A2Z9 1011 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 CSF1RP07333 972 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 TM4SF1P30408 202 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 NUCB1Q02818 461 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 EPHA10Q5JZY3 1008 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 JARID2Q92833 1246 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 LRRCC1Q9C099 1032 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
CDK5RAP3-205ENST00000577802 ABCC12Q96J65 1359 aa16.42■□□□□ 0.22
CDK5RAP3-205ENST00000577802 SERPINB2P05120 415 aa16.42■□□□□ 0.22
CDK5RAP3-205ENST00000577802 ERFEQ4G0M1 354 aa16.42■□□□□ 0.22
CDK5RAP3-205ENST00000577802 NUTM1Q86Y26 1132 aa16.42■□□□□ 0.22
CDK5RAP3-205ENST00000577802 TTLL11Q8NHH1 800 aa16.42■□□□□ 0.22
CDK5RAP3-205ENST00000577802 NLRP3Q96P20 1036 aa16.42■□□□□ 0.22
CDK5RAP3-205ENST00000577802 TNRC6CQ9HCJ0 1690 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-205ENST00000577802 POLRMTO00411 1230 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-205ENST00000577802 CIAO1O76071 339 aa16.41■□□□□ 0.22
CDK5RAP3-205ENST00000577802 FAM161AQ3B820 660 aa16.41■□□□□ 0.22
CDK5RAP3-205ENST00000577802 ANKRD45Q5TZF3 282 aa16.41■□□□□ 0.22
CDK5RAP3-205ENST00000577802 CHD1LQ86WJ1 897 aa16.41■□□□□ 0.22
CDK5RAP3-205ENST00000577802 CDC5LQ99459 802 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-205ENST00000577802 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
CDK5RAP3-205ENST00000577802 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-205ENST00000577802 SF3B3Q15393 1217 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-205ENST00000577802 PDZRN3Q9UPQ7 1066 aa16.4■□□□□ 0.22
CDK5RAP3-205ENST00000577802 MMP10P09238 476 aa16.39■□□□□ 0.21
CDK5RAP3-205ENST00000577802 ITGA6P23229 1130 aa16.39■□□□□ 0.21
CDK5RAP3-205ENST00000577802 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-205ENST00000577802 PTPN12Q05209 780 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-205ENST00000577802 DDR1Q08345 913 aa16.39■□□□□ 0.21
CDK5RAP3-205ENST00000577802 PRR5LQ6MZQ0 368 aa16.39■□□□□ 0.21
CDK5RAP3-205ENST00000577802 IGHMBP2P38935 993 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-205ENST00000577802 IL15P40933 162 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-205ENST00000577802 GREM2Q9H772 168 aa16.38■□□□□ 0.21
CDK5RAP3-205ENST00000577802 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
CDK5RAP3-205ENST00000577802 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-205ENST00000577802 RHPN1Q8TCX5 695 aa16.37■□□□□ 0.21
CDK5RAP3-205ENST00000577802 RPGRQ92834 1020 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-205ENST00000577802 GPATCH3Q96I76 525 aa16.37■□□□□ 0.21
CDK5RAP3-205ENST00000577802 SPEF2Q9C093 1822 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 EYA2O00167 538 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 APBB1O00213 710 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 PDE6BP35913 854 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 MSL1Q68DK7 614 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 BRIP1Q9BX63 1249 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 SIL1Q9H173 461 aa16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-205ENST00000577802 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-205ENST00000577802 POLD1P28340 1107 aa16.35■□□□□ 0.21
CDK5RAP3-205ENST00000577802 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
CDK5RAP3-205ENST00000577802 ANKRD18AQ8IVF6 992 aa16.35■□□□□ 0.21
CDK5RAP3-205ENST00000577802 MTFR1LQ9H019 292 aa16.35■□□□□ 0.21
CDK5RAP3-205ENST00000577802 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
CDK5RAP3-205ENST00000577802 MROH5Q6ZUA9 1318 aa16.35■□□□□ 0.21
CDK5RAP3-205ENST00000577802 ANKRD31Q8N7Z5 1873 aa16.34■□□□□ 0.21
CDK5RAP3-205ENST00000577802 CCDC85AQ96PX6 553 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-205ENST00000577802 GPR108Q9NPR9 543 aa16.34■□□□□ 0.21
CDK5RAP3-205ENST00000577802 AKAP2Q9Y2D5 859 aa16.34■□□□□ 0.21
CDK5RAP3-205ENST00000577802 RGS3P49796 1198 aa16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 CRY2Q49AN0 593 aa16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 TMC4Q7Z404 712 aa16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 AOX1Q06278 1338 aa16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 ZNF609O15014 1411 aa16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 ARAP2Q8WZ64 1704 aa16.33■□□□□ 0.2
CDK5RAP3-205ENST00000577802 IFIT2P09913 472 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-205ENST00000577802 KLHDC4Q8TBB5 520 aa16.32■□□□□ 0.2
CDK5RAP3-205ENST00000577802 A0A1B0GUL6 1792 aa16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 COL11A2P13942 1736 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 MX1P20591 662 aa16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 GRAPQ13588 217 aa16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 R3HDM1Q15032 1099 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 METTL24Q5JXM2 366 aa16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 GRAPLQ8TC17 118 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
CDK5RAP3-205ENST00000577802 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 SASH1O94885 1247 aa16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 ATG9AQ7Z3C6 839 aa16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 AACSQ86V21 672 aa16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 ZNF594Q96JF6 807 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 IL1RAPL2Q9NP60 686 aa16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 KIF13BQ9NQT8 1826 aa16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 LRRC37AA6NMS7 1700 aa16.3■□□□□ 0.2
CDK5RAP3-205ENST00000577802 ERC2O15083 957 aa16.29■□□□□ 0.2
CDK5RAP3-205ENST00000577802 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-205ENST00000577802 NPR1P16066 1061 aa16.29■□□□□ 0.2
CDK5RAP3-205ENST00000577802 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms